| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299781
Identifier: 134299781
GI number: 134299781
Start: 2121921
End: 2122676
Strand: Reverse
Name: 134299781
Synonym: Dred_1932
Alternate gene names: NA
Gene position: 2122676-2121921 (Counterclockwise)
Preceding gene: 134299782
Following gene: 134299780
Centisome position: 58.83
GC content: 40.21
Gene sequence:
>756_bases GTGGCAGTAGGGGAAGCTTTAAGGAGCGCAAGAAAAGAAAAGGGTTACTCGTTTGAATACTTAGAAGAGGCAACCAAGAT TAGAGCGAAATATCTTGAAGCCTTAGAAAATGAAGAATTTGATATTTTGCCTGGGCCTGTGTATGCAAAGGCCTTCTTAA GAACCTATGCAAAATATCTTGAGATTAATACAGAAGAAATCATGGAAGAATATGGCCAAATCACACAGGATAATCAACCT CCTGTTGAAGAAAAAAAACAAGCTGACCCAGAACCTGTTATTTCAGGGAACAAAATGTGGAGATATGTTGCAGCAGGACT GGCCATTGTATCATTGCTAGCCTTTAACACCTTTTATAATAACAGTGGTCAAACAAAAGATAACAAGCCGGATTTACCTA AGACAGCACAGGATAATTTAAATAGTTCAGCAGAAAAGACACCTAGTCAAATTAATGTACCCACAAAACCCCGCACCCCA CAGGAAATGGATGGGGTAAGGGTTGTTTTGAAAGTTACTGAAAAACAAAGTTGGATGCAAGTTGAAGCGGATGGTAATAC CGTCTTTAGTGGTTTGGTAGGAGCAGGGGAAATGAAAGACTTTAAAGCTCAGGAGAAGATCTTTCTTCATGTGGGAAATG CCGGTGTAGTAGAAGTGAATGTCAACGGAAAGAACCTTGGCCGTCTCGGAGAAAATGGTAAGGTTGTAAGAATACCATTT AACGCTGGCGAAGATCCTAAATTAACACAGGGATAG
Upstream 100 bases:
>100_bases GTTGATTGTGATGATTTAAATGAAGCCACAGGTATAATTGCGAATTGGGTAACATCTTTACCCGAGTATGGTATACCAGC GAAAATCGGAGGTGACGATG
Downstream 100 bases:
>100_bases GGGAGACTAAGCTCCTTATTCATCTTTAACAAGGGCTTTACAGTTGGGACACCTTTCTGGATTTCCTTCGTAGAAAATTC CGCAATGGGGACATTTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; XRE Family Transcriptional Regulator; Transcriptional Regulator Xre Family; Helix-Turn-Helix; Helix-Turn-Helix Domain-Containing Protein
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MAVGEALRSARKEKGYSFEYLEEATKIRAKYLEALENEEFDILPGPVYAKAFLRTYAKYLEINTEEIMEEYGQITQDNQP PVEEKKQADPEPVISGNKMWRYVAAGLAIVSLLAFNTFYNNSGQTKDNKPDLPKTAQDNLNSSAEKTPSQINVPTKPRTP QEMDGVRVVLKVTEKQSWMQVEADGNTVFSGLVGAGEMKDFKAQEKIFLHVGNAGVVEVNVNGKNLGRLGENGKVVRIPF NAGEDPKLTQG
Sequences:
>Translated_251_residues MAVGEALRSARKEKGYSFEYLEEATKIRAKYLEALENEEFDILPGPVYAKAFLRTYAKYLEINTEEIMEEYGQITQDNQP PVEEKKQADPEPVISGNKMWRYVAAGLAIVSLLAFNTFYNNSGQTKDNKPDLPKTAQDNLNSSAEKTPSQINVPTKPRTP QEMDGVRVVLKVTEKQSWMQVEADGNTVFSGLVGAGEMKDFKAQEKIFLHVGNAGVVEVNVNGKNLGRLGENGKVVRIPF NAGEDPKLTQG >Mature_250_residues AVGEALRSARKEKGYSFEYLEEATKIRAKYLEALENEEFDILPGPVYAKAFLRTYAKYLEINTEEIMEEYGQITQDNQPP VEEKKQADPEPVISGNKMWRYVAAGLAIVSLLAFNTFYNNSGQTKDNKPDLPKTAQDNLNSSAEKTPSQINVPTKPRTPQ EMDGVRVVLKVTEKQSWMQVEADGNTVFSGLVGAGEMKDFKAQEKIFLHVGNAGVVEVNVNGKNLGRLGENGKVVRIPFN AGEDPKLTQG
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27862; Mature: 27731
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVGEALRSARKEKGYSFEYLEEATKIRAKYLEALENEEFDILPGPVYAKAFLRTYAKYL CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH EINTEEIMEEYGQITQDNQPPVEEKKQADPEPVISGNKMWRYVAAGLAIVSLLAFNTFYN CCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC NSGQTKDNKPDLPKTAQDNLNSSAEKTPSQINVPTKPRTPQEMDGVRVVLKVTEKQSWMQ CCCCCCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCHHCCEEEEEEEECCCCEEE VEADGNTVFSGLVGAGEMKDFKAQEKIFLHVGNAGVVEVNVNGKNLGRLGENGKVVRIPF EECCCCEEEHHHCCCCCHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEC NAGEDPKLTQG CCCCCCCCCCC >Mature Secondary Structure AVGEALRSARKEKGYSFEYLEEATKIRAKYLEALENEEFDILPGPVYAKAFLRTYAKYL CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH EINTEEIMEEYGQITQDNQPPVEEKKQADPEPVISGNKMWRYVAAGLAIVSLLAFNTFYN CCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC NSGQTKDNKPDLPKTAQDNLNSSAEKTPSQINVPTKPRTPQEMDGVRVVLKVTEKQSWMQ CCCCCCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCHHCCEEEEEEEECCCCEEE VEADGNTVFSGLVGAGEMKDFKAQEKIFLHVGNAGVVEVNVNGKNLGRLGENGKVVRIPF EECCCCEEEHHHCCCCCHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEC NAGEDPKLTQG CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA