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The map label for this gene is ynbB [H]

Identifier: 134299730

GI number: 134299730

Start: 2063403

End: 2064644

Strand: Reverse

Name: ynbB [H]

Synonym: Dred_1879

Alternate gene names: 134299730

Gene position: 2064644-2063403 (Counterclockwise)

Preceding gene: 134299731

Following gene: 134299729

Centisome position: 57.22

GC content: 47.18

Gene sequence:

>1242_bases
ATGCATCTAGATATTTTGGACAAGTTAGCCAATGAAGTAGAAATGGAAGTACAGTCTGTATATCGAGAAATTGAAGCCAG
AGCAATGACCAATCATCAGAGGGTACTGAAGGGTTTTCATCTGGCCAAGACTTCCGACTACCATTTGCGGGGAACAACTG
GCTATGGTTATAACGATACTGGCCGTGAGGCCCTGGAAAAAATATATGCCCATATTTTCGGAGCCGAAGCAGCACTGGTA
AGGGGCCAAATTGTCTCAGGGACCCACGCCATAGCCATTGCCTTGTTTGGTATGTTAAGACCTGGCGATGAGTTGTTGGC
GGTACAAGGATCACCCTATGATACCCTGGAGGAAATTATTGGTAAAAGGGGTAATGCACCGGGTTCGCTAAAAGATCTAG
GGATTAGTTACAATCAGGTAGAACTGACACCGGAGGGAACGCTGGATTGGGAAGGTATCGAAGCAGCATTAAACCCCCGA
ACAAGAGTTATGCTTGTTCAAAGGTCCAGGGGTTATGCCTGGCGCCCTTCCTTAACTATGGCAGAACTTCAAAAGCTAAT
CAATTATATCAAAAAACGCGCTCCCCAGGTTTATGTATTTGTTGATAATTGTTACGGAGAATTAGTGGAAACGCTGGAAC
CCACGGCCATAGGAGCTGATTTAATTGCCGGTTCTCTAATGAAAAACCCCGGAGGGGGATTAGCTCCAACCGGCGGGTAT
GTTGCGGGTCGTAAAGATTTGGTGGAACGGGCCGCGAATCGTTGGACAGCACCCGGTATTGGGGCTGAGGTTGGTCCATC
CCTTGGGCATCAAGGACTGCTGTTTCAAGGGATCTTTCTTGCTCCCCATATTGTTGCCGAGGCACTAAAGGGAGCAGTAT
TTGCGGCTAGGCTATTTGAACGGTTAGGATTTAAGGTCTCTCCGGCCTATGATGAACAAAGATCAGATATTATTCAAGCC
ATTGCATTGGAATCCCCGGAGAGATTAGTGGCCTTCTGCAGAGGAATTCAAGGAGCCTCCCCGGTGGATGCTCATGCTTT
GCCGGAACCAGACTATATGCCTGGTTATGAAGACGATGTTATCATGGCTGCAGGAACCTTTGTACAAGGTGCATCCTTGG
AATTAACTGCGGACGCACCGTTACGGCAGCCCTATGCGGTATATCTGCAAGGTGGTCTGTCAAAGGAATATGTACGGATT
GGGGTTATTAACGCAGCCAAAAATGTTTTAAAAATAAAATAG

Upstream 100 bases:

>100_bases
GGCAGGACCTAATGGCTATCAATAAAGAAGACTTGACAGAGGCTCTGGAGGGAATATAATACCTTCAGGGCCTAAATCTA
ATTGACAAAACGGAGGAATT

Downstream 100 bases:

>100_bases
AAGTTACTATTTAAAAAACCGTTAACGGAAAAAATGAACCGTTAACGGTTTTTTAATAATAAAATAGAATGCATCATAAT
ATTATAAGGCATACGTTTAC

Product: aluminium resistance family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MHLDILDKLANEVEMEVQSVYREIEARAMTNHQRVLKGFHLAKTSDYHLRGTTGYGYNDTGREALEKIYAHIFGAEAALV
RGQIVSGTHAIAIALFGMLRPGDELLAVQGSPYDTLEEIIGKRGNAPGSLKDLGISYNQVELTPEGTLDWEGIEAALNPR
TRVMLVQRSRGYAWRPSLTMAELQKLINYIKKRAPQVYVFVDNCYGELVETLEPTAIGADLIAGSLMKNPGGGLAPTGGY
VAGRKDLVERAANRWTAPGIGAEVGPSLGHQGLLFQGIFLAPHIVAEALKGAVFAARLFERLGFKVSPAYDEQRSDIIQA
IALESPERLVAFCRGIQGASPVDAHALPEPDYMPGYEDDVIMAAGTFVQGASLELTADAPLRQPYAVYLQGGLSKEYVRI
GVINAAKNVLKIK

Sequences:

>Translated_413_residues
MHLDILDKLANEVEMEVQSVYREIEARAMTNHQRVLKGFHLAKTSDYHLRGTTGYGYNDTGREALEKIYAHIFGAEAALV
RGQIVSGTHAIAIALFGMLRPGDELLAVQGSPYDTLEEIIGKRGNAPGSLKDLGISYNQVELTPEGTLDWEGIEAALNPR
TRVMLVQRSRGYAWRPSLTMAELQKLINYIKKRAPQVYVFVDNCYGELVETLEPTAIGADLIAGSLMKNPGGGLAPTGGY
VAGRKDLVERAANRWTAPGIGAEVGPSLGHQGLLFQGIFLAPHIVAEALKGAVFAARLFERLGFKVSPAYDEQRSDIIQA
IALESPERLVAFCRGIQGASPVDAHALPEPDYMPGYEDDVIMAAGTFVQGASLELTADAPLRQPYAVYLQGGLSKEYVRI
GVINAAKNVLKIK
>Mature_413_residues
MHLDILDKLANEVEMEVQSVYREIEARAMTNHQRVLKGFHLAKTSDYHLRGTTGYGYNDTGREALEKIYAHIFGAEAALV
RGQIVSGTHAIAIALFGMLRPGDELLAVQGSPYDTLEEIIGKRGNAPGSLKDLGISYNQVELTPEGTLDWEGIEAALNPR
TRVMLVQRSRGYAWRPSLTMAELQKLINYIKKRAPQVYVFVDNCYGELVETLEPTAIGADLIAGSLMKNPGGGLAPTGGY
VAGRKDLVERAANRWTAPGIGAEVGPSLGHQGLLFQGIFLAPHIVAEALKGAVFAARLFERLGFKVSPAYDEQRSDIIQA
IALESPERLVAFCRGIQGASPVDAHALPEPDYMPGYEDDVIMAAGTFVQGASLELTADAPLRQPYAVYLQGGLSKEYVRI
GVINAAKNVLKIK

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 44831; Mature: 44831

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLDILDKLANEVEMEVQSVYREIEARAMTNHQRVLKGFHLAKTSDYHLRGTTGYGYNDT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCH
GREALEKIYAHIFGAEAALVRGQIVSGTHAIAIALFGMLRPGDELLAVQGSPYDTLEEII
HHHHHHHHHHHHHCCHHHHHHCEECCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHH
GKRGNAPGSLKDLGISYNQVELTPEGTLDWEGIEAALNPRTRVMLVQRSRGYAWRPSLTM
CCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCHHHHCCCCEEEEEEEECCCCEECCCCCH
AELQKLINYIKKRAPQVYVFVDNCYGELVETLEPTAIGADLIAGSLMKNPGGGLAPTGGY
HHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCC
VAGRKDLVERAANRWTAPGIGAEVGPSLGHQGLLFQGIFLAPHIVAEALKGAVFAARLFE
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLGFKVSPAYDEQRSDIIQAIALESPERLVAFCRGIQGASPVDAHALPEPDYMPGYEDDV
HCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCE
IMAAGTFVQGASLELTADAPLRQPYAVYLQGGLSKEYVRIGVINAAKNVLKIK
EEEECCEECCCCEEEECCCCCCCCEEEEEECCCCCCEEEEEEEHHHCCCEECC
>Mature Secondary Structure
MHLDILDKLANEVEMEVQSVYREIEARAMTNHQRVLKGFHLAKTSDYHLRGTTGYGYNDT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCH
GREALEKIYAHIFGAEAALVRGQIVSGTHAIAIALFGMLRPGDELLAVQGSPYDTLEEII
HHHHHHHHHHHHHCCHHHHHHCEECCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHH
GKRGNAPGSLKDLGISYNQVELTPEGTLDWEGIEAALNPRTRVMLVQRSRGYAWRPSLTM
CCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCHHHHCCCCEEEEEEEECCCCEECCCCCH
AELQKLINYIKKRAPQVYVFVDNCYGELVETLEPTAIGADLIAGSLMKNPGGGLAPTGGY
HHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCC
VAGRKDLVERAANRWTAPGIGAEVGPSLGHQGLLFQGIFLAPHIVAEALKGAVFAARLFE
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLGFKVSPAYDEQRSDIIQAIALESPERLVAFCRGIQGASPVDAHALPEPDYMPGYEDDV
HCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCE
IMAAGTFVQGASLELTADAPLRQPYAVYLQGGLSKEYVRIGVINAAKNVLKIK
EEEECCEECCCCEEEECCCCCCCCEEEEEECCCCCCEEEEEEEHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]