Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

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The map label for this gene is yghO [H]

Identifier: 134299703

GI number: 134299703

Start: 2030133

End: 2031212

Strand: Reverse

Name: yghO [H]

Synonym: Dred_1850

Alternate gene names: 134299703

Gene position: 2031212-2030133 (Counterclockwise)

Preceding gene: 134299704

Following gene: 134299700

Centisome position: 56.3

GC content: 41.67

Gene sequence:

>1080_bases
TTGTTAAAAATTATCAAAGTTAAGGAACCTGGCCATTGGCAAAAATTCTTGGAATTACCCTGGCTAATATATCGCAAGGA
TCCACTTTGGACCCCCTGGGCGGACCATGGCAGAATGTTTGACCCTCAGTCTAATCCTATCTTGCGTCACGTTCGGTATG
AGTGTTTTTTGGCCTTAGATAATGATAAGCCTGTTGGCCGTATCGCGGCAATTACAGATGATCTTTTGGCAGATAAAAGG
GTGGGCTTGTTTGGTTGTTTCGAGTCTATTGATAGTTCCGAGGTAGCAGGGGAGTTAATAAAAGCAGCTAGCCAAAGTCT
ATCTGATAGGGGAAAAAATATAATTCAGGGTCCGGCAACGTTAAATACTTCACAGCAGGTCGGGTTTTTGGTAGAGGGGT
TTGAAAAACCTCCCTTATTTATGATGCCGTATAATCCACCATATTATATAAGACTCATGGAGGAAAATGGATTTTATTCA
ATATTAGGACTTTACTCTTACTCTTATTCCTATTCTACAAAAATAGATGCTAAACTGGCCTCTGTAGCCAAAAGGGCAGC
CAGGATTCCCAATATAAGGATACGTCCTGTTAATTTAAATAATCCCTGGAGAGAAGGGGAAAAATTAGCAGCTATTCATA
ACGAAACCATGACCAATCAGTGGGGATTTGTTCCCATGGACCAGGAAGAAGCAGCAAGCTTTATAGCCGGTCTCAGGGGT
AATACTGACCCTGAGCTATTAATCTTTTGTGAGGTTGACAACAAGCCTGTAGGAGTATGCTTAATGATGCCTGATGCAGG
GCCTAGGATACGTGCAGCCAGACGTTCAGGTTTCAATCTTCCTTTTACAAGGAGTAAACTCTTACGTGTTGGGGTTTTGG
GAGTTAGTCCGGAATACAGGCGCCGTGGAGTAGTGGCTTTATTAATAGACAGAGCAAGAAGAACCATGCTGAGAAAGGGC
TATCAACAGGCTGAGTTATCTCTGATTATGGATACAAATAAAGATATGAACAGAATTATTACTTCAGCCGTGGGAGGCCA
AGTAAGTAAAAGATATCGGGTTTATCAAAAGGATTTATAA

Upstream 100 bases:

>100_bases
ATAATTTAGGGACGGTTATTGGAATTCCTCAAGGGGTTATCTGCACAATACTGCAGGGTGATACATAAAATGAAGCAACT
AGAATTTTGGAGGTATCATT

Downstream 100 bases:

>100_bases
TTTTCGAGGGATTTCAGTCCAAACGGTGCTTTTATTACCGATTCTGCTTTGAGGGGCACTTTAATCAAATGAATAGGTTT
CTTAAAGCCTGATAACCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MLKIIKVKEPGHWQKFLELPWLIYRKDPLWTPWADHGRMFDPQSNPILRHVRYECFLALDNDKPVGRIAAITDDLLADKR
VGLFGCFESIDSSEVAGELIKAASQSLSDRGKNIIQGPATLNTSQQVGFLVEGFEKPPLFMMPYNPPYYIRLMEENGFYS
ILGLYSYSYSYSTKIDAKLASVAKRAARIPNIRIRPVNLNNPWREGEKLAAIHNETMTNQWGFVPMDQEEAASFIAGLRG
NTDPELLIFCEVDNKPVGVCLMMPDAGPRIRAARRSGFNLPFTRSKLLRVGVLGVSPEYRRRGVVALLIDRARRTMLRKG
YQQAELSLIMDTNKDMNRIITSAVGGQVSKRYRVYQKDL

Sequences:

>Translated_359_residues
MLKIIKVKEPGHWQKFLELPWLIYRKDPLWTPWADHGRMFDPQSNPILRHVRYECFLALDNDKPVGRIAAITDDLLADKR
VGLFGCFESIDSSEVAGELIKAASQSLSDRGKNIIQGPATLNTSQQVGFLVEGFEKPPLFMMPYNPPYYIRLMEENGFYS
ILGLYSYSYSYSTKIDAKLASVAKRAARIPNIRIRPVNLNNPWREGEKLAAIHNETMTNQWGFVPMDQEEAASFIAGLRG
NTDPELLIFCEVDNKPVGVCLMMPDAGPRIRAARRSGFNLPFTRSKLLRVGVLGVSPEYRRRGVVALLIDRARRTMLRKG
YQQAELSLIMDTNKDMNRIITSAVGGQVSKRYRVYQKDL
>Mature_359_residues
MLKIIKVKEPGHWQKFLELPWLIYRKDPLWTPWADHGRMFDPQSNPILRHVRYECFLALDNDKPVGRIAAITDDLLADKR
VGLFGCFESIDSSEVAGELIKAASQSLSDRGKNIIQGPATLNTSQQVGFLVEGFEKPPLFMMPYNPPYYIRLMEENGFYS
ILGLYSYSYSYSTKIDAKLASVAKRAARIPNIRIRPVNLNNPWREGEKLAAIHNETMTNQWGFVPMDQEEAASFIAGLRG
NTDPELLIFCEVDNKPVGVCLMMPDAGPRIRAARRSGFNLPFTRSKLLRVGVLGVSPEYRRRGVVALLIDRARRTMLRKG
YQQAELSLIMDTNKDMNRIITSAVGGQVSKRYRVYQKDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40804; Mature: 40804

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIIKVKEPGHWQKFLELPWLIYRKDPLWTPWADHGRMFDPQSNPILRHVRYECFLALD
CEEEEEECCCCCHHHHHHCCEEEEECCCCCCCCCCCCEEECCCCCHHHHEEEEEEEEEEC
NDKPVGRIAAITDDLLADKRVGLFGCFESIDSSEVAGELIKAASQSLSDRGKNIIQGPAT
CCCCCCEEEHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCC
LNTSQQVGFLVEGFEKPPLFMMPYNPPYYIRLMEENGFYSILGLYSYSYSYSTKIDAKLA
CCCCHHCCHHEECCCCCCEEEEECCCCEEEEEEECCCCEEEEEEEEECCEECCCHHHHHH
SVAKRAARIPNIRIRPVNLNNPWREGEKLAAIHNETMTNQWGFVPMDQEEAASFIAGLRG
HHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCC
NTDPELLIFCEVDNKPVGVCLMMPDAGPRIRAARRSGFNLPFTRSKLLRVGVLGVSPEYR
CCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHCCCCCCCCHHHHEEEEEECCCHHHH
RRGVVALLIDRARRTMLRKGYQQAELSLIMDTNKDMNRIITSAVGGQVSKRYRVYQKDL
HCCEEEEHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MLKIIKVKEPGHWQKFLELPWLIYRKDPLWTPWADHGRMFDPQSNPILRHVRYECFLALD
CEEEEEECCCCCHHHHHHCCEEEEECCCCCCCCCCCCEEECCCCCHHHHEEEEEEEEEEC
NDKPVGRIAAITDDLLADKRVGLFGCFESIDSSEVAGELIKAASQSLSDRGKNIIQGPAT
CCCCCCEEEHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCC
LNTSQQVGFLVEGFEKPPLFMMPYNPPYYIRLMEENGFYSILGLYSYSYSYSTKIDAKLA
CCCCHHCCHHEECCCCCCEEEEECCCCEEEEEEECCCCEEEEEEEEECCEECCCHHHHHH
SVAKRAARIPNIRIRPVNLNNPWREGEKLAAIHNETMTNQWGFVPMDQEEAASFIAGLRG
HHHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCC
NTDPELLIFCEVDNKPVGVCLMMPDAGPRIRAARRSGFNLPFTRSKLLRVGVLGVSPEYR
CCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHCCCCCCCCHHHHEEEEEECCCHHHH
RRGVVALLIDRARRTMLRKGYQQAELSLIMDTNKDMNRIITSAVGGQVSKRYRVYQKDL
HCCEEEEHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]