| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is yeaL [C]
Identifier: 134299532
GI number: 134299532
Start: 1830424
End: 1830879
Strand: Reverse
Name: yeaL [C]
Synonym: Dred_1676
Alternate gene names: 134299532
Gene position: 1830879-1830424 (Counterclockwise)
Preceding gene: 134299533
Following gene: 134299513
Centisome position: 50.74
GC content: 39.25
Gene sequence:
>456_bases ATGTATTCCGGAGAAATGACCATGGTAATTTTGCTACTAATTGGCTTAGTGGCCCAATCAAATCTCATTGCCATTTGCGC CAGTGTTTTATTAATTGTTCAATTTAGTAAAATGGATTTTCTTTTTCCTTATTTGGAAACCCATGGCTTGGAATTGGGCT TACTGTTTTTACTGCTTTCAATCTTAGTGCCCATTGCAACTGACAGGGTAACCACAAGGGATCTCCTTTATAATGTATCT TCTCTTCCCGGTTTTTTATCCATCGTTGGTGGTATATTGGCAACCCATCTAAACAGCGAAGGCTTAAAGTTGATGCAGAT TGATCCTAGCATTATTTTTGGGTTAATTGTAGGGTCCGTAATCGGCATTATTTTTTTTAACGGTCAACCGGTGGGACCCT TAATGGCTGCCGGAGTAGCGGCACTCTTTATCGAAGTATTAAATTGGTTCCATTAA
Upstream 100 bases:
>100_bases GGAATGGGGCTAGGCTGGCTGCGGTTTATTTAATCGTGCTAGTCTTTACTATGGTCGCATATATTGTAATAAAACCTGTC CATTAAAAGGAGCTATCGTA
Downstream 100 bases:
>100_bases CACTAATACATTTTTATCTGTACCATTTGAACAACCTGGGCAATAAAACCACCTATCACAGGTAAATTCAACACTACTAG CTTTTGCAAAAAAAACAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MYSGEMTMVILLLIGLVAQSNLIAICASVLLIVQFSKMDFLFPYLETHGLELGLLFLLLSILVPIATDRVTTRDLLYNVS SLPGFLSIVGGILATHLNSEGLKLMQIDPSIIFGLIVGSVIGIIFFNGQPVGPLMAAGVAALFIEVLNWFH
Sequences:
>Translated_151_residues MYSGEMTMVILLLIGLVAQSNLIAICASVLLIVQFSKMDFLFPYLETHGLELGLLFLLLSILVPIATDRVTTRDLLYNVS SLPGFLSIVGGILATHLNSEGLKLMQIDPSIIFGLIVGSVIGIIFFNGQPVGPLMAAGVAALFIEVLNWFH >Mature_151_residues MYSGEMTMVILLLIGLVAQSNLIAICASVLLIVQFSKMDFLFPYLETHGLELGLLFLLLSILVPIATDRVTTRDLLYNVS SLPGFLSIVGGILATHLNSEGLKLMQIDPSIIFGLIVGSVIGIIFFNGQPVGPLMAAGVAALFIEVLNWFH
Specific function: Unknown
COG id: COG2707
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0756 family
Homologues:
Organism=Escherichia coli, GI1788090, Length=128, Percent_Identity=31.25, Blast_Score=85, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1676_DESRM (A4J550)
Other databases:
- EMBL: CP000612 - RefSeq: YP_001113028.1 - STRING: A4J550 - GeneID: 4957729 - GenomeReviews: CP000612_GR - KEGG: drm:Dred_1676 - eggNOG: COG2707 - HOGENOM: HBG615456 - ProtClustDB: CLSK870236 - BioCyc: DRED349161:DRED_1676-MONOMER - HAMAP: MF_01874 - InterPro: IPR007382 - ProDom: PD021096
Pfam domain/function: PF04284 DUF441
EC number: NA
Molecular weight: Translated: 16305; Mature: 16305
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe517d14)-; HASH(0xeda3618)-; HASH(0x9031f78)-; HASH(0xba7eeb4)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSGEMTMVILLLIGLVAQSNLIAICASVLLIVQFSKMDFLFPYLETHGLELGLLFLLLS CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ILVPIATDRVTTRDLLYNVSSLPGFLSIVGGILATHLNSEGLKLMQIDPSIIFGLIVGSV HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHH IGIIFFNGQPVGPLMAAGVAALFIEVLNWFH HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure MYSGEMTMVILLLIGLVAQSNLIAICASVLLIVQFSKMDFLFPYLETHGLELGLLFLLLS CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ILVPIATDRVTTRDLLYNVSSLPGFLSIVGGILATHLNSEGLKLMQIDPSIIFGLIVGSV HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHH IGIIFFNGQPVGPLMAAGVAALFIEVLNWFH HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA