| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is nuoG [C]
Identifier: 134299511
GI number: 134299511
Start: 1810542
End: 1812521
Strand: Reverse
Name: nuoG [C]
Synonym: Dred_1654
Alternate gene names: 134299511
Gene position: 1812521-1810542 (Counterclockwise)
Preceding gene: 134299512
Following gene: 134299510
Centisome position: 50.23
GC content: 43.03
Gene sequence:
>1980_bases ATGAGTGGAAAAATTACCATTAATGGTCAAATTATAGATTTTACCGATGAAAAGAATATTCTGGCTGTTGCACGAAAAGT AGGTATTGATATCCCTACCCTCTGCTATCATCCTGAACTAACCATTGCGGGTGCTTGTCGTTTGTGTGTGGTAGAAATTG AGAGAATGGGCGTTCAGGCTTCCTGTTCTACCGCTCCCACAGATGGTATGGTGGTTTATACCAATTCAGAAAAAGTTAAC AGAGTACGCAAAATGGTACTGGAACTCCTTTTGGCAAATCACGACCGTGAGTGTACAACCTGTGACTCCAGCGGGGCTTG CAAACTTCAAAAGTATGCCAATGACTATGGTATTAAACGTTTGCGCTATCCAAATCGTACAACAATGGCTCCATTGGATA CTTCAAGCCTGTCTATTGTTCGGGATCCCAACAAGTGTATCCTATGCGGTTTATGTGTACGGGTATGTAAAGAAAAACAA GGCATTGGTGTATGGGATTTCAAAAACCGTGGTTCTCGTACTGATATTGTTGCCGCTATGGATCAGCCTTTGTCTGAATC TGCTTGTATTAACTGCGGTCAGTGCATCGCGGTTTGTCCTACAGGAGCCCTTACATCCAACTCCTCTTCTATACAAGAAA TTTGGGCGGCCATTCGTGATCCTAAAAAGACCGTTGTTTGCCAGATAGCCCCGGCTCCCAGAGCAGCCCTCGGAGAAGAA TTTGGCCTGGGTTCCGTTGATGTAACTAAAAAAGTCGTAACAGCTCTGCGTAAAATAGGTTTTGACAAAGTCTTCGACAC AGTATTCACAGCCGATATGACAACCATCGAAGAGTCCAATGAATTTTTAAGCAGGCTTGTAAAGGGAGAGAATCTTCCCC TCTTTACCTCCTGTTGCCCCGGTTGGGTAAAATATGCGGAGGAATTCCATCCTGAACTGCTTAGCAATTTATCGAGTTGC CGGTCACCACAACAAATGTTTGGTGCTGTATTAAAGAAAAAGTACGCCAAGGAACTGGGGATTGCCCCACAAGATATGTT TGTGGTATCGGTGATGCCCTGTACCGCTAAAAAATATGAAGCAAAACGTCCGGAGTTTACCACCGAAGGCGCCTATGATG TAGACGCAGTATTAACAACTGTTGAAGCTGCCCGGATGATTAAAGAAGCTGGCATTATTTTCAATACACTAGAAGAATCG GAATTTGACCAACCGATGCAACAAGCTACCGGTTCTGGAGTATTGTTTGGTACCACTGGTGGGGTAATGGAATCTGTCAT TCGTTACGTTGCCGGGAAACTTCTCAATGCAGAAGGCCGAGTTGACGTAGAATTCACCCGTGGTATGGAAGATACTAAAA TTGCCAGCATAAATGTAGGTGACAATAAGCTAAATCTGGCTGTGGTAAATGGACTGTCTGCCACAGAAGCTTTAATTCAA AAGATCCAGTCTGGTGAATTAGATGTTCAGGCAGTAGAAGTTATGGCTTGTCCCGGTGGCTGTGTAGGAGGCGGCGGCCA GCCCTTCCAAAATGATAACGAACACCGCAAAGCCAGGGCCAGTGAAATTTATGGTATTGATGCAAAACTAGAGCTTCATA AAGCACAGGATAATGAAGATCTAAATAAAATTTTTGAAAAATATTGGGGTGGTTGCTGCAACCATGATACCCACCATGAT TTGCACACCCACTATAATCCCAAAAGACGTGTTGCCGGTAATGAAATTGTAATCAAAGATGGTAATGGTCCAGAAATAAC CGTATGTATTGGCGAAGGTTGCATGAAAAAAGGTTCCATTAGTTTAATAGAAAAGCTAGTTAACTTACCAGTTAAAGTCA AAGGTGTTTTCTGTCTAGAAAACTGTGGCAACGGTGTATCCGTTAAGGTTAATGATGAAATCCTACACGTCACTCCAGAA AATGCTTTAGAATCCATTCAAAAAAAGTGCGGTTGTAGTTGTGGTTGCTGCTCTAAATAG
Upstream 100 bases:
>100_bases AATGTAGATCTCTGCTTGAAGTGCGGTGCTTGTATGGAAAAATGTAAGTTTGGCTCTATAGAGATCAGGTAGCTGGTTAT CTGAGAAAGGGTGTGACGTA
Downstream 100 bases:
>100_bases AAATGTTATAAACAGGTGCTTGTTTGCACCTGTTTTTTAATTTAGTGCAAGTAATTCAGATAGTTAATTTGTCGTTTAAA ATCTTATAAAACTACTTGAC
Product: hydrogenase
Products: NA
Alternate protein names: CpI; Fe-only hydrogenase; [Fe] hydrogenase [H]
Number of amino acids: Translated: 659; Mature: 658
Protein sequence:
>659_residues MSGKITINGQIIDFTDEKNILAVARKVGIDIPTLCYHPELTIAGACRLCVVEIERMGVQASCSTAPTDGMVVYTNSEKVN RVRKMVLELLLANHDRECTTCDSSGACKLQKYANDYGIKRLRYPNRTTMAPLDTSSLSIVRDPNKCILCGLCVRVCKEKQ GIGVWDFKNRGSRTDIVAAMDQPLSESACINCGQCIAVCPTGALTSNSSSIQEIWAAIRDPKKTVVCQIAPAPRAALGEE FGLGSVDVTKKVVTALRKIGFDKVFDTVFTADMTTIEESNEFLSRLVKGENLPLFTSCCPGWVKYAEEFHPELLSNLSSC RSPQQMFGAVLKKKYAKELGIAPQDMFVVSVMPCTAKKYEAKRPEFTTEGAYDVDAVLTTVEAARMIKEAGIIFNTLEES EFDQPMQQATGSGVLFGTTGGVMESVIRYVAGKLLNAEGRVDVEFTRGMEDTKIASINVGDNKLNLAVVNGLSATEALIQ KIQSGELDVQAVEVMACPGGCVGGGGQPFQNDNEHRKARASEIYGIDAKLELHKAQDNEDLNKIFEKYWGGCCNHDTHHD LHTHYNPKRRVAGNEIVIKDGNGPEITVCIGEGCMKKGSISLIEKLVNLPVKVKGVFCLENCGNGVSVKVNDEILHVTPE NALESIQKKCGCSCGCCSK
Sequences:
>Translated_659_residues MSGKITINGQIIDFTDEKNILAVARKVGIDIPTLCYHPELTIAGACRLCVVEIERMGVQASCSTAPTDGMVVYTNSEKVN RVRKMVLELLLANHDRECTTCDSSGACKLQKYANDYGIKRLRYPNRTTMAPLDTSSLSIVRDPNKCILCGLCVRVCKEKQ GIGVWDFKNRGSRTDIVAAMDQPLSESACINCGQCIAVCPTGALTSNSSSIQEIWAAIRDPKKTVVCQIAPAPRAALGEE FGLGSVDVTKKVVTALRKIGFDKVFDTVFTADMTTIEESNEFLSRLVKGENLPLFTSCCPGWVKYAEEFHPELLSNLSSC RSPQQMFGAVLKKKYAKELGIAPQDMFVVSVMPCTAKKYEAKRPEFTTEGAYDVDAVLTTVEAARMIKEAGIIFNTLEES EFDQPMQQATGSGVLFGTTGGVMESVIRYVAGKLLNAEGRVDVEFTRGMEDTKIASINVGDNKLNLAVVNGLSATEALIQ KIQSGELDVQAVEVMACPGGCVGGGGQPFQNDNEHRKARASEIYGIDAKLELHKAQDNEDLNKIFEKYWGGCCNHDTHHD LHTHYNPKRRVAGNEIVIKDGNGPEITVCIGEGCMKKGSISLIEKLVNLPVKVKGVFCLENCGNGVSVKVNDEILHVTPE NALESIQKKCGCSCGCCSK >Mature_658_residues SGKITINGQIIDFTDEKNILAVARKVGIDIPTLCYHPELTIAGACRLCVVEIERMGVQASCSTAPTDGMVVYTNSEKVNR VRKMVLELLLANHDRECTTCDSSGACKLQKYANDYGIKRLRYPNRTTMAPLDTSSLSIVRDPNKCILCGLCVRVCKEKQG IGVWDFKNRGSRTDIVAAMDQPLSESACINCGQCIAVCPTGALTSNSSSIQEIWAAIRDPKKTVVCQIAPAPRAALGEEF GLGSVDVTKKVVTALRKIGFDKVFDTVFTADMTTIEESNEFLSRLVKGENLPLFTSCCPGWVKYAEEFHPELLSNLSSCR SPQQMFGAVLKKKYAKELGIAPQDMFVVSVMPCTAKKYEAKRPEFTTEGAYDVDAVLTTVEAARMIKEAGIIFNTLEESE FDQPMQQATGSGVLFGTTGGVMESVIRYVAGKLLNAEGRVDVEFTRGMEDTKIASINVGDNKLNLAVVNGLSATEALIQK IQSGELDVQAVEVMACPGGCVGGGGQPFQNDNEHRKARASEIYGIDAKLELHKAQDNEDLNKIFEKYWGGCCNHDTHHDL HTHYNPKRRVAGNEIVIKDGNGPEITVCIGEGCMKKGSISLIEKLVNLPVKVKGVFCLENCGNGVSVKVNDEILHVTPEN ALESIQKKCGCSCGCCSK
Specific function: Ndh-1 Shuttles Electrons From NADH, Via Fmn And Iron- Sulfur (Fe-S) Centers, To Quinones In The Respiratory Chain. The Immediate Electron Acceptor For The Enzyme In This Species Is Believed To Be Ubiquinone. Couples The Redox Reaction To Proton Translocat
COG id: COG4624
COG function: function code R; Iron only hydrogenase large subunit, C-terminal domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI11968051, Length=397, Percent_Identity=30.4785894206549, Blast_Score=191, Evalue=3e-48, Organism=Homo sapiens, GI134284357, Length=367, Percent_Identity=26.158038147139, Blast_Score=152, Evalue=1e-36, Organism=Homo sapiens, GI6912524, Length=367, Percent_Identity=26.158038147139, Blast_Score=152, Evalue=1e-36, Organism=Homo sapiens, GI84452151, Length=367, Percent_Identity=26.158038147139, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI14165461, Length=404, Percent_Identity=25.990099009901, Blast_Score=139, Evalue=9e-33, Organism=Homo sapiens, GI33519475, Length=210, Percent_Identity=32.3809523809524, Blast_Score=114, Evalue=3e-25, Organism=Escherichia coli, GI145693161, Length=251, Percent_Identity=27.0916334661355, Blast_Score=98, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71995015, Length=400, Percent_Identity=29, Blast_Score=148, Evalue=9e-36, Organism=Caenorhabditis elegans, GI32566231, Length=202, Percent_Identity=34.1584158415842, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI193209088, Length=197, Percent_Identity=35.0253807106599, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17565758, Length=197, Percent_Identity=35.0253807106599, Blast_Score=113, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6324089, Length=385, Percent_Identity=24.1558441558442, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI116007464, Length=410, Percent_Identity=27.8048780487805, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI116007470, Length=410, Percent_Identity=27.8048780487805, Blast_Score=172, Evalue=7e-43, Organism=Drosophila melanogaster, GI116007466, Length=410, Percent_Identity=27.8048780487805, Blast_Score=172, Evalue=7e-43, Organism=Drosophila melanogaster, GI116007468, Length=410, Percent_Identity=27.8048780487805, Blast_Score=172, Evalue=8e-43, Organism=Drosophila melanogaster, GI116007462, Length=287, Percent_Identity=29.2682926829268, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI24640559, Length=199, Percent_Identity=33.1658291457286, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI24640557, Length=199, Percent_Identity=33.1658291457286, Blast_Score=105, Evalue=1e-22,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012675 - InterPro: IPR009016 - InterPro: IPR004108 - InterPro: IPR003149 - InterPro: IPR013352 - InterPro: IPR001041 [H]
Pfam domain/function: PF02906 Fe_hyd_lg_C; PF02256 Fe_hyd_SSU [H]
EC number: =1.12.7.2 [H]
Molecular weight: Translated: 71649; Mature: 71518
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00641 COMPLEX1_75K_1 ; PS51085 2FE2S_FER_2 ; PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKITINGQIIDFTDEKNILAVARKVGIDIPTLCYHPELTIAGACRLCVVEIERMGVQA CCCEEEECCEEEEECCCCCHHHHHHHHCCCCCCEEECCCEEEHHHHHHHHHHHHHCCCEE SCSTAPTDGMVVYTNSEKVNRVRKMVLELLLANHDRECTTCDSSGACKLQKYANDYGIKR ECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHCCEE LRYPNRTTMAPLDTSSLSIVRDPNKCILCGLCVRVCKEKQGIGVWDFKNRGSRTDIVAAM EECCCCCCCCCCCCCCEEEEECCCCEEHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEC DQPLSESACINCGQCIAVCPTGALTSNSSSIQEIWAAIRDPKKTVVCQIAPAPRAALGEE CCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHCCHH FGLGSVDVTKKVVTALRKIGFDKVFDTVFTADMTTIEESNEFLSRLVKGENLPLFTSCCP CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHCCC GWVKYAEEFHPELLSNLSSCRSPQQMFGAVLKKKYAKELGIAPQDMFVVSVMPCTAKKYE HHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHC AKRPEFTTEGAYDVDAVLTTVEAARMIKEAGIIFNTLEESEFDQPMQQATGSGVLFGTTG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHEEHHHHHHCCCHHHHCCCCEEEEECCH GVMESVIRYVAGKLLNAEGRVDVEFTRGMEDTKIASINVGDNKLNLAVVNGLSATEALIQ HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHHH KIQSGELDVQAVEVMACPGGCVGGGGQPFQNDNEHRKARASEIYGIDAKLELHKAQDNED HHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHEECCCCEEEEECCCCCHH LNKIFEKYWGGCCNHDTHHDLHTHYNPKRRVAGNEIVIKDGNGPEITVCIGEGCMKKGSI HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCH SLIEKLVNLPVKVKGVFCLENCGNGVSVKVNDEILHVTPENALESIQKKCGCSCGCCSK HHHHHHHCCCEEEEEEEEEECCCCCCEEEECCCEEEECCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SGKITINGQIIDFTDEKNILAVARKVGIDIPTLCYHPELTIAGACRLCVVEIERMGVQA CCEEEECCEEEEECCCCCHHHHHHHHCCCCCCEEECCCEEEHHHHHHHHHHHHHCCCEE SCSTAPTDGMVVYTNSEKVNRVRKMVLELLLANHDRECTTCDSSGACKLQKYANDYGIKR ECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHCCEE LRYPNRTTMAPLDTSSLSIVRDPNKCILCGLCVRVCKEKQGIGVWDFKNRGSRTDIVAAM EECCCCCCCCCCCCCCEEEEECCCCEEHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEC DQPLSESACINCGQCIAVCPTGALTSNSSSIQEIWAAIRDPKKTVVCQIAPAPRAALGEE CCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHCCHH FGLGSVDVTKKVVTALRKIGFDKVFDTVFTADMTTIEESNEFLSRLVKGENLPLFTSCCP CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHCCC GWVKYAEEFHPELLSNLSSCRSPQQMFGAVLKKKYAKELGIAPQDMFVVSVMPCTAKKYE HHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHC AKRPEFTTEGAYDVDAVLTTVEAARMIKEAGIIFNTLEESEFDQPMQQATGSGVLFGTTG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHEEHHHHHHCCCHHHHCCCCEEEEECCH GVMESVIRYVAGKLLNAEGRVDVEFTRGMEDTKIASINVGDNKLNLAVVNGLSATEALIQ HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHHH KIQSGELDVQAVEVMACPGGCVGGGGQPFQNDNEHRKARASEIYGIDAKLELHKAQDNED HHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHEECCCCEEEEECCCCCHH LNKIFEKYWGGCCNHDTHHDLHTHYNPKRRVAGNEIVIKDGNGPEITVCIGEGCMKKGSI HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCH SLIEKLVNLPVKVKGVFCLENCGNGVSVKVNDEILHVTPENALESIQKKCGCSCGCCSK HHHHHHHCCCEEEEEEEEEECCCCCCEEEECCCEEEECCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1911757; 9836629; 10529166 [H]