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The map label for this gene is ydjZ [H]

Identifier: 134299459

GI number: 134299459

Start: 1743015

End: 1743710

Strand: Reverse

Name: ydjZ [H]

Synonym: Dred_1602

Alternate gene names: 134299459

Gene position: 1743710-1743015 (Counterclockwise)

Preceding gene: 134299460

Following gene: 134299456

Centisome position: 48.33

GC content: 43.68

Gene sequence:

>696_bases
ATGATAAAAAAAGTGACTTTTATGATTGTTGCCGCTTCGTTGATCGTGGTATTATTCTATGTTCTTGATATCCATACCCT
CCCAATTTGGCAGTCACACCATTTTAATAATCCAGAGAATCTGGCAGAATACATCCGCTCCTTTGGCGCTATGACTGTTG
TGATAAGTCTGTCTTTAATGGTACTGCAAACTCTCTTCACACCCCTCCCCCTCTTTTTACTGGCAGGGGCCAATGGTTTT
ATATTTGGCGTCTGGTACGGCATTTTGATTACACTGGTTGGCTCTATCCTCGGAGCTACAATTGCTTTTTATGTTGCCCG
GGGTTTTGGAAGAGGTATGTTATCACGTTATCTGAAAGAAAACTATCTGGCAAAGGTTGACGAAATGAGTTGCCGGGAAG
GCCCGTGGATGGTGTTTATGGCCCGATTAATACCTGTGATTCCTTCCAGCATCATCAGCTACTTAGCCGGTTTAAGCAAA
ATGACCTTCCGGGGCTTTTTTGTTGCCACGGCCATTGGCAAAGTACCCGAAATTGTGATCTACACTGCCCTGGGTCATAG
CTTTAGTCAAGCCGAAGGACTAGCCACTAAAGTAACGATTCTCCTCATCCTCGTTACTATTGTTGCTTGGCCATTGATAT
CGCGAAAGATTAAAAATAACAAGAAACCCCCACATAAAATACCCCCCGATCAATAA

Upstream 100 bases:

>100_bases
TTTTAATAATATATTACGACTTACAACTTCTTACCTTTTCAAAGTTAGCGGGTTTTGGTATATTTAATCTGCCACAACCT
TATAAGCTAGGGGATATTAT

Downstream 100 bases:

>100_bases
TCAGGGGTTTTATTTACTACTTCCTTTTAAGTTTTGCAGAAAAATAATAGATAACCAAGACACCCAAGACCCCCGCCACC
AAGAAATCCGCCCGGTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MIKKVTFMIVAASLIVVLFYVLDIHTLPIWQSHHFNNPENLAEYIRSFGAMTVVISLSLMVLQTLFTPLPLFLLAGANGF
IFGVWYGILITLVGSILGATIAFYVARGFGRGMLSRYLKENYLAKVDEMSCREGPWMVFMARLIPVIPSSIISYLAGLSK
MTFRGFFVATAIGKVPEIVIYTALGHSFSQAEGLATKVTILLILVTIVAWPLISRKIKNNKKPPHKIPPDQ

Sequences:

>Translated_231_residues
MIKKVTFMIVAASLIVVLFYVLDIHTLPIWQSHHFNNPENLAEYIRSFGAMTVVISLSLMVLQTLFTPLPLFLLAGANGF
IFGVWYGILITLVGSILGATIAFYVARGFGRGMLSRYLKENYLAKVDEMSCREGPWMVFMARLIPVIPSSIISYLAGLSK
MTFRGFFVATAIGKVPEIVIYTALGHSFSQAEGLATKVTILLILVTIVAWPLISRKIKNNKKPPHKIPPDQ
>Mature_231_residues
MIKKVTFMIVAASLIVVLFYVLDIHTLPIWQSHHFNNPENLAEYIRSFGAMTVVISLSLMVLQTLFTPLPLFLLAGANGF
IFGVWYGILITLVGSILGATIAFYVARGFGRGMLSRYLKENYLAKVDEMSCREGPWMVFMARLIPVIPSSIISYLAGLSK
MTFRGFFVATAIGKVPEIVIYTALGHSFSQAEGLATKVTILLILVTIVAWPLISRKIKNNKKPPHKIPPDQ

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI1788049, Length=189, Percent_Identity=32.2751322751323, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI87081964, Length=198, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25649; Mature: 25649

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKVTFMIVAASLIVVLFYVLDIHTLPIWQSHHFNNPENLAEYIRSFGAMTVVISLSLM
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VLQTLFTPLPLFLLAGANGFIFGVWYGILITLVGSILGATIAFYVARGFGRGMLSRYLKE
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
NYLAKVDEMSCREGPWMVFMARLIPVIPSSIISYLAGLSKMTFRGFFVATAIGKVPEIVI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
YTALGHSFSQAEGLATKVTILLILVTIVAWPLISRKIKNNKKPPHKIPPDQ
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIKKVTFMIVAASLIVVLFYVLDIHTLPIWQSHHFNNPENLAEYIRSFGAMTVVISLSLM
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VLQTLFTPLPLFLLAGANGFIFGVWYGILITLVGSILGATIAFYVARGFGRGMLSRYLKE
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
NYLAKVDEMSCREGPWMVFMARLIPVIPSSIISYLAGLSKMTFRGFFVATAIGKVPEIVI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
YTALGHSFSQAEGLATKVTILLILVTIVAWPLISRKIKNNKKPPHKIPPDQ
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]