| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
Click here to switch to the map view.
The map label for this gene is 134299355
Identifier: 134299355
GI number: 134299355
Start: 1621852
End: 1622457
Strand: Reverse
Name: 134299355
Synonym: Dred_1496
Alternate gene names: NA
Gene position: 1622457-1621852 (Counterclockwise)
Preceding gene: 134299364
Following gene: 134299353
Centisome position: 44.97
GC content: 41.25
Gene sequence:
>606_bases ATGGCCGATAACCCAAAGGATAAAACAACCAACCAAGAAACTGAACCAGTGCAAACCAATGCCGTGAACAATTTTTGCCC TTCCTGCGGACCTGGTACTAACCCGTTACAGACACCCTATCCAGGATACCCCTGTGTGAACTATAAATATCATCCTACTT ATATGTATGTAGCTCAGTATGCCTATCCAGAGTCCCTAAGATTAATCGTAGAATCTGTAAGTGGTGAAAGAGAAGATGAA TTGTTTTACAACTATATGGTAAGCATTGCCCCGGCTGGACAAAAAGACATTGTAGCTTCCATTCGAGATGACGAAATCAA GCACAACAAAATGCTGCGGGAGTTGTATTGGGAATTAACCGGACAGGAGATACCACCTGCCCAGAACAATACCTTCCAAC CTCCCCAAAGTTACTGCGAAGGAATAACCAGTGCCCTATTTGGGGAACTGGCTGCAGTGGAAAGATATCGAAAAATTTTA TATGGTCTTGAGTTCCTACCTTATAGAAATATGATTACCGAAATTTATACCGATGAATTAAAGCACAGCAGCAAATGGAA TTACTTATTTACCCTTAACAACTGTGCTTATGCTAAACCCTACTAA
Upstream 100 bases:
>100_bases ACTGATACTTAGTACATATCCCACGGAAAATGGAGTTTGAGGAACAATTTGTTACTTTACCCCATATTATGGTACTAAAA AGGCGAAGGAGTGTTATCAT
Downstream 100 bases:
>100_bases AACAAAGGAATCAAACAGAAAGGGTGGTTATAATATGTCTGTTAATATTGAAGCCTTGAGGGGTTGCTCCTGGCTCCCTC TTGTGGGTTGCTTTCTGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MADNPKDKTTNQETEPVQTNAVNNFCPSCGPGTNPLQTPYPGYPCVNYKYHPTYMYVAQYAYPESLRLIVESVSGEREDE LFYNYMVSIAPAGQKDIVASIRDDEIKHNKMLRELYWELTGQEIPPAQNNTFQPPQSYCEGITSALFGELAAVERYRKIL YGLEFLPYRNMITEIYTDELKHSSKWNYLFTLNNCAYAKPY
Sequences:
>Translated_201_residues MADNPKDKTTNQETEPVQTNAVNNFCPSCGPGTNPLQTPYPGYPCVNYKYHPTYMYVAQYAYPESLRLIVESVSGEREDE LFYNYMVSIAPAGQKDIVASIRDDEIKHNKMLRELYWELTGQEIPPAQNNTFQPPQSYCEGITSALFGELAAVERYRKIL YGLEFLPYRNMITEIYTDELKHSSKWNYLFTLNNCAYAKPY >Mature_200_residues ADNPKDKTTNQETEPVQTNAVNNFCPSCGPGTNPLQTPYPGYPCVNYKYHPTYMYVAQYAYPESLRLIVESVSGEREDEL FYNYMVSIAPAGQKDIVASIRDDEIKHNKMLRELYWELTGQEIPPAQNNTFQPPQSYCEGITSALFGELAAVERYRKILY GLEFLPYRNMITEIYTDELKHSSKWNYLFTLNNCAYAKPY
Specific function: Unknown
COG id: COG1633
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23192; Mature: 23061
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNPKDKTTNQETEPVQTNAVNNFCPSCGPGTNPLQTPYPGYPCVNYKYHPTYMYVAQY CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEC AYPESLRLIVESVSGEREDELFYNYMVSIAPAGQKDIVASIRDDEIKHNKMLRELYWELT CCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHC GQEIPPAQNNTFQPPQSYCEGITSALFGELAAVERYRKILYGLEFLPYRNMITEIYTDEL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH KHSSKWNYLFTLNNCAYAKPY HCCCCCCEEEEECCEECCCCC >Mature Secondary Structure ADNPKDKTTNQETEPVQTNAVNNFCPSCGPGTNPLQTPYPGYPCVNYKYHPTYMYVAQY CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEC AYPESLRLIVESVSGEREDELFYNYMVSIAPAGQKDIVASIRDDEIKHNKMLRELYWELT CCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHC GQEIPPAQNNTFQPPQSYCEGITSALFGELAAVERYRKILYGLEFLPYRNMITEIYTDEL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH KHSSKWNYLFTLNNCAYAKPY HCCCCCCEEEEECCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA