Click here to switch to the map view.

The map label for this gene is rpfG [H]

Identifier: 134299310

GI number: 134299310

Start: 1573994

End: 1575094

Strand: Reverse

Name: rpfG [H]

Synonym: Dred_1451

Alternate gene names: 134299310

Gene position: 1575094-1573994 (Counterclockwise)

Preceding gene: 134299313

Following gene: 134299309

Centisome position: 43.65

GC content: 37.78

Gene sequence:

>1101_bases
TTGCGAAGAGTGGATATTTTTTCTTTAGAGCCCGGTATGAAGCTAGGCCGTACCGTTTATAGCAGTATGGGTGAGATACT
ACTTAAAGTAAATACCATTCTAACTCCCCGTTATATCAAAAATTTAATGGAGCTGGGAGTCCCCTACGTCTACGTGGATA
ATGGTTTACTAAAGGATTATTTAATCGAGGACATTATTACAATTGAAACTCGTACTGCTGCTGTTCAACAGATTAAAAAC
ATCCTATTAGAGACAAAAGAATCTGGAAAACTTGTCATTAAACCTTCATCTCTCTACAATACAGTGAGAGATTTTACTGA
TTCATTGTTTTCTAAAAACCATTCACTAATGTTCAATTTAACTGACTTACGAACTCAAGACGATTACACCTTTGCCCACT
CTGTTAATGTTTGTGTATTATCACTTATGACTGGAATGACATTAGGTTATACCAGCGATCAATTAGCTGTTTTGGGAGTT
GGCGCCTTATTGCACGATCTTGGCAAGGTAAAAATTCCAGATCATATTTTAAATAAACCTTCTAAATTAACAGATGCTGA
GTTTGCTATTATGCAAAAACACCCTTACTATGGCCATGAACTTATTACTTCATCCAAGGAATTAGAAAGAGAACAGGCCA
TTATTGCCTTGCAACACCATGAAAGCCTTGATGGTTCTGGTTACCCCTCTGGTTTATCAGGGCATAAATTTCATGAGTAT
GCTCAAATAGTGGCAATTGCCGATAAGTTCGATGCCCTAACAGCTAATCGGATTTATCGTAAGGCATATCCTTCCCATGA
GGCCTTTGAAATGTGTGCTGCCTCCGGAAATTACCTATTTAAGGATCATATCGTTAAAGGTTTTCTCTACAATATTGCGG
CCTATCCCAGTGGAACCCTTGTTCAATTGAACAACAAAGAAATTGCAGTGGTATTAGAAACTCCCAGGGGCTATTCGCGC
TTCCCAAAGATAAGAATACTATTTGATCACAAGCATCGTCCTATTCTGCCAACAGAGGTTTCCTTGTCAGAACATGTAGG
ATTATTTATTAGCAAGGTTCTGGATGGAAATGAAATCGCCCATATATTAAACAATACTTAA

Upstream 100 bases:

>100_bases
TAGTTTAGTTTCTTATATTTTTATTATATTTTTATTTTCAAAAGGAATATGCCGTTTATTTACAGAATTTTTTATTTACT
TACTTCAGGGGGGATGTTTT

Downstream 100 bases:

>100_bases
GATAATCCACTGGTTTATGTATAGAATAGCTAAATTCTGCTCATATTAACCTCGAACTAATATTGCCTAAATGGTTATGA
GGTGTAATATGATACCAAAA

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MRRVDIFSLEPGMKLGRTVYSSMGEILLKVNTILTPRYIKNLMELGVPYVYVDNGLLKDYLIEDIITIETRTAAVQQIKN
ILLETKESGKLVIKPSSLYNTVRDFTDSLFSKNHSLMFNLTDLRTQDDYTFAHSVNVCVLSLMTGMTLGYTSDQLAVLGV
GALLHDLGKVKIPDHILNKPSKLTDAEFAIMQKHPYYGHELITSSKELEREQAIIALQHHESLDGSGYPSGLSGHKFHEY
AQIVAIADKFDALTANRIYRKAYPSHEAFEMCAASGNYLFKDHIVKGFLYNIAAYPSGTLVQLNNKEIAVVLETPRGYSR
FPKIRILFDHKHRPILPTEVSLSEHVGLFISKVLDGNEIAHILNNT

Sequences:

>Translated_366_residues
MRRVDIFSLEPGMKLGRTVYSSMGEILLKVNTILTPRYIKNLMELGVPYVYVDNGLLKDYLIEDIITIETRTAAVQQIKN
ILLETKESGKLVIKPSSLYNTVRDFTDSLFSKNHSLMFNLTDLRTQDDYTFAHSVNVCVLSLMTGMTLGYTSDQLAVLGV
GALLHDLGKVKIPDHILNKPSKLTDAEFAIMQKHPYYGHELITSSKELEREQAIIALQHHESLDGSGYPSGLSGHKFHEY
AQIVAIADKFDALTANRIYRKAYPSHEAFEMCAASGNYLFKDHIVKGFLYNIAAYPSGTLVQLNNKEIAVVLETPRGYSR
FPKIRILFDHKHRPILPTEVSLSEHVGLFISKVLDGNEIAHILNNT
>Mature_366_residues
MRRVDIFSLEPGMKLGRTVYSSMGEILLKVNTILTPRYIKNLMELGVPYVYVDNGLLKDYLIEDIITIETRTAAVQQIKN
ILLETKESGKLVIKPSSLYNTVRDFTDSLFSKNHSLMFNLTDLRTQDDYTFAHSVNVCVLSLMTGMTLGYTSDQLAVLGV
GALLHDLGKVKIPDHILNKPSKLTDAEFAIMQKHPYYGHELITSSKELEREQAIIALQHHESLDGSGYPSGLSGHKFHEY
AQIVAIADKFDALTANRIYRKAYPSHEAFEMCAASGNYLFKDHIVKGFLYNIAAYPSGTLVQLNNKEIAVVLETPRGYSR
FPKIRILFDHKHRPILPTEVSLSEHVGLFISKVLDGNEIAHILNNT

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 41172; Mature: 41172

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVDIFSLEPGMKLGRTVYSSMGEILLKVNTILTPRYIKNLMELGVPYVYVDNGLLKDY
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCHHHHH
LIEDIITIETRTAAVQQIKNILLETKESGKLVIKPSSLYNTVRDFTDSLFSKNHSLMFNL
HHHHHHEECHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCEEEEE
TDLRTQDDYTFAHSVNVCVLSLMTGMTLGYTSDQLAVLGVGALLHDLGKVKIPDHILNKP
ECCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCC
SKLTDAEFAIMQKHPYYGHELITSSKELEREQAIIALQHHESLDGSGYPSGLSGHKFHEY
CCCCCHHHHEEECCCCCCHHHHCCHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHH
AQIVAIADKFDALTANRIYRKAYPSHEAFEMCAASGNYLFKDHIVKGFLYNIAAYPSGTL
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCE
VQLNNKEIAVVLETPRGYSRFPKIRILFDHKHRPILPTEVSLSEHVGLFISKVLDGNEIA
EEECCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCHHH
HILNNT
HHHCCC
>Mature Secondary Structure
MRRVDIFSLEPGMKLGRTVYSSMGEILLKVNTILTPRYIKNLMELGVPYVYVDNGLLKDY
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCHHHHH
LIEDIITIETRTAAVQQIKNILLETKESGKLVIKPSSLYNTVRDFTDSLFSKNHSLMFNL
HHHHHHEECHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCEEEEE
TDLRTQDDYTFAHSVNVCVLSLMTGMTLGYTSDQLAVLGVGALLHDLGKVKIPDHILNKP
ECCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCC
SKLTDAEFAIMQKHPYYGHELITSSKELEREQAIIALQHHESLDGSGYPSGLSGHKFHEY
CCCCCHHHHEEECCCCCCHHHHCCHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHH
AQIVAIADKFDALTANRIYRKAYPSHEAFEMCAASGNYLFKDHIVKGFLYNIAAYPSGTL
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCE
VQLNNKEIAVVLETPRGYSRFPKIRILFDHKHRPILPTEVSLSEHVGLFISKVLDGNEIA
EEECCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCHHH
HILNNT
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]