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The map label for this gene is intQ [C]

Identifier: 134299045

GI number: 134299045

Start: 1258679

End: 1259809

Strand: Reverse

Name: intQ [C]

Synonym: Dred_1182

Alternate gene names: 134299045

Gene position: 1259809-1258679 (Counterclockwise)

Preceding gene: 134299046

Following gene: 134299039

Centisome position: 34.92

GC content: 46.33

Gene sequence:

>1131_bases
TTGGCTAGCTTTAAAAAGCGACCAAATGGAACATGGCAGGCTACCATTTATGTAGGCCGGGATTCAAACGGAAAGCAGCT
GTTCAAATACGTTACCTGTGACTCGCTAAAAGAAGCAAAGAGTAAGGCCCGGGAGATCGAACAAGAGATAGAAGAAGGGC
GCTTCGTCCACCTCGACAATACCAGGGTCGTAGCCTGGATTGAGAAGTGGATGGAAACTAAAACGCTCTCGCCGTCCACC
AGGGCCACATACAAAAGTTATATTAAGAACCATTATACCCCTTATTTCGGAAATTTGAAGCTAAAACAGTTAAATGAGAT
CCACATTAAGAGATTCATGGCCGAGAAAAGTAAAACAGTTTCTCAGGCCAGTGTGCGCCGCATGACATCAGTGCTTAAAA
CTTCCCTTGCAGATGTAATGAAGCAAAAAAGCCCGGCCAAGGACATCAAGCTGCCGAAAGAGGAAAAGTATACGCCCAGG
GTCCCCAACGATAAAGAGATGGAAACCATCCACAATGCAGTTAGGGGTACCAGGGACGAACCCATAGTGCTTTTAGCAGC
TTGGTGCGGATTGCGCCGAGGTGAAATTTTTGCTTTGCGCTGGAATGATATCGATTGGAATAATGGCACTCTCAGAGTTG
ATGAAGCAAAGAGTATAAATGAGGATAATTTATACGAGGATAAACGGCCCAAAAGCGAAAACGGACTCCGCGAAGTAATT
GTGCCGGAATACTTAATGGGGCTGCTTGAGGATATGCGAAAGCCTAAAAAGCGGAAAAGAAAAAAGAAGGACCAGGAGCC
GACCAACATCGTAGAGATAAGCAATAACTCAGATCACCAGATATTTAACATGCGCCCGGACAGTTACTCGAGCTATTGGG
CAGCATTCGTGCGAAATAAAAAGCTGCCAGAAATAAGATTTCACGACCTGCGGCACTACCACGCCAGCTGGCTATACGCC
AGGGGAATACCGGACCAATATGCCGCCCAAAGGCTAGGACACGACATACGAGTTCTAAAGACGATATACCAGCACCTGGG
CCTGGACAGGCAGCATGAGATAGACAACAACATCAGGCAGATGTATGACAACCAAAACAAAAAAGAAGAAACCCGCCAAA
CTTCCGAGTAA

Upstream 100 bases:

>100_bases
GAATGGTAAACAGATTCGTAGATACGTTACTGGACAATATTTGAAGGAGGTCAAGAGAGCAGCCAGGGCCATAGAGATGG
CTAAAAAGGAGTTGAAGTAA

Downstream 100 bases:

>100_bases
GGCGGGTTTCCTTTTAAAAATTTTGTTAGGCATTTGTTGGGCATTGGCCCTTTTTTGCTGCCCAACGGGAACCGCTCTCA
GCCCCCGTGTACCAACTGGT

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MASFKKRPNGTWQATIYVGRDSNGKQLFKYVTCDSLKEAKSKAREIEQEIEEGRFVHLDNTRVVAWIEKWMETKTLSPST
RATYKSYIKNHYTPYFGNLKLKQLNEIHIKRFMAEKSKTVSQASVRRMTSVLKTSLADVMKQKSPAKDIKLPKEEKYTPR
VPNDKEMETIHNAVRGTRDEPIVLLAAWCGLRRGEIFALRWNDIDWNNGTLRVDEAKSINEDNLYEDKRPKSENGLREVI
VPEYLMGLLEDMRKPKKRKRKKKDQEPTNIVEISNNSDHQIFNMRPDSYSSYWAAFVRNKKLPEIRFHDLRHYHASWLYA
RGIPDQYAAQRLGHDIRVLKTIYQHLGLDRQHEIDNNIRQMYDNQNKKEETRQTSE

Sequences:

>Translated_376_residues
MASFKKRPNGTWQATIYVGRDSNGKQLFKYVTCDSLKEAKSKAREIEQEIEEGRFVHLDNTRVVAWIEKWMETKTLSPST
RATYKSYIKNHYTPYFGNLKLKQLNEIHIKRFMAEKSKTVSQASVRRMTSVLKTSLADVMKQKSPAKDIKLPKEEKYTPR
VPNDKEMETIHNAVRGTRDEPIVLLAAWCGLRRGEIFALRWNDIDWNNGTLRVDEAKSINEDNLYEDKRPKSENGLREVI
VPEYLMGLLEDMRKPKKRKRKKKDQEPTNIVEISNNSDHQIFNMRPDSYSSYWAAFVRNKKLPEIRFHDLRHYHASWLYA
RGIPDQYAAQRLGHDIRVLKTIYQHLGLDRQHEIDNNIRQMYDNQNKKEETRQTSE
>Mature_375_residues
ASFKKRPNGTWQATIYVGRDSNGKQLFKYVTCDSLKEAKSKAREIEQEIEEGRFVHLDNTRVVAWIEKWMETKTLSPSTR
ATYKSYIKNHYTPYFGNLKLKQLNEIHIKRFMAEKSKTVSQASVRRMTSVLKTSLADVMKQKSPAKDIKLPKEEKYTPRV
PNDKEMETIHNAVRGTRDEPIVLLAAWCGLRRGEIFALRWNDIDWNNGTLRVDEAKSINEDNLYEDKRPKSENGLREVIV
PEYLMGLLEDMRKPKKRKRKKKDQEPTNIVEISNNSDHQIFNMRPDSYSSYWAAFVRNKKLPEIRFHDLRHYHASWLYAR
GIPDQYAAQRLGHDIRVLKTIYQHLGLDRQHEIDNNIRQMYDNQNKKEETRQTSE

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 44391; Mature: 44260

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASFKKRPNGTWQATIYVGRDSNGKQLFKYVTCDSLKEAKSKAREIEQEIEEGRFVHLDN
CCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
TRVVAWIEKWMETKTLSPSTRATYKSYIKNHYTPYFGNLKLKQLNEIHIKRFMAEKSKTV
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHH
SQASVRRMTSVLKTSLADVMKQKSPAKDIKLPKEEKYTPRVPNDKEMETIHNAVRGTRDE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
PIVLLAAWCGLRRGEIFALRWNDIDWNNGTLRVDEAKSINEDNLYEDKRPKSENGLREVI
CEEEEEECCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH
VPEYLMGLLEDMRKPKKRKRKKKDQEPTNIVEISNNSDHQIFNMRPDSYSSYWAAFVRNK
HHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCHHHHHHHHHHCC
KLPEIRFHDLRHYHASWLYARGIPDQYAAQRLGHDIRVLKTIYQHLGLDRQHEIDNNIRQ
CCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH
MYDNQNKKEETRQTSE
HHCCCCHHHHHHCCCC
>Mature Secondary Structure 
ASFKKRPNGTWQATIYVGRDSNGKQLFKYVTCDSLKEAKSKAREIEQEIEEGRFVHLDN
CCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
TRVVAWIEKWMETKTLSPSTRATYKSYIKNHYTPYFGNLKLKQLNEIHIKRFMAEKSKTV
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHH
SQASVRRMTSVLKTSLADVMKQKSPAKDIKLPKEEKYTPRVPNDKEMETIHNAVRGTRDE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
PIVLLAAWCGLRRGEIFALRWNDIDWNNGTLRVDEAKSINEDNLYEDKRPKSENGLREVI
CEEEEEECCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH
VPEYLMGLLEDMRKPKKRKRKKKDQEPTNIVEISNNSDHQIFNMRPDSYSSYWAAFVRNK
HHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCHHHHHHHHHHCC
KLPEIRFHDLRHYHASWLYARGIPDQYAAQRLGHDIRVLKTIYQHLGLDRQHEIDNNIRQ
CCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH
MYDNQNKKEETRQTSE
HHCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]