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The map label for this gene is 134298860

Identifier: 134298860

GI number: 134298860

Start: 1051000

End: 1051404

Strand: Reverse

Name: 134298860

Synonym: Dred_0996

Alternate gene names: NA

Gene position: 1051404-1051000 (Counterclockwise)

Preceding gene: 134298861

Following gene: 134298832

Centisome position: 29.14

GC content: 36.05

Gene sequence:

>405_bases
GTGGATATTTTAAAAAGCTTAACGGATTTGAATTCTGTTGGCGGTAGGATTAGATATTACCGGTTAGCTCATGGTCTTCT
TCAAGAAGATGTAGCCACAAAAGCCGGTATAGATGTTTGTACAGTAAAAAGATATGAGAACAACCAACGTGAGGAATCTC
TTGAGATATGTAATAAAATAGCGGAGGCTATTGGAATTGATCCAAAACTATTATACGATGAATATTTGTCTTTTACCGCA
TCCGACTACGGTAAAAGAATTAAATCATCCCGCATTAAGTTAAATCTTACTCAGCAGGACTTTGGTCAACTTTTAGGTGT
ACATAGAAAAACTGTTGTCTGCTGGGAGAAAGCCCGTAAAAAACCCCTAAGAGAACACTATTTATTGCTTGCTAAATTTT
TATGA

Upstream 100 bases:

>100_bases
CCTTTAAAGCTGATAAGGGCACCCGTCTAGCAACCTATGCCGCCCGATGTATTGAGAATGCAATTCTCCCATAACGGAAA
CATTTTACTACGCTCAAAGT

Downstream 100 bases:

>100_bases
TTTAAGATTTTCTCTTTCTAATTATAAAGTTCAGCAAGTCCTTTACCACAGAGGTAAAATGACTTGCTAAACTTTATTCC
CATCTAATATAACGTATTCT

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MDILKSLTDLNSVGGRIRYYRLAHGLLQEDVATKAGIDVCTVKRYENNQREESLEICNKIAEAIGIDPKLLYDEYLSFTA
SDYGKRIKSSRIKLNLTQQDFGQLLGVHRKTVVCWEKARKKPLREHYLLLAKFL

Sequences:

>Translated_134_residues
MDILKSLTDLNSVGGRIRYYRLAHGLLQEDVATKAGIDVCTVKRYENNQREESLEICNKIAEAIGIDPKLLYDEYLSFTA
SDYGKRIKSSRIKLNLTQQDFGQLLGVHRKTVVCWEKARKKPLREHYLLLAKFL
>Mature_134_residues
MDILKSLTDLNSVGGRIRYYRLAHGLLQEDVATKAGIDVCTVKRYENNQREESLEICNKIAEAIGIDPKLLYDEYLSFTA
SDYGKRIKSSRIKLNLTQQDFGQLLGVHRKTVVCWEKARKKPLREHYLLLAKFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15460; Mature: 15460

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILKSLTDLNSVGGRIRYYRLAHGLLQEDVATKAGIDVCTVKRYENNQREESLEICNKI
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCHHHHHHHHHHH
AEAIGIDPKLLYDEYLSFTASDYGKRIKSSRIKLNLTQQDFGQLLGVHRKTVVCWEKARK
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHC
KPLREHYLLLAKFL
CHHHHHHHHHHHCC
>Mature Secondary Structure
MDILKSLTDLNSVGGRIRYYRLAHGLLQEDVATKAGIDVCTVKRYENNQREESLEICNKI
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCHHHHHHHHHHH
AEAIGIDPKLLYDEYLSFTASDYGKRIKSSRIKLNLTQQDFGQLLGVHRKTVVCWEKARK
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHC
KPLREHYLLLAKFL
CHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA