| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134298745
Identifier: 134298745
GI number: 134298745
Start: 939594
End: 941141
Strand: Reverse
Name: 134298745
Synonym: Dred_0879
Alternate gene names: NA
Gene position: 941141-939594 (Counterclockwise)
Preceding gene: 134298746
Following gene: 134298744
Centisome position: 26.08
GC content: 36.24
Gene sequence:
>1548_bases ATGACAACAAAAACAGTTTCCGTTAAAACATTGGACCTCATATTGGATTACGCCAATCCTCGATTTATTGTACCTCCCTC ACCGACCCAAGAAGAGATTAGATTATACCTATTTCGCTTTGAGGAAATTGTATCTCTTGCCAAAAGTATTGCTTCCTACG AAGGTCTTATGCCCGGTGAAAGAGTTATTGTTTGTAAAGAAAATAGTGGATACATTATTCTAGAAGGAAATCGCCGAATT TGTGCTTGCCAATGCCTTTTATCCCCAGAGTTAATTCCTGATCCATTCAAAAAGACAGGTTTTTCTTTAGCCTCTGAAGA AACAAAATTAAATATAGAAAATATTGAAGTAGATTTGATTTCATCAAGACAAGAGGCACAAAAAGTATTAGCTACACGCC ATATAGAAGGTGTAAAAAAATGGCCTCCATTAGCTAGAATGATGTTTTCTCATAATCATTATCAAAATGGAAAAACTGTG GAACAGATTGCTGAACTAACAGATCTTGATCTTAGTACGGTTAAAACCCACATTCAAGAGTACAAGCTACTTATGCATGG ACTTGATTTGTCGGTATGGTCTCCTGACGAAAAAGTTAGACTGGACTTACATCAATTAGAAATTGATAAGTATCTGCGAC TATTTCGTACCAGTGGCACAAAAAAAGCTTTGCAAATGAACTTTAATAAACAAACTATGGAACCACAATCCTCCTTACAT CCTACACTATTTAAAAAAGCTATTGAATTAATTATGCGTGCTGCTTTCCTGGACAAGACCATCGATACTCGGACAATGTC ATATGAAAAAGTACCCGGGATCGTAAATCTACTCAAGAATAAGGGTGAGGGTGAATCTGTTGTTAAACCAACTCTACTCC CCCCGAAAGAAACCGCTAATGATAAAAATACTTCATCCGATAACCAAGTTAACCCAAATTTAGCTACAGAAAAACCGGAG AAAAAAACACCTACTCCACACAAAACAAAAGATAAAGAACAACCACTTCCACCAAAACAACCAGACCCTAAAATAGAACC ACAAAAGAAACCTGCAAAGGTTCAGGTACCTAAGTTTTTTGAAAACCTAGACTTGGTCTTGGATGAAAAAAAGCCAGATG AATTAGCTGTTATGCTACTTGCCGAAGAAATACGTCGTATGTCCGAAAATAAAACATCAACTCAAAAATATTATCAATAT TTTCCCATTTCAACTACTATCCTACTTCGGTCTTTACTTGAACAAACATTTAAGTATTTTCTTAAGAAGGAAGGACACTG GGGTAACGTAAAAACAAGACCCGATGACCCTGCACTGAAGGAGTTACTAACATATATCCAAAATAACAAAAAGTCCTTAT TTCCTGACAGCACAGTGCTCAGAGCATTTGACGCTGTATTTAAAAATGATGGTTTAAAGACTCATTTAGATTTAGTTGTA CATCAAACGGGAGCTAGCCGCCCAACTGCTGATATGCTGGAAACCATAGCAACTACTGGATTGTTTACAGTAATTAACTA CATTTTGAACAAACATTATAGCACATAA
Upstream 100 bases:
>100_bases TGAAATAAAGTGGCAATTGCTTTAATGCTGGGCGTTCACTTAAGTGAACAAATAATTTCTGGGTGGAATAACTATATCAT ACCAAAAGGAGAAATGTTTT
Downstream 100 bases:
>100_bases AAAATTACTGGCCAAAAAAGAACCTTTTGTATATAATGGCTTTAGACCTTGACTTCTTAAGGAAGGAATGTGGCAATGCC AGTTCAAAATGCTAAACTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 515; Mature: 514
Protein sequence:
>515_residues MTTKTVSVKTLDLILDYANPRFIVPPSPTQEEIRLYLFRFEEIVSLAKSIASYEGLMPGERVIVCKENSGYIILEGNRRI CACQCLLSPELIPDPFKKTGFSLASEETKLNIENIEVDLISSRQEAQKVLATRHIEGVKKWPPLARMMFSHNHYQNGKTV EQIAELTDLDLSTVKTHIQEYKLLMHGLDLSVWSPDEKVRLDLHQLEIDKYLRLFRTSGTKKALQMNFNKQTMEPQSSLH PTLFKKAIELIMRAAFLDKTIDTRTMSYEKVPGIVNLLKNKGEGESVVKPTLLPPKETANDKNTSSDNQVNPNLATEKPE KKTPTPHKTKDKEQPLPPKQPDPKIEPQKKPAKVQVPKFFENLDLVLDEKKPDELAVMLLAEEIRRMSENKTSTQKYYQY FPISTTILLRSLLEQTFKYFLKKEGHWGNVKTRPDDPALKELLTYIQNNKKSLFPDSTVLRAFDAVFKNDGLKTHLDLVV HQTGASRPTADMLETIATTGLFTVINYILNKHYST
Sequences:
>Translated_515_residues MTTKTVSVKTLDLILDYANPRFIVPPSPTQEEIRLYLFRFEEIVSLAKSIASYEGLMPGERVIVCKENSGYIILEGNRRI CACQCLLSPELIPDPFKKTGFSLASEETKLNIENIEVDLISSRQEAQKVLATRHIEGVKKWPPLARMMFSHNHYQNGKTV EQIAELTDLDLSTVKTHIQEYKLLMHGLDLSVWSPDEKVRLDLHQLEIDKYLRLFRTSGTKKALQMNFNKQTMEPQSSLH PTLFKKAIELIMRAAFLDKTIDTRTMSYEKVPGIVNLLKNKGEGESVVKPTLLPPKETANDKNTSSDNQVNPNLATEKPE KKTPTPHKTKDKEQPLPPKQPDPKIEPQKKPAKVQVPKFFENLDLVLDEKKPDELAVMLLAEEIRRMSENKTSTQKYYQY FPISTTILLRSLLEQTFKYFLKKEGHWGNVKTRPDDPALKELLTYIQNNKKSLFPDSTVLRAFDAVFKNDGLKTHLDLVV HQTGASRPTADMLETIATTGLFTVINYILNKHYST >Mature_514_residues TTKTVSVKTLDLILDYANPRFIVPPSPTQEEIRLYLFRFEEIVSLAKSIASYEGLMPGERVIVCKENSGYIILEGNRRIC ACQCLLSPELIPDPFKKTGFSLASEETKLNIENIEVDLISSRQEAQKVLATRHIEGVKKWPPLARMMFSHNHYQNGKTVE QIAELTDLDLSTVKTHIQEYKLLMHGLDLSVWSPDEKVRLDLHQLEIDKYLRLFRTSGTKKALQMNFNKQTMEPQSSLHP TLFKKAIELIMRAAFLDKTIDTRTMSYEKVPGIVNLLKNKGEGESVVKPTLLPPKETANDKNTSSDNQVNPNLATEKPEK KTPTPHKTKDKEQPLPPKQPDPKIEPQKKPAKVQVPKFFENLDLVLDEKKPDELAVMLLAEEIRRMSENKTSTQKYYQYF PISTTILLRSLLEQTFKYFLKKEGHWGNVKTRPDDPALKELLTYIQNNKKSLFPDSTVLRAFDAVFKNDGLKTHLDLVVH QTGASRPTADMLETIATTGLFTVINYILNKHYST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58851; Mature: 58720
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKTVSVKTLDLILDYANPRFIVPPSPTQEEIRLYLFRFEEIVSLAKSIASYEGLMPGE CCCCEEEHEEEEHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RVIVCKENSGYIILEGNRRICACQCLLSPELIPDPFKKTGFSLASEETKLNIENIEVDLI EEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCEEEHEEEEEEEC SSRQEAQKVLATRHIEGVKKWPPLARMMFSHNHYQNGKTVEQIAELTDLDLSTVKTHIQE CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH YKLLMHGLDLSVWSPDEKVRLDLHQLEIDKYLRLFRTSGTKKALQMNFNKQTMEPQSSLH HHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHCCCHHCCC PTLFKKAIELIMRAAFLDKTIDTRTMSYEKVPGIVNLLKNKGEGESVVKPTLLPPKETAN HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC DKNTSSDNQVNPNLATEKPEKKTPTPHKTKDKEQPLPPKQPDPKIEPQKKPAKVQVPKFF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHH ENLDLVLDEKKPDELAVMLLAEEIRRMSENKTSTQKYYQYFPISTTILLRSLLEQTFKYF CCCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LKKEGHWGNVKTRPDDPALKELLTYIQNNKKSLFPDSTVLRAFDAVFKNDGLKTHLDLVV HHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEE HQTGASRPTADMLETIATTGLFTVINYILNKHYST ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTKTVSVKTLDLILDYANPRFIVPPSPTQEEIRLYLFRFEEIVSLAKSIASYEGLMPGE CCCEEEHEEEEHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RVIVCKENSGYIILEGNRRICACQCLLSPELIPDPFKKTGFSLASEETKLNIENIEVDLI EEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCHHHCCCCCCCCCCEEEHEEEEEEEC SSRQEAQKVLATRHIEGVKKWPPLARMMFSHNHYQNGKTVEQIAELTDLDLSTVKTHIQE CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH YKLLMHGLDLSVWSPDEKVRLDLHQLEIDKYLRLFRTSGTKKALQMNFNKQTMEPQSSLH HHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHCCCHHCCC PTLFKKAIELIMRAAFLDKTIDTRTMSYEKVPGIVNLLKNKGEGESVVKPTLLPPKETAN HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC DKNTSSDNQVNPNLATEKPEKKTPTPHKTKDKEQPLPPKQPDPKIEPQKKPAKVQVPKFF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHH ENLDLVLDEKKPDELAVMLLAEEIRRMSENKTSTQKYYQYFPISTTILLRSLLEQTFKYF CCCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LKKEGHWGNVKTRPDDPALKELLTYIQNNKKSLFPDSTVLRAFDAVFKNDGLKTHLDLVV HHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEE HQTGASRPTADMLETIATTGLFTVINYILNKHYST ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA