| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134298744
Identifier: 134298744
GI number: 134298744
Start: 938628
End: 939518
Strand: Reverse
Name: 134298744
Synonym: Dred_0878
Alternate gene names: NA
Gene position: 939518-938628 (Counterclockwise)
Preceding gene: 134298745
Following gene: 134298742
Centisome position: 26.04
GC content: 35.69
Gene sequence:
>891_bases ATGCCAGTTCAAAATGCTAAACTCAGCCCATTACGTTACCCAGGAAGTAAAGCTATACTAACGAACTATATCAGCAGCGT GCTTGAAGAAAATTACTTGACTGATTGTACAATCGTAGAGCCCTATGCAGGGAGTGCTGTTGTGTCTTTAGCGTTGCTAG AATCGCTTGTAGCTGAAAAAGCAATTCTCGTAGAGCGTGATCCGTTAGTTTACTCATTTTGGCAATCAGTCTTTAACCAT ACTTATTTATTAATAGAAAAGATTTATAATCTGCCAATAACTATTGATACTTGGAATGCCTTTCAGATATACCGAAAATG TGATAACATTTCATCTCATACAGTAGTAGATTTAGGACTGGCTGGACTATTCTATAATAGAACTAATTTTTCTGGCATTC TAAAAGCAGGGCCACTTGGCGGGCATAATCAATCTTCTCAGTATAAGATTGATTGCAGATTCAATAAACACAATATTATT TCACAAATCGAGAGGCTTTCAAAGTTTAAAAATAGAGTTGAAGTATTCTTTGGTGACGCAATGGAATTTCTCAAGCAAAA CAAAAAAAACTTTTTAAAAGGCAATTTCTTTTTATACGCAGATCCCCCTTACTATCTTAAAGGTAAAAGCTTATATCGCT ATTGGTATGAGCACAAAGAACATAAAGCACTAGCAAAATTCCTACTTTCAAGTAACTGCAATTGGCTAGTAAGTTATGAC GATCATGCAGAGATACGCAAGATGTATTCTAATGAGATTAGCTTGATCCCTGTATATTTTGATTATTCATTGACTAGCCC CAGACGGGAAAGAGAGCTACTTATATCAAATTTAGCATTACCACCAATAGCTTTTTGCCATGAGAACCTACAGCCAATAA CTACGGCATAA
Upstream 100 bases:
>100_bases TTTGAACAAACATTATAGCACATAAAAAATTACTGGCCAAAAAAGAACCTTTTGTATATAATGGCTTTAGACCTTGACTT CTTAAGGAAGGAATGTGGCA
Downstream 100 bases:
>100_bases TATAATGTGAACTACCGCGGGCACAAGGCCGCGCGGCTTCCGGTGGTAACTCCAAGCCTTCTGCGTGAAACAGTGGCTTC TCATTATTCCCCGGTTAGCC
Product: D12 class N6 adenine-specific DNA methyltransferase
Products: NA
Alternate protein names: DNA-Methyltransferase; DNA Methyltransferase; Adenine-Specific DNA Methyltransferase; Site-Specific DNA Methylase; Site-Specific DNA-Methyltransferase; Prophage DNA Adenine Methylase; N6 Adenine-Specific DNA Methyltransferase
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MPVQNAKLSPLRYPGSKAILTNYISSVLEENYLTDCTIVEPYAGSAVVSLALLESLVAEKAILVERDPLVYSFWQSVFNH TYLLIEKIYNLPITIDTWNAFQIYRKCDNISSHTVVDLGLAGLFYNRTNFSGILKAGPLGGHNQSSQYKIDCRFNKHNII SQIERLSKFKNRVEVFFGDAMEFLKQNKKNFLKGNFFLYADPPYYLKGKSLYRYWYEHKEHKALAKFLLSSNCNWLVSYD DHAEIRKMYSNEISLIPVYFDYSLTSPRRERELLISNLALPPIAFCHENLQPITTA
Sequences:
>Translated_296_residues MPVQNAKLSPLRYPGSKAILTNYISSVLEENYLTDCTIVEPYAGSAVVSLALLESLVAEKAILVERDPLVYSFWQSVFNH TYLLIEKIYNLPITIDTWNAFQIYRKCDNISSHTVVDLGLAGLFYNRTNFSGILKAGPLGGHNQSSQYKIDCRFNKHNII SQIERLSKFKNRVEVFFGDAMEFLKQNKKNFLKGNFFLYADPPYYLKGKSLYRYWYEHKEHKALAKFLLSSNCNWLVSYD DHAEIRKMYSNEISLIPVYFDYSLTSPRRERELLISNLALPPIAFCHENLQPITTA >Mature_295_residues PVQNAKLSPLRYPGSKAILTNYISSVLEENYLTDCTIVEPYAGSAVVSLALLESLVAEKAILVERDPLVYSFWQSVFNHT YLLIEKIYNLPITIDTWNAFQIYRKCDNISSHTVVDLGLAGLFYNRTNFSGILKAGPLGGHNQSSQYKIDCRFNKHNIIS QIERLSKFKNRVEVFFGDAMEFLKQNKKNFLKGNFFLYADPPYYLKGKSLYRYWYEHKEHKALAKFLLSSNCNWLVSYDD HAEIRKMYSNEISLIPVYFDYSLTSPRRERELLISNLALPPIAFCHENLQPITTA
Specific function: Unknown
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34201; Mature: 34069
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVQNAKLSPLRYPGSKAILTNYISSVLEENYLTDCTIVEPYAGSAVVSLALLESLVAEK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHH AILVERDPLVYSFWQSVFNHTYLLIEKIYNLPITIDTWNAFQIYRKCDNISSHTVVDLGL HHEEECCCHHHHHHHHHHCCHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCEEEHHHH AGLFYNRTNFSGILKAGPLGGHNQSSQYKIDCRFNKHNIISQIERLSKFKNRVEVFFGDA HHHEECCCCCCCEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH MEFLKQNKKNFLKGNFFLYADPPYYLKGKSLYRYWYEHKEHKALAKFLLSSNCNWLVSYD HHHHHHHHHHHCCCCEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC DHAEIRKMYSNEISLIPVYFDYSLTSPRRERELLISNLALPPIAFCHENLQPITTA CHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCC >Mature Secondary Structure PVQNAKLSPLRYPGSKAILTNYISSVLEENYLTDCTIVEPYAGSAVVSLALLESLVAEK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHH AILVERDPLVYSFWQSVFNHTYLLIEKIYNLPITIDTWNAFQIYRKCDNISSHTVVDLGL HHEEECCCHHHHHHHHHHCCHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCEEEHHHH AGLFYNRTNFSGILKAGPLGGHNQSSQYKIDCRFNKHNIISQIERLSKFKNRVEVFFGDA HHHEECCCCCCCEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH MEFLKQNKKNFLKGNFFLYADPPYYLKGKSLYRYWYEHKEHKALAKFLLSSNCNWLVSYD HHHHHHHHHHHCCCCEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC DHAEIRKMYSNEISLIPVYFDYSLTSPRRERELLISNLALPPIAFCHENLQPITTA CHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA