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The map label for this gene is xre [H]

Identifier: 134298370

GI number: 134298370

Start: 536731

End: 537033

Strand: Reverse

Name: xre [H]

Synonym: Dred_0495

Alternate gene names: 134298370

Gene position: 537033-536731 (Counterclockwise)

Preceding gene: 134298373

Following gene: 134298369

Centisome position: 14.88

GC content: 45.54

Gene sequence:

>303_bases
TTGACACAAGAACAGCTGGCCCAACAGCTCGGTTTTACTCGCGGCCAGGTTAGTAACTATGAACAAGGTTCGAGGGAACC
GGATTTTGAAACACTAAAAAAAATTGCCGATTTTTTCAAGGTGACTACAGATTATATGCTAGGACGCACCGACGATCCCA
CACCAGTGGACAAACTCATCGAACTCAGCGCCCTAGCTGGACAACAAAAGTTTGACCCTATGAAAGAGTTACCCCCAGAA
GCCCAGCGCAGCCTAGAGGATTTCATCGATTACCTAATGCGCAAATACAAAAAAGACCATTAA

Upstream 100 bases:

>100_bases
TTAAAACAGGTGGAAACTGCTTTATGGGTATCACTGGCTCCCCCAGGGGAATGGGTTTCTGATACCTTAGCTTCGTTCCA
CACTGCTGGCAAAGCATGAA

Downstream 100 bases:

>100_bases
TGCAACGGAGAGGATCTATGCCTGACAGACTATTTGAACTTGCGGCTCAGGAAAGAATAAAAATTGAATATTGGGAGTTT
GCCCCTCCGCTATTGGCAGT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Putative pbsX repressor [H]

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MTQEQLAQQLGFTRGQVSNYEQGSREPDFETLKKIADFFKVTTDYMLGRTDDPTPVDKLIELSALAGQQKFDPMKELPPE
AQRSLEDFIDYLMRKYKKDH

Sequences:

>Translated_100_residues
MTQEQLAQQLGFTRGQVSNYEQGSREPDFETLKKIADFFKVTTDYMLGRTDDPTPVDKLIELSALAGQQKFDPMKELPPE
AQRSLEDFIDYLMRKYKKDH
>Mature_99_residues
TQEQLAQQLGFTRGQVSNYEQGSREPDFETLKKIADFFKVTTDYMLGRTDDPTPVDKLIELSALAGQQKFDPMKELPPEA
QRSLEDFIDYLMRKYKKDH

Specific function: Probable repressor. Necessary for the maintenance of the lysogenic state [H]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 11649; Mature: 11518

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQEQLAQQLGFTRGQVSNYEQGSREPDFETLKKIADFFKVTTDYMLGRTDDPTPVDKLI
CCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ELSALAGQQKFDPMKELPPEAQRSLEDFIDYLMRKYKKDH
HHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TQEQLAQQLGFTRGQVSNYEQGSREPDFETLKKIADFFKVTTDYMLGRTDDPTPVDKLI
CHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ELSALAGQQKFDPMKELPPEAQRSLEDFIDYLMRKYKKDH
HHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2125016; 8083174; 9384377 [H]