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The map label for this gene is yrdA [C]

Identifier: 134298353

GI number: 134298353

Start: 521879

End: 522391

Strand: Reverse

Name: yrdA [C]

Synonym: Dred_0478

Alternate gene names: 134298353

Gene position: 522391-521879 (Counterclockwise)

Preceding gene: 134298354

Following gene: 134298348

Centisome position: 14.48

GC content: 46.98

Gene sequence:

>513_bases
TTGATACTCCCCTACCTTGAATACAGTCCCCATATACACCCCTCTGTGTACATCGCACCCACCGCAACGGTTGTAGGCCA
TGTTGAAATTCATGAGCACGCAAGTATCTGGTATAATGCGGTGATCCGGGGAGATGTTGATAGGATTTCCATCGGTAAAA
AAACAAACATACAGGATGGCTGTATGCTGCATCAAGATGCAGGTTTTCCTTTGTTAATTGGTGAGAATGTTACGGTAGGG
CATCACACCATTTTACATGGCTGTACCATTGGAGACAGATGCTTAATTGGTATGGGTGCCATCATCTTAAACGGAGCTTA
CATTGGTTCGGAGTCACTCATAGGGGCAGGGACCTTGGTGAAGGAAGGCCAAGAAATTCCCCCGGGCGTTTTAGCGGTGG
GGTCTCCTGCTAGAGTTGTTCGAAAGCTGACCGAGGAAGAAAAGCAAAAGCTAAGCCAGTCCGCCCAGCACTACTTCAAT
ATGGCTGAAAAACATAGCATCAGCCAAAAGTAA

Upstream 100 bases:

>100_bases
AGAGAACAGTATTTATATCCAATTATAAAATAATCCCAACCGGTATGGTTGGGATCGTTTTATAAATAACATAAAATATT
TTAAAAGGAGGTAGTCAGCT

Downstream 100 bases:

>100_bases
ATGAGACCAGGCCCAAGGGCCTAGTCTCATTTACTCTTCTACCTTATCATTGTTTATTCCTTTACCCTTTTCAAACTGCT
CTTTAGATAGGTAAAATACA

Product: anhydrase family 3 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MILPYLEYSPHIHPSVYIAPTATVVGHVEIHEHASIWYNAVIRGDVDRISIGKKTNIQDGCMLHQDAGFPLLIGENVTVG
HHTILHGCTIGDRCLIGMGAIILNGAYIGSESLIGAGTLVKEGQEIPPGVLAVGSPARVVRKLTEEEKQKLSQSAQHYFN
MAEKHSISQK

Sequences:

>Translated_170_residues
MILPYLEYSPHIHPSVYIAPTATVVGHVEIHEHASIWYNAVIRGDVDRISIGKKTNIQDGCMLHQDAGFPLLIGENVTVG
HHTILHGCTIGDRCLIGMGAIILNGAYIGSESLIGAGTLVKEGQEIPPGVLAVGSPARVVRKLTEEEKQKLSQSAQHYFN
MAEKHSISQK
>Mature_170_residues
MILPYLEYSPHIHPSVYIAPTATVVGHVEIHEHASIWYNAVIRGDVDRISIGKKTNIQDGCMLHQDAGFPLLIGENVTVG
HHTILHGCTIGDRCLIGMGAIILNGAYIGSESLIGAGTLVKEGQEIPPGVLAVGSPARVVRKLTEEEKQKLSQSAQHYFN
MAEKHSISQK

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=172, Percent_Identity=43.6046511627907, Blast_Score=150, Evalue=6e-38,
Organism=Escherichia coli, GI1787667, Length=153, Percent_Identity=38.562091503268, Blast_Score=114, Evalue=2e-27,
Organism=Escherichia coli, GI87081681, Length=159, Percent_Identity=35.2201257861635, Blast_Score=110, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18423; Mature: 18423

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILPYLEYSPHIHPSVYIAPTATVVGHVEIHEHASIWYNAVIRGDVDRISIGKKTNIQDG
CCCCCCCCCCCCCCEEEEEECEEEEEEEEECCCHHEEEEEEEECCCCEEECCCCCCCCCC
CMLHQDAGFPLLIGENVTVGHHTILHGCTIGDRCLIGMGAIILNGAYIGSESLIGAGTLV
EEEECCCCCEEEECCCEEECCCEEEECCCCCCHHHHHHHHHHHCCEEECCCCCCCCCHHH
KEGQEIPPGVLAVGSPARVVRKLTEEEKQKLSQSAQHYFNMAEKHSISQK
HCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MILPYLEYSPHIHPSVYIAPTATVVGHVEIHEHASIWYNAVIRGDVDRISIGKKTNIQDG
CCCCCCCCCCCCCCEEEEEECEEEEEEEEECCCHHEEEEEEEECCCCEEECCCCCCCCCC
CMLHQDAGFPLLIGENVTVGHHTILHGCTIGDRCLIGMGAIILNGAYIGSESLIGAGTLV
EEEECCCCCEEEECCCEEECCCEEEECCCCCCHHHHHHHHHHHCCEEECCCCCCCCCHHH
KEGQEIPPGVLAVGSPARVVRKLTEEEKQKLSQSAQHYFNMAEKHSISQK
HCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]