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The map label for this gene is opuAC [H]

Identifier: 134298348

GI number: 134298348

Start: 516188

End: 517042

Strand: Reverse

Name: opuAC [H]

Synonym: Dred_0473

Alternate gene names: 134298348

Gene position: 517042-516188 (Counterclockwise)

Preceding gene: 134298353

Following gene: 134298346

Centisome position: 14.33

GC content: 41.75

Gene sequence:

>855_bases
ATGGAACGGTCGAAGCGTGTGATGTGGCTTGTTTTACTATTAATCTTTGTACTAATAGCAGGGGGATGTGGCACTAGCTC
CGCCGAGAAAGATGCAAAGGGTACCATTACAATCGGACTAAACAACTGGCCAGAAAATATTGCTGTATCAAACATGTGGA
AAATATTATTGGAAGAAAAGGGCTATAAAGTTGAACTTTCTGCCATGGAGAAATCTCCGGTATGGGCAGGTATCGCCAAG
GGTGATTTAGATATTGCTCCAGAAGTGTGGCTCCCCCAAACCGACGAGCCTCTTTATAATGAATACAAGGATCAACTAGA
GTTACACGAGGCCTGGTATGAGGGAACAGCCCTTGGTCTAGTGGTCCCTGCCTATATGGACATCAATAGCATTGAGGACT
TAGACAAACTTGGTATAAACACCATTGTAGGGATTGACCCAGGTGCCAGCATGATGAAATTAACCAAAAAGCTTATTAAG
GAATACGGACTTAATTATGAGCTTATTGAAAGCTCTGAACCCGCTATGATGAGTGAGTTAACCAAAGCATATAAAGAGAA
AAAACCCGTGGTGGTTACTCTCTGGAGCCCCCACTGGGCCTTTTCTGAATTTGATTTAAAGTATCTGAAAGATCCGAAAA
AAATTTTTGGTGACCAGGAAAATATTTATTTTATGACTCGGAAAGAATTCGGTAAAGATTACCCGGAGGTACTGAAGTGG
ATGAATAAGTGGCATATGGACGACCAATCCCTAGGTCAGTTGATGGCTACCATCAATAAAACAAATAGTCCCGAAGAAGG
CGCCAAGCAATGGATTAAAGAAAACCGTAATCTCACCAACCAATGGTTTGAATAA

Upstream 100 bases:

>100_bases
TTAAAAAAATTGTAGAAAAAGAAAGCAATCATTCGAAAACATTGACAACTTTTATTTTTTTTTGATATGTTTGTAAAAAA
ATACTAGGAAGGGTGGTTTA

Downstream 100 bases:

>100_bases
AATATTAAATCTTATTAAAGAACGCCGGCAGATATAGCCGGCGTTCTTTTATTAAGCCTGTTGAGCCGCCTTCTTGGCCC
GGGCTCTTTCATTCTTTTCC

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MERSKRVMWLVLLLIFVLIAGGCGTSSAEKDAKGTITIGLNNWPENIAVSNMWKILLEEKGYKVELSAMEKSPVWAGIAK
GDLDIAPEVWLPQTDEPLYNEYKDQLELHEAWYEGTALGLVVPAYMDINSIEDLDKLGINTIVGIDPGASMMKLTKKLIK
EYGLNYELIESSEPAMMSELTKAYKEKKPVVVTLWSPHWAFSEFDLKYLKDPKKIFGDQENIYFMTRKEFGKDYPEVLKW
MNKWHMDDQSLGQLMATINKTNSPEEGAKQWIKENRNLTNQWFE

Sequences:

>Translated_284_residues
MERSKRVMWLVLLLIFVLIAGGCGTSSAEKDAKGTITIGLNNWPENIAVSNMWKILLEEKGYKVELSAMEKSPVWAGIAK
GDLDIAPEVWLPQTDEPLYNEYKDQLELHEAWYEGTALGLVVPAYMDINSIEDLDKLGINTIVGIDPGASMMKLTKKLIK
EYGLNYELIESSEPAMMSELTKAYKEKKPVVVTLWSPHWAFSEFDLKYLKDPKKIFGDQENIYFMTRKEFGKDYPEVLKW
MNKWHMDDQSLGQLMATINKTNSPEEGAKQWIKENRNLTNQWFE
>Mature_284_residues
MERSKRVMWLVLLLIFVLIAGGCGTSSAEKDAKGTITIGLNNWPENIAVSNMWKILLEEKGYKVELSAMEKSPVWAGIAK
GDLDIAPEVWLPQTDEPLYNEYKDQLELHEAWYEGTALGLVVPAYMDINSIEDLDKLGINTIVGIDPGASMMKLTKKLIK
EYGLNYELIESSEPAMMSELTKAYKEKKPVVVTLWSPHWAFSEFDLKYLKDPKKIFGDQENIYFMTRKEFGKDYPEVLKW
MNKWHMDDQSLGQLMATINKTNSPEEGAKQWIKENRNLTNQWFE

Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 32641; Mature: 32641

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERSKRVMWLVLLLIFVLIAGGCGTSSAEKDAKGTITIGLNNWPENIAVSNMWKILLEEK
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC
GYKVELSAMEKSPVWAGIAKGDLDIAPEVWLPQTDEPLYNEYKDQLELHEAWYEGTALGL
CCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE
VVPAYMDINSIEDLDKLGINTIVGIDPGASMMKLTKKLIKEYGLNYELIESSEPAMMSEL
EHHHHHCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH
TKAYKEKKPVVVTLWSPHWAFSEFDLKYLKDPKKIFGDQENIYFMTRKEFGKDYPEVLKW
HHHHHCCCCEEEEEECCCCCCHHCCHHHHCCHHHHHCCCCCEEEEECHHHCCCHHHHHHH
MNKWHMDDQSLGQLMATINKTNSPEEGAKQWIKENRNLTNQWFE
HHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MERSKRVMWLVLLLIFVLIAGGCGTSSAEKDAKGTITIGLNNWPENIAVSNMWKILLEEK
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC
GYKVELSAMEKSPVWAGIAKGDLDIAPEVWLPQTDEPLYNEYKDQLELHEAWYEGTALGL
CCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE
VVPAYMDINSIEDLDKLGINTIVGIDPGASMMKLTKKLIKEYGLNYELIESSEPAMMSEL
EHHHHHCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH
TKAYKEKKPVVVTLWSPHWAFSEFDLKYLKDPKKIFGDQENIYFMTRKEFGKDYPEVLKW
HHHHHCCCCEEEEEECCCCCCHHCCHHHHCCHHHHHCCCCCEEEEECHHHCCCHHHHHHH
MNKWHMDDQSLGQLMATINKTNSPEEGAKQWIKENRNLTNQWFE
HHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622480; 8969502; 9384377 [H]