| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134297897
Identifier: 134297897
GI number: 134297897
Start: 24816
End: 25547
Strand: Reverse
Name: 134297897
Synonym: Dred_0016
Alternate gene names: NA
Gene position: 25547-24816 (Counterclockwise)
Preceding gene: 134297899
Following gene: NA
Centisome position: 0.71
GC content: 31.28
Gene sequence:
>732_bases ATGGACAATGAGCATAATCGTTTTGAATGTGGCTTAAAATATATTGTACTGGTGAATATACTGATCTTTTTATTCTTCTT TTTTGTACAGATTGTTCATGTACCTATTTATCATATAACCGATCAACAGGAGTATATCCTACATTTTGCTGAGAAGGTAA ATAGTTCTATGGTTATATTATTTCTTTCAGTGGTAGTTTTCTCCACTATTGTAATTGCTATTGTTTTTCGATCAAATATA AAGCTAAATATAAAAAAAGATCAATTACTAGTTGATGTTGGTATACAAGAAAAGGACTTTTCTCAAGGTATTGACGGAAT TAAAAAGGTTGTCGATGAACATGGTAATATCCCCTTGTATAATTCAGAGGTATATCGGCAATTAACAAAGGATTATATTA TATCCGAAGTAAATAAGGAAGGTAAACCTGAACGTTTTATTACCATGGAATCATATCTAAGTGGTTTTATGCAGTTATGT GAATCAGCCAATTGTCATAACCATAATATTACTCCCCAAAATTTAAAGATTGACAAGGTTTATGCACCAACTGAGTATGT TCAAGTGGGTGACCAACTTTTAACAATCATCAAGAAAATGAATAAAAACAAACTCTCGGCTTTGCCGGTGGTAAATAAAG ATGGTGTAATGATTGGTTCCATCAATTATCTTCAAGTACTAAAATTAGTAACAGATGCCGCAAAACAACAAAAAACCGCT AGTATTAACTAA
Upstream 100 bases:
>100_bases TTGTCCTTGTCGCAAAAATTATTATATACCAAGTAGTAGGCTAAAAGCAACTGTAATTAATTGGTTTATGAAAAATTTAT TTGTATAAGGGGAATTTATT
Downstream 100 bases:
>100_bases CGGTTTTTTTATATTGGCGGAGAGCGAGGGATTCGAACCCTCGATACAGGTTAACCCCGTATACTCGCTTAGCAGGCGAG CGCCTTCAGCCAACTCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MDNEHNRFECGLKYIVLVNILIFLFFFFVQIVHVPIYHITDQQEYILHFAEKVNSSMVILFLSVVVFSTIVIAIVFRSNI KLNIKKDQLLVDVGIQEKDFSQGIDGIKKVVDEHGNIPLYNSEVYRQLTKDYIISEVNKEGKPERFITMESYLSGFMQLC ESANCHNHNITPQNLKIDKVYAPTEYVQVGDQLLTIIKKMNKNKLSALPVVNKDGVMIGSINYLQVLKLVTDAAKQQKTA SIN
Sequences:
>Translated_243_residues MDNEHNRFECGLKYIVLVNILIFLFFFFVQIVHVPIYHITDQQEYILHFAEKVNSSMVILFLSVVVFSTIVIAIVFRSNI KLNIKKDQLLVDVGIQEKDFSQGIDGIKKVVDEHGNIPLYNSEVYRQLTKDYIISEVNKEGKPERFITMESYLSGFMQLC ESANCHNHNITPQNLKIDKVYAPTEYVQVGDQLLTIIKKMNKNKLSALPVVNKDGVMIGSINYLQVLKLVTDAAKQQKTA SIN >Mature_243_residues MDNEHNRFECGLKYIVLVNILIFLFFFFVQIVHVPIYHITDQQEYILHFAEKVNSSMVILFLSVVVFSTIVIAIVFRSNI KLNIKKDQLLVDVGIQEKDFSQGIDGIKKVVDEHGNIPLYNSEVYRQLTKDYIISEVNKEGKPERFITMESYLSGFMQLC ESANCHNHNITPQNLKIDKVYAPTEYVQVGDQLLTIIKKMNKNKLSALPVVNKDGVMIGSINYLQVLKLVTDAAKQQKTA SIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27817; Mature: 27817
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNEHNRFECGLKYIVLVNILIFLFFFFVQIVHVPIYHITDQQEYILHFAEKVNSSMVIL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHCCHHHHH FLSVVVFSTIVIAIVFRSNIKLNIKKDQLLVDVGIQEKDFSQGIDGIKKVVDEHGNIPLY HHHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCC NSEVYRQLTKDYIISEVNKEGKPERFITMESYLSGFMQLCESANCHNHNITPQNLKIDKV CHHHHHHHHHHHHHHHHCCCCCCHHEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE YAPTEYVQVGDQLLTIIKKMNKNKLSALPVVNKDGVMIGSINYLQVLKLVTDAAKQQKTA ECCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEECHHHHHHHHHHHHHHHHHHHC SIN CCC >Mature Secondary Structure MDNEHNRFECGLKYIVLVNILIFLFFFFVQIVHVPIYHITDQQEYILHFAEKVNSSMVIL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHCCHHHHH FLSVVVFSTIVIAIVFRSNIKLNIKKDQLLVDVGIQEKDFSQGIDGIKKVVDEHGNIPLY HHHHHHHHHHHHHHHHHCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCC NSEVYRQLTKDYIISEVNKEGKPERFITMESYLSGFMQLCESANCHNHNITPQNLKIDKV CHHHHHHHHHHHHHHHHCCCCCCHHEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE YAPTEYVQVGDQLLTIIKKMNKNKLSALPVVNKDGVMIGSINYLQVLKLVTDAAKQQKTA ECCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEECHHHHHHHHHHHHHHHHHHHC SIN CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA