| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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The map label for this gene is pyrG
Identifier: 13357844
GI number: 13357844
Start: 320035
End: 321663
Strand: Direct
Name: pyrG
Synonym: UU284
Alternate gene names: 13357844
Gene position: 320035-321663 (Clockwise)
Preceding gene: 13357843
Following gene: 13357845
Centisome position: 42.57
GC content: 25.84
Gene sequence:
>1629_bases ATGGAGATTGATCTAATGAAACATATACAAAAAACAAAATTTATTTTTGTAACTGGTGGTGTTTATTCATCATTAGGTAA AGGGGTTAGTGCTAGTAGTATTGGTCGAATTCTTGTTGAATTAGGATATAGTGTTGCAATGCAAAAGCTTGATCCATATT TAAATATTGATCCCACTTATTTATCACCATTACAACATGGAGAAGTATTTGTTACAAAAGACGGTAAAGAAGCAGATTTA GATTTAGGTACTTATGAACGTTTTATTAATGCTGATTTAAATAAATATGCGTCAGTAACTTCAGGAAAAATTTATTATGA AATTTTAACAAAAGAGCGTGAAAATGGTTTTGACGGTAAAACTGTTCAAACTATTCCACATGTCACATCTGCAGTTATTG ATTACATTAAAAAAATTAAAGATAGTTTAAAAACTGATTTTATTATTGTTGAAATTGGAGGAACAATTGGAGATATTGAA TCGCTTCCATTTATTGAAGCTATTAGTCAATTTAAAACAATTTATGGTGTAAATAATGTAATGTTTATTCACTGTTCACC GCTTATTTATATTGAAAAAGTAGGTGAATTAAAAACAAAACCAACTCAACATAGCGTTAAGACGTTACGTTCATTAGGAA TTAATTTAGATTTATTGTTATTAAGAACTAATCAAAAATTAGATGAAGTAACGATTAAAAAATTAGCATGATCTTGTGGA TTAGATATTGATATGATTTTTGCTGCTTATGATGTTGAGTCAGTTTATTTATTACCAAATGTTTTGTTTGAGCAAGGGAT TCATAAAACTATTTTAGATTTTTTTAGTCTACCTTTAAAAAATGATAATATTAATTCATGAATAGATTTTACTGATAAAA TTACAACCTTTAAAAAACATAATTTAGTTATAGGTTTAGTTGGAAAATATGTTGAATTACCCGATGCTTATAAATCAGTA TTAGCGAGTTTAGAATTAGCAGCAATTGAATTAAATATTGATTTAAAGATTAAATATATTCAACCCCAAAATTTAAATGA AAACAACATAAATGAAGAACTAAAAAAAATAAATGGTATTGTTATTCCAAGTATTGCAGGTTCAATAAAAGGCTGACCAG GAGCTTTATTAGCTGCATCTTATGCAAGAAAAAACAATATTCCATTTTTAGCTGTGGGAACTGGCGTTAATATTGGTATT GGTGAATTCATTAATAATGTACTAAAACTTCCAATTGAATTTATTAATTTAGGCAATGGTGATTTTAGTTTTTTAAAAGA CGCTTTCGTTAAAAATGAAATTGAAAATTATCGAATTGGAGAGTATTGTTCTAATATTCAAGCTAACACTATAACAAGCC AAATTTATCTCAAACAAAATCAATTGAACGAGCGCCATCGTCATCATTTTGAATTTAACAATCATTATATTAATAATTAT TTTTTAAATCAAAATTGAAAAATTGGAGCAATTTCAGTGGATAATAATTATATTGATGTTTTAGAATACACAAAAAATCA TTTTTATGTTTTAACAATTTTTAATCCAGAATATACATCAAAACCTTCAAAGGCAAATCCTTATTTTATTAATTTATTAA AGATGAGTTTAAAAATAAAAGAAAGTTAG
Upstream 100 bases:
>100_bases CTGCACGCACTCATGATACTTTTTTAAAAATTTATGTAAAAAACTTAGATCACTTACAAAAGATTATTTTAGAACTTCAA GCTAAAAATGTTATTAATGA
Downstream 100 bases:
>100_bases AATATGATTAATTACAGTAAACCACGAGGTACTATAGATTTATATAATAAAGAAATGAATGATTTTAAATTACTTGAAAA TTTTTTATTATCAACTACTA
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 542; Mature: 542
Protein sequence:
>542_residues MEIDLMKHIQKTKFIFVTGGVYSSLGKGVSASSIGRILVELGYSVAMQKLDPYLNIDPTYLSPLQHGEVFVTKDGKEADL DLGTYERFINADLNKYASVTSGKIYYEILTKERENGFDGKTVQTIPHVTSAVIDYIKKIKDSLKTDFIIVEIGGTIGDIE SLPFIEAISQFKTIYGVNNVMFIHCSPLIYIEKVGELKTKPTQHSVKTLRSLGINLDLLLLRTNQKLDEVTIKKLAWSCG LDIDMIFAAYDVESVYLLPNVLFEQGIHKTILDFFSLPLKNDNINSWIDFTDKITTFKKHNLVIGLVGKYVELPDAYKSV LASLELAAIELNIDLKIKYIQPQNLNENNINEELKKINGIVIPSIAGSIKGWPGALLAASYARKNNIPFLAVGTGVNIGI GEFINNVLKLPIEFINLGNGDFSFLKDAFVKNEIENYRIGEYCSNIQANTITSQIYLKQNQLNERHRHHFEFNNHYINNY FLNQNWKIGAISVDNNYIDVLEYTKNHFYVLTIFNPEYTSKPSKANPYFINLLKMSLKIKES
Sequences:
>Translated_542_residues MEIDLMKHIQKTKFIFVTGGVYSSLGKGVSASSIGRILVELGYSVAMQKLDPYLNIDPTYLSPLQHGEVFVTKDGKEADL DLGTYERFINADLNKYASVTSGKIYYEILTKERENGFDGKTVQTIPHVTSAVIDYIKKIKDSLKTDFIIVEIGGTIGDIE SLPFIEAISQFKTIYGVNNVMFIHCSPLIYIEKVGELKTKPTQHSVKTLRSLGINLDLLLLRTNQKLDEVTIKKLA*SCG LDIDMIFAAYDVESVYLLPNVLFEQGIHKTILDFFSLPLKNDNINS*IDFTDKITTFKKHNLVIGLVGKYVELPDAYKSV LASLELAAIELNIDLKIKYIQPQNLNENNINEELKKINGIVIPSIAGSIKG*PGALLAASYARKNNIPFLAVGTGVNIGI GEFINNVLKLPIEFINLGNGDFSFLKDAFVKNEIENYRIGEYCSNIQANTITSQIYLKQNQLNERHRHHFEFNNHYINNY FLNQN*KIGAISVDNNYIDVLEYTKNHFYVLTIFNPEYTSKPSKANPYFINLLKMSLKIKES >Mature_542_residues MEIDLMKHIQKTKFIFVTGGVYSSLGKGVSASSIGRILVELGYSVAMQKLDPYLNIDPTYLSPLQHGEVFVTKDGKEADL DLGTYERFINADLNKYASVTSGKIYYEILTKERENGFDGKTVQTIPHVTSAVIDYIKKIKDSLKTDFIIVEIGGTIGDIE SLPFIEAISQFKTIYGVNNVMFIHCSPLIYIEKVGELKTKPTQHSVKTLRSLGINLDLLLLRTNQKLDEVTIKKLA*SCG LDIDMIFAAYDVESVYLLPNVLFEQGIHKTILDFFSLPLKNDNINS*IDFTDKITTFKKHNLVIGLVGKYVELPDAYKSV LASLELAAIELNIDLKIKYIQPQNLNENNINEELKKINGIVIPSIAGSIKG*PGALLAASYARKNNIPFLAVGTGVNIGI GEFINNVLKLPIEFINLGNGDFSFLKDAFVKNEIENYRIGEYCSNIQANTITSQIYLKQNQLNERHRHHFEFNNHYINNY FLNQN*KIGAISVDNNYIDVLEYTKNHFYVLTIFNPEYTSKPSKANPYFINLLKMSLKIKES
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=552, Percent_Identity=34.2391304347826, Blast_Score=318, Evalue=9e-87, Organism=Homo sapiens, GI28559085, Length=551, Percent_Identity=36.1161524500907, Blast_Score=317, Evalue=2e-86, Organism=Homo sapiens, GI28559083, Length=551, Percent_Identity=36.1161524500907, Blast_Score=317, Evalue=2e-86, Organism=Homo sapiens, GI221316689, Length=551, Percent_Identity=36.1161524500907, Blast_Score=317, Evalue=2e-86, Organism=Escherichia coli, GI1789142, Length=542, Percent_Identity=36.1623616236162, Blast_Score=336, Evalue=2e-93, Organism=Caenorhabditis elegans, GI25148299, Length=526, Percent_Identity=33.8403041825095, Blast_Score=291, Evalue=5e-79, Organism=Saccharomyces cerevisiae, GI6319432, Length=573, Percent_Identity=35.9511343804538, Blast_Score=322, Evalue=1e-88, Organism=Saccharomyces cerevisiae, GI6322563, Length=569, Percent_Identity=34.9736379613357, Blast_Score=313, Evalue=6e-86, Organism=Drosophila melanogaster, GI24664469, Length=551, Percent_Identity=32.8493647912886, Blast_Score=305, Evalue=4e-83, Organism=Drosophila melanogaster, GI21357815, Length=496, Percent_Identity=30.4435483870968, Blast_Score=248, Evalue=6e-66,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 60531; Mature: 60531
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIDLMKHIQKTKFIFVTGGVYSSLGKGVSASSIGRILVELGYSVAMQKLDPYLNIDPTY CCCHHHHHHHHCEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH LSPLQHGEVFVTKDGKEADLDLGTYERFINADLNKYASVTSGKIYYEILTKERENGFDGK CCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHCCCCCEEEEEEEECCCCCCCCCC TVQTIPHVTSAVIDYIKKIKDSLKTDFIIVEIGGTIGDIESLPFIEAISQFKTIYGVNNV EEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCE MFIHCSPLIYIEKVGELKTKPTQHSVKTLRSLGINLDLLLLRTNQKLDEVTIKKLASCGL EEEEECCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCC DIDMIFAAYDVESVYLLPNVLFEQGIHKTILDFFSLPLKNDNINSIDFTDKITTFKKHNL CCEEEEEEECCCEEEEHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEECCCE VIGLVGKYVELPDAYKSVLASLELAAIELNIDLKIKYIQPQNLNENNINEELKKINGIVI EEEECCCHHCCCHHHHHHHHHHEEEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHCCEEE PSIAGSIKGPGALLAASYARKNNIPFLAVGTGVNIGIGEFINNVLKLPIEFINLGNGDFS ECCCCCCCCCCHHHEEHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCHHEEECCCCCHH FLKDAFVKNEIENYRIGEYCSNIQANTITSQIYLKQNQLNERHRHHFEFNNHYINNYFLN HHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHCCCCCCEEEEEEEEC QNKIGAISVDNNYIDVLEYTKNHFYVLTIFNPEYTSKPSKANPYFINLLKMSLKIKES CCCEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECC >Mature Secondary Structure MEIDLMKHIQKTKFIFVTGGVYSSLGKGVSASSIGRILVELGYSVAMQKLDPYLNIDPTY CCCHHHHHHHHCEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH LSPLQHGEVFVTKDGKEADLDLGTYERFINADLNKYASVTSGKIYYEILTKERENGFDGK CCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHCCCCCEEEEEEEECCCCCCCCCC TVQTIPHVTSAVIDYIKKIKDSLKTDFIIVEIGGTIGDIESLPFIEAISQFKTIYGVNNV EEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCE MFIHCSPLIYIEKVGELKTKPTQHSVKTLRSLGINLDLLLLRTNQKLDEVTIKKLASCGL EEEEECCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCC DIDMIFAAYDVESVYLLPNVLFEQGIHKTILDFFSLPLKNDNINSIDFTDKITTFKKHNL CCEEEEEEECCCEEEEHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEECCCE VIGLVGKYVELPDAYKSVLASLELAAIELNIDLKIKYIQPQNLNENNINEELKKINGIVI EEEECCCHHCCCHHHHHHHHHHEEEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHCCEEE PSIAGSIKGPGALLAASYARKNNIPFLAVGTGVNIGIGEFINNVLKLPIEFINLGNGDFS ECCCCCCCCCCHHHEEHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCHHEEECCCCCHH FLKDAFVKNEIENYRIGEYCSNIQANTITSQIYLKQNQLNERHRHHFEFNNHYINNYFLN HHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHCCCCCCEEEEEEEEC QNKIGAISVDNNYIDVLEYTKNHFYVLTIFNPEYTSKPSKANPYFINLLKMSLKIKES CCCEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]