Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 13357767

GI number: 13357767

Start: 253523

End: 254161

Strand: Reverse

Name: Not Available

Synonym: UU209

Alternate gene names: NA

Gene position: 254161-253523 (Counterclockwise)

Preceding gene: 13357769

Following gene: 13357766

Centisome position: 33.81

GC content: 18.15

Gene sequence:

>639_bases
ATGAATATCAACTGAAAAAGTATGTATAAAGAGATTTTAATAAGAAATAGTGATTTAAATTATATTGTTAGTGATCCTTT
TGAAAACATGATTGGAGGTTTTCCTATTATTTTATTTGAAAATGATAATTATATATATTATTTATCTGGTCAAAATGCTT
ATTTACCTTCAAAAATGCGTCGTTGAAAAAACTGAGATGAAATTTTGATCAATAAAAATGACTTATTAAAAGAAAATTTT
ATTTATAAGGATATTTATATTAATTTATTTCAAATCTATGTTACTAAAAAAAATAATTTAAGCAGATATTTAAGTAACCA
GTTTAATTTTACGTTAACAAAAAACGATTTTAAAGACGAATTGTGAAATAAATTAATATATAATACAATAAAAAAATTGA
TTAATAATTCCAATCCACAAATTTTACTATTTGAAATTTCAAGAAATAAAAAGCAAAAATATCATAGTTTATTACTTTTT
GCTGATAAAAATGTATTGAAAAAATTTTATTTAAATTCTGCAACAAAAGATAATTATGAAGATATTATTGATTTGGCCTT
TAATAAATTTGAAAATTTACAAAATTTATTAAAAACAACAAAAGTTAAAAACCATTTAAAAAATTTGAAAAAGTATTAA

Upstream 100 bases:

>100_bases
CATCTTTTTAAACACCTCCACGTGTTAAAATTATTTAAATATTTTAATTTCACTAATTTTAATATTATAAAATATTTATA
GTAATATAATAAATTTTTTT

Downstream 100 bases:

>100_bases
GATTGTATTTATCTTATTTGTCTAAAAACATAAATAATAATTTTATAATATAATATAATTTTGAAACTATAAATATGAGA
GCGTAAATGTGGTGGGAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MNINWKSMYKEILIRNSDLNYIVSDPFENMIGGFPIILFENDNYIYYLSGQNAYLPSKMRRWKNWDEILINKNDLLKENF
IYKDIYINLFQIYVTKKNNLSRYLSNQFNFTLTKNDFKDELWNKLIYNTIKKLINNSNPQILLFEISRNKKQKYHSLLLF
ADKNVLKKFYLNSATKDNYEDIIDLAFNKFENLQNLLKTTKVKNHLKNLKKY

Sequences:

>Translated_212_residues
MNIN*KSMYKEILIRNSDLNYIVSDPFENMIGGFPIILFENDNYIYYLSGQNAYLPSKMRR*KN*DEILINKNDLLKENF
IYKDIYINLFQIYVTKKNNLSRYLSNQFNFTLTKNDFKDEL*NKLIYNTIKKLINNSNPQILLFEISRNKKQKYHSLLLF
ADKNVLKKFYLNSATKDNYEDIIDLAFNKFENLQNLLKTTKVKNHLKNLKKY
>Mature_212_residues
MNIN*KSMYKEILIRNSDLNYIVSDPFENMIGGFPIILFENDNYIYYLSGQNAYLPSKMRR*KN*DEILINKNDLLKENF
IYKDIYINLFQIYVTKKNNLSRYLSNQFNFTLTKNDFKDEL*NKLIYNTIKKLINNSNPQILLFEISRNKKQKYHSLLLF
ADKNVLKKFYLNSATKDNYEDIIDLAFNKFENLQNLLKTTKVKNHLKNLKKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24890; Mature: 24890

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINKSMYKEILIRNSDLNYIVSDPFENMIGGFPIILFENDNYIYYLSGQNAYLPSKMRR
CCCCHHHHHHHHHCCCCCCEEECCCHHHHHCCCEEEEEECCCEEEEECCCCCCCCHHHHC
KNDEILINKNDLLKENFIYKDIYINLFQIYVTKKNNLSRYLSNQFNFTLTKNDFKDELNK
CCCCEEECCCHHHHHHCCHHHHHEEEEEEEEECCCCHHHHHCCCCEEEEECCHHHHHHHH
LIYNTIKKLINNSNPQILLFEISRNKKQKYHSLLLFADKNVLKKFYLNSATKDNYEDIID
HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHEEEEECHHHHHHHHHCCCCCCCHHHHHH
LAFNKFENLQNLLKTTKVKNHLKNLKKY
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNINKSMYKEILIRNSDLNYIVSDPFENMIGGFPIILFENDNYIYYLSGQNAYLPSKMRR
CCCCHHHHHHHHHCCCCCCEEECCCHHHHHCCCEEEEEECCCEEEEECCCCCCCCHHHHC
KNDEILINKNDLLKENFIYKDIYINLFQIYVTKKNNLSRYLSNQFNFTLTKNDFKDELNK
CCCCEEECCCHHHHHHCCHHHHHEEEEEEEEECCCCHHHHHCCCCEEEEECCHHHHHHHH
LIYNTIKKLINNSNPQILLFEISRNKKQKYHSLLLFADKNVLKKFYLNSATKDNYEDIID
HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHEEEEECHHHHHHHHHCCCCCCCHHHHHH
LAFNKFENLQNLLKTTKVKNHLKNLKKY
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA