| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is lacX [H]
Identifier: 126701063
GI number: 126701063
Start: 4031482
End: 4032354
Strand: Direct
Name: lacX [H]
Synonym: CD3440
Alternate gene names: 126701063
Gene position: 4031482-4032354 (Clockwise)
Preceding gene: 126701030
Following gene: 126701073
Centisome position: 93.97
GC content: 26.35
Gene sequence:
>873_bases ATGAATATATTACAAAATGAAAATTTAATTATCGAATCAAGCAGTTTTGGTGCTGAACTAACTAAAATATTTTCTAAAAA ATACGACAAAAACATTCTTTGGGATGGTAATAAAAAATATTGGGGTAGACAATCACCTATATTGTTCCCTATAGTAGGTA AACTTTTTGATAATGAAACAATAATAGAAGAAAATTTATATAGCATGACTCAACATGGGTTTGCTAGAGATATGGACTTT GAGATTGTAGATAAAGGAGATACATTTGTAACTTATAAATTAACAGATAATGAATCTACTTTAAAGAAGTATCCATATTC TTTTGAGCTAATCATAAACTATACATTAAATGATAATAGTATTGAGGTAGAATGGATTGTAAAAAATACTGATTCTAAAG ATATATTCTTTTCTATAGGTGGACATCCTGCATTCAACCTTCCTTTTTACAAACAAAATGATTTTTCTAAACACTACCTT GAGTTTAAAAGTAAAAATGATGTAGAAAAAATCAATTTAAATGGTTCTTTTACAGATGATATAATACCTATTGGAAAATT AAAAAACTTACAGTTAAATCCAGAAGTATTCAAGAATGATGCTTTGATATACACCAACATAGATGAAGTGTCTATATGTA ATAATGATGGTAGTAAATATGTAACTATATCTATGGAAGATTTCCCTCTAGTTGGTATTTGGACTCCTTATTATAGTGAA ACTAATTCTACTGCTCCTTTTTTATGTATAGAACCTTGGTATGGTCTTGCTGATAGTATAAATTCTAACAAAATTTATAA AGATAAGAAGTTTATTAATAAACTTAGTAAAGGAAAAGTTTTTACTGCTTCTTACAATATAAATATACACTAG
Upstream 100 bases:
>100_bases TACTAAAATCTACCTTTCAAATATAATATCAAATAAAATTTAATAATCTTTATACTTTATAGTATAATATACTCATAAAA TATAATAAAGGAGATTTTAA
Downstream 100 bases:
>100_bases ATAAAGGTTAGCTAACCCGTTCCCAAAATAATAAAATATTTTTATATAAGTTAATATAAGGGTATGAAATAATATTATTT AATATTCCTCAATAATATTC
Product: aldose epimerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MNILQNENLIIESSSFGAELTKIFSKKYDKNILWDGNKKYWGRQSPILFPIVGKLFDNETIIEENLYSMTQHGFARDMDF EIVDKGDTFVTYKLTDNESTLKKYPYSFELIINYTLNDNSIEVEWIVKNTDSKDIFFSIGGHPAFNLPFYKQNDFSKHYL EFKSKNDVEKINLNGSFTDDIIPIGKLKNLQLNPEVFKNDALIYTNIDEVSICNNDGSKYVTISMEDFPLVGIWTPYYSE TNSTAPFLCIEPWYGLADSINSNKIYKDKKFINKLSKGKVFTASYNINIH
Sequences:
>Translated_290_residues MNILQNENLIIESSSFGAELTKIFSKKYDKNILWDGNKKYWGRQSPILFPIVGKLFDNETIIEENLYSMTQHGFARDMDF EIVDKGDTFVTYKLTDNESTLKKYPYSFELIINYTLNDNSIEVEWIVKNTDSKDIFFSIGGHPAFNLPFYKQNDFSKHYL EFKSKNDVEKINLNGSFTDDIIPIGKLKNLQLNPEVFKNDALIYTNIDEVSICNNDGSKYVTISMEDFPLVGIWTPYYSE TNSTAPFLCIEPWYGLADSINSNKIYKDKKFINKLSKGKVFTASYNINIH >Mature_290_residues MNILQNENLIIESSSFGAELTKIFSKKYDKNILWDGNKKYWGRQSPILFPIVGKLFDNETIIEENLYSMTQHGFARDMDF EIVDKGDTFVTYKLTDNESTLKKYPYSFELIINYTLNDNSIEVEWIVKNTDSKDIFFSIGGHPAFNLPFYKQNDFSKHYL EFKSKNDVEKINLNGSFTDDIIPIGKLKNLQLNPEVFKNDALIYTNIDEVSICNNDGSKYVTISMEDFPLVGIWTPYYSE TNSTAPFLCIEPWYGLADSINSNKIYKDKKFINKLSKGKVFTASYNINIH
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: NA
Molecular weight: Translated: 33576; Mature: 33576
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILQNENLIIESSSFGAELTKIFSKKYDKNILWDGNKKYWGRQSPILFPIVGKLFDNET CCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEHHHHCCCCE IIEENLYSMTQHGFARDMDFEIVDKGDTFVTYKLTDNESTLKKYPYSFELIINYTLNDNS EEHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEEECCCCHHHHCCEEEEEEEEEEECCCC IEVEWIVKNTDSKDIFFSIGGHPAFNLPFYKQNDFSKHYLEFKSKNDVEKINLNGSFTDD EEEEEEEECCCCCEEEEEECCCCEECCCCCCCCCCCHHHEEECCCCCCEEEEECCCCCCC IIPIGKLKNLQLNPEVFKNDALIYTNIDEVSICNNDGSKYVTISMEDFPLVGIWTPYYSE EEECCCCCCEEECHHHHCCCEEEEECCCEEEEECCCCCEEEEEEECCCCEEEEECCCCCC TNSTAPFLCIEPWYGLADSINSNKIYKDKKFINKLSKGKVFTASYNINIH CCCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHHHHCCEEEEEEEEEEEC >Mature Secondary Structure MNILQNENLIIESSSFGAELTKIFSKKYDKNILWDGNKKYWGRQSPILFPIVGKLFDNET CCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEHHHHCCCCE IIEENLYSMTQHGFARDMDFEIVDKGDTFVTYKLTDNESTLKKYPYSFELIINYTLNDNS EEHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEEECCCCHHHHCCEEEEEEEEEEECCCC IEVEWIVKNTDSKDIFFSIGGHPAFNLPFYKQNDFSKHYLEFKSKNDVEKINLNGSFTDD EEEEEEEECCCCCEEEEEECCCCEECCCCCCCCCCCHHHEEECCCCCCEEEEECCCCCCC IIPIGKLKNLQLNPEVFKNDALIYTNIDEVSICNNDGSKYVTISMEDFPLVGIWTPYYSE EEECCCCCCEEECHHHHCCCEEEEECCCEEEEECCCCCEEEEEEECCCCEEEEECCCCCC TNSTAPFLCIEPWYGLADSINSNKIYKDKKFINKLSKGKVFTASYNINIH CCCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHHHHCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339371 [H]