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The map label for this gene is yfmM [H]

Identifier: 126700979

GI number: 126700979

Start: 3922361

End: 3923899

Strand: Direct

Name: yfmM [H]

Synonym: CD3359

Alternate gene names: 126700979

Gene position: 3922361-3923899 (Clockwise)

Preceding gene: 126700976

Following gene: 126700985

Centisome position: 91.42

GC content: 29.17

Gene sequence:

>1539_bases
ATGAGTTTATTAAAAGTAACTAATTTATCACAATGTTTTATGGATAAATCACTGTATGAGAAAGCTAACTTTGATTTATT
CAAAGGTGAACATATAGGTGTAGTTGGCCAAAATGGTACAGGTAAAAGTACATTAATTAAAATTTTATTGGGAGAAGTTG
TTCCAGATTCAGGAGAAATCAAGTGGCAACCTAATATCAATATAGGCCATTTAGACCAATATGCAGAAATCAATAGAGAT
ACAACAATATCACTCTATTTACACACTGCATTTGAGGAACTTTATAAAATAGAAAAGGAAATGAATTTACTCTATCAAAA
AAGTGCTATATCTGAAAATGAGCAATATCTAATCAAAGCATCAGATTATCAGGAACAACTAATAGCAAATAATTTCTATT
CTATAGATAATGAAATAAATAAAATAGCAAATGGTCTTGGATTAGATTCAATAGGAATGAATCGTGTTGTTAGAGAGCTT
AGTGGTGGTCAAAGGGCAAAGGTAATTTTAGCAAAATTACTACTTTCTAACCATGATGTTCTATTATTAGACGAACCAAC
AAACTTTTTAGATAAAGAACATGTTGAATGGCTCTCAAATTATTTAAATACATTTAATGGGGCATTTATTGTAGTTTCCC
ACGATTTTGATTTTTTAGAAAAAATTTCTACAGGTATTCTTGATATAGAATTTGGCATGATTAAGAAATATCATGGAAAA
TATTCAGAGTTCCTTAAACAAAAATCACGTTTAAGAGAAGATTATATTAGAAGGTATCAAGCACAACAAAAGAAAATAGA
AAAAGAAGAAACATTTATACGTAAAAATAAAGCTGGAGTAAATTCAAAAATTGCAAGAGGAAGACAAAAACAATTGGATA
AAATAGAAAGAATAGCTCCTCCTAGTTTTACAGGAAAACCAAATATTCAATTTTCAGAAATTGAAATATCGGCTCAAAAT
GCTCTTACTATAACAAATCTTGAAGTTGGATACTACTATTCTTTACTTCCAAAATTAAATTTTTCTGTTGATGGAGGTCA
AAAAATAGTTATAACTGGTTTTAATGGAATCGGTAAATCTACCTTGTTAAAGACATTAGTAAAAGATATTCCTCGTATAT
CTGGAGATTTCCAGTTTTCAGAACAAGTTAAAATTGGTTATTATGAGCAAGATTTAAAATGGGAAAATCCTGATAAAACC
CCACTTCAAATAGTAGCAGATAAATATCCAAAATTAAATACAAAAGAGATTAGACGTCATCTAGCCAGATGTGGTGTGAA
GGAAGAGCATGTTTCAAGGAGTGTATCTACTTTAAGTGGTGGTGAACAATCTAAGGTTAAATTATGTTGTATGATGTTAT
CTCCTTGTAATTTTCTTATTCTGGATGAACCAACCAATCACTTTGATGCAGAGACAAAGGATGCTTTACAAAATGCTTTG
AAACAGTTTAGAGGAAGTATAATCCTAGTTTCCCATGAAGAAAAATTTTATAAAGGTTGGATTGATAAAGTATTTAATAT
AGAAAAACAATTAGTATAA

Upstream 100 bases:

>100_bases
CTTTTGTTTTTCCAAAAGCAGAGGTCGGCATTTTACAATGCCATTCCTCTGCTTTTTTTATTTCCATAAATTTTTTAATA
AAAGAAAAGGAGTTTGAATT

Downstream 100 bases:

>100_bases
GTTTATACACAATATACAATATTATTTAATTGGTATTTCAATGCAAATTTTAATGTTCTAGTTAATGTTTCACTGCAAAT
AAACTAAAAAAATTTTATTA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MSLLKVTNLSQCFMDKSLYEKANFDLFKGEHIGVVGQNGTGKSTLIKILLGEVVPDSGEIKWQPNINIGHLDQYAEINRD
TTISLYLHTAFEELYKIEKEMNLLYQKSAISENEQYLIKASDYQEQLIANNFYSIDNEINKIANGLGLDSIGMNRVVREL
SGGQRAKVILAKLLLSNHDVLLLDEPTNFLDKEHVEWLSNYLNTFNGAFIVVSHDFDFLEKISTGILDIEFGMIKKYHGK
YSEFLKQKSRLREDYIRRYQAQQKKIEKEETFIRKNKAGVNSKIARGRQKQLDKIERIAPPSFTGKPNIQFSEIEISAQN
ALTITNLEVGYYYSLLPKLNFSVDGGQKIVITGFNGIGKSTLLKTLVKDIPRISGDFQFSEQVKIGYYEQDLKWENPDKT
PLQIVADKYPKLNTKEIRRHLARCGVKEEHVSRSVSTLSGGEQSKVKLCCMMLSPCNFLILDEPTNHFDAETKDALQNAL
KQFRGSIILVSHEEKFYKGWIDKVFNIEKQLV

Sequences:

>Translated_512_residues
MSLLKVTNLSQCFMDKSLYEKANFDLFKGEHIGVVGQNGTGKSTLIKILLGEVVPDSGEIKWQPNINIGHLDQYAEINRD
TTISLYLHTAFEELYKIEKEMNLLYQKSAISENEQYLIKASDYQEQLIANNFYSIDNEINKIANGLGLDSIGMNRVVREL
SGGQRAKVILAKLLLSNHDVLLLDEPTNFLDKEHVEWLSNYLNTFNGAFIVVSHDFDFLEKISTGILDIEFGMIKKYHGK
YSEFLKQKSRLREDYIRRYQAQQKKIEKEETFIRKNKAGVNSKIARGRQKQLDKIERIAPPSFTGKPNIQFSEIEISAQN
ALTITNLEVGYYYSLLPKLNFSVDGGQKIVITGFNGIGKSTLLKTLVKDIPRISGDFQFSEQVKIGYYEQDLKWENPDKT
PLQIVADKYPKLNTKEIRRHLARCGVKEEHVSRSVSTLSGGEQSKVKLCCMMLSPCNFLILDEPTNHFDAETKDALQNAL
KQFRGSIILVSHEEKFYKGWIDKVFNIEKQLV
>Mature_511_residues
SLLKVTNLSQCFMDKSLYEKANFDLFKGEHIGVVGQNGTGKSTLIKILLGEVVPDSGEIKWQPNINIGHLDQYAEINRDT
TISLYLHTAFEELYKIEKEMNLLYQKSAISENEQYLIKASDYQEQLIANNFYSIDNEINKIANGLGLDSIGMNRVVRELS
GGQRAKVILAKLLLSNHDVLLLDEPTNFLDKEHVEWLSNYLNTFNGAFIVVSHDFDFLEKISTGILDIEFGMIKKYHGKY
SEFLKQKSRLREDYIRRYQAQQKKIEKEETFIRKNKAGVNSKIARGRQKQLDKIERIAPPSFTGKPNIQFSEIEISAQNA
LTITNLEVGYYYSLLPKLNFSVDGGQKIVITGFNGIGKSTLLKTLVKDIPRISGDFQFSEQVKIGYYEQDLKWENPDKTP
LQIVADKYPKLNTKEIRRHLARCGVKEEHVSRSVSTLSGGEQSKVKLCCMMLSPCNFLILDEPTNHFDAETKDALQNALK
QFRGSIILVSHEEKFYKGWIDKVFNIEKQLV

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=508, Percent_Identity=32.0866141732283, Blast_Score=241, Evalue=9e-64,
Organism=Homo sapiens, GI10947137, Length=528, Percent_Identity=29.7348484848485, Blast_Score=199, Evalue=6e-51,
Organism=Homo sapiens, GI27881506, Length=528, Percent_Identity=29.7348484848485, Blast_Score=199, Evalue=7e-51,
Organism=Homo sapiens, GI10947135, Length=529, Percent_Identity=27.2211720226843, Blast_Score=178, Evalue=1e-44,
Organism=Homo sapiens, GI69354671, Length=529, Percent_Identity=27.2211720226843, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI27262624, Length=248, Percent_Identity=29.4354838709677, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI27262626, Length=248, Percent_Identity=29.4354838709677, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI1787041, Length=516, Percent_Identity=31.2015503875969, Blast_Score=261, Evalue=7e-71,
Organism=Escherichia coli, GI1789751, Length=493, Percent_Identity=29.6146044624746, Blast_Score=237, Evalue=1e-63,
Organism=Escherichia coli, GI1787182, Length=525, Percent_Identity=31.4285714285714, Blast_Score=226, Evalue=2e-60,
Organism=Escherichia coli, GI2367384, Length=492, Percent_Identity=31.7073170731707, Blast_Score=217, Evalue=1e-57,
Organism=Escherichia coli, GI1789962, Length=214, Percent_Identity=25.7009345794392, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI48994997, Length=239, Percent_Identity=23.0125523012552, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1787143, Length=229, Percent_Identity=29.6943231441048, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1788897, Length=209, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17559834, Length=517, Percent_Identity=28.2398452611219, Blast_Score=213, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17553372, Length=512, Percent_Identity=30.46875, Blast_Score=201, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17555318, Length=520, Percent_Identity=27.6923076923077, Blast_Score=196, Evalue=4e-50,
Organism=Saccharomyces cerevisiae, GI6320874, Length=516, Percent_Identity=30.4263565891473, Blast_Score=218, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6321121, Length=500, Percent_Identity=29.4, Blast_Score=193, Evalue=5e-50,
Organism=Saccharomyces cerevisiae, GI6325030, Length=388, Percent_Identity=26.2886597938144, Blast_Score=106, Evalue=9e-24,
Organism=Saccharomyces cerevisiae, GI6324314, Length=383, Percent_Identity=26.1096605744125, Blast_Score=104, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6323278, Length=385, Percent_Identity=25.4545454545455, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24666836, Length=506, Percent_Identity=31.4229249011858, Blast_Score=246, Evalue=3e-65,
Organism=Drosophila melanogaster, GI24642252, Length=531, Percent_Identity=29.5668549905838, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI18859989, Length=531, Percent_Identity=29.5668549905838, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI24641342, Length=531, Percent_Identity=27.683615819209, Blast_Score=186, Evalue=3e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58564; Mature: 58433

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLKVTNLSQCFMDKSLYEKANFDLFKGEHIGVVGQNGTGKSTLIKILLGEVVPDSGEI
CCCEEECCHHHHHHHHHHHHHCCCCEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCE
KWQPNINIGHLDQYAEINRDTTISLYLHTAFEELYKIEKEMNLLYQKSAISENEQYLIKA
EECCCCCCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
SDYQEQLIANNFYSIDNEINKIANGLGLDSIGMNRVVRELSGGQRAKVILAKLLLSNHDV
CCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCE
LLLDEPTNFLDKEHVEWLSNYLNTFNGAFIVVSHDFDFLEKISTGILDIEFGMIKKYHGK
EEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCEEEEHHHHHHHHCCH
YSEFLKQKSRLREDYIRRYQAQQKKIEKEETFIRKNKAGVNSKIARGRQKQLDKIERIAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHCCC
PSFTGKPNIQFSEIEISAQNALTITNLEVGYYYSLLPKLNFSVDGGQKIVITGFNGIGKS
CCCCCCCCEEEEEEEEECCCEEEEEEEEHHHHHEECCCCCEEECCCCEEEEECCCCCCHH
TLLKTLVKDIPRISGDFQFSEQVKIGYYEQDLKWENPDKTPLQIVADKYPKLNTKEIRRH
HHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCHHHHHHH
LARCGVKEEHVSRSVSTLSGGEQSKVKLCCMMLSPCNFLILDEPTNHFDAETKDALQNAL
HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHH
KQFRGSIILVSHEEKFYKGWIDKVFNIEKQLV
HHHCCCEEEEECCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLLKVTNLSQCFMDKSLYEKANFDLFKGEHIGVVGQNGTGKSTLIKILLGEVVPDSGEI
CCEEECCHHHHHHHHHHHHHCCCCEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCE
KWQPNINIGHLDQYAEINRDTTISLYLHTAFEELYKIEKEMNLLYQKSAISENEQYLIKA
EECCCCCCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
SDYQEQLIANNFYSIDNEINKIANGLGLDSIGMNRVVRELSGGQRAKVILAKLLLSNHDV
CCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCE
LLLDEPTNFLDKEHVEWLSNYLNTFNGAFIVVSHDFDFLEKISTGILDIEFGMIKKYHGK
EEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCEEEEHHHHHHHHCCH
YSEFLKQKSRLREDYIRRYQAQQKKIEKEETFIRKNKAGVNSKIARGRQKQLDKIERIAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHCCC
PSFTGKPNIQFSEIEISAQNALTITNLEVGYYYSLLPKLNFSVDGGQKIVITGFNGIGKS
CCCCCCCCEEEEEEEEECCCEEEEEEEEHHHHHEECCCCCEEECCCCEEEEECCCCCCHH
TLLKTLVKDIPRISGDFQFSEQVKIGYYEQDLKWENPDKTPLQIVADKYPKLNTKEIRRH
HHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCHHHHHHH
LARCGVKEEHVSRSVSTLSGGEQSKVKLCCMMLSPCNFLILDEPTNHFDAETKDALQNAL
HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHH
KQFRGSIILVSHEEKFYKGWIDKVFNIEKQLV
HHHCCCEEEEECCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]