Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126700952

Identifier: 126700952

GI number: 126700952

Start: 3896015

End: 3896260

Strand: Direct

Name: 126700952

Synonym: CD3333

Alternate gene names: NA

Gene position: 3896015-3896260 (Clockwise)

Preceding gene: 126700951

Following gene: 126700953

Centisome position: 90.81

GC content: 31.3

Gene sequence:

>246_bases
ATGATGGGAGAATTTATTATCTATTATCGTGGAAAAATCGTTGGCGGTATATATGATGATAGGTTACTGGTAAAACCAAC
AAAGTCTGCAATTTCTTATATGCCAACAGTTACTTATGAAATTCCATACGAAAATGCCAAAGAAATGTTATTGGTGGAAG
AAATTGATAATAAAGATTTTCTGACGGGGTTATTTAATGTGATGTATGATGAACTACCAACGCCAAAACCTAAAAAGAAA
AAATAA

Upstream 100 bases:

>100_bases
ATCCTGATAAAGTAAGAAAAGAATTATCCGAAGCAATTGACACACTACTATTGGGAGCTAATCAAAAATATAAAGACTAC
AAGAAATAACATATCGTGCA

Downstream 100 bases:

>100_bases
ACAGTTCCTAACTTGACAATTTCATATCCATACATACAAAGCAGTTAGTCTTAGGATTGACTGCTTTTTTCTTACCAAAA
TTATAGATTGGAGTAATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: TfoX N- Domain Family Protein; TfoX Domain Protein; Regulator Of Competence-Specific Genes; TfoX N-Terminal Domain Family Protein; TfoX N-Terminal Domain-Containing Protein

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MMGEFIIYYRGKIVGGIYDDRLLVKPTKSAISYMPTVTYEIPYENAKEMLLVEEIDNKDFLTGLFNVMYDELPTPKPKKK
K

Sequences:

>Translated_81_residues
MMGEFIIYYRGKIVGGIYDDRLLVKPTKSAISYMPTVTYEIPYENAKEMLLVEEIDNKDFLTGLFNVMYDELPTPKPKKK
K
>Mature_81_residues
MMGEFIIYYRGKIVGGIYDDRLLVKPTKSAISYMPTVTYEIPYENAKEMLLVEEIDNKDFLTGLFNVMYDELPTPKPKKK
K

Specific function: Unknown

COG id: COG3070

COG function: function code K; Regulator of competence-specific genes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9443; Mature: 9443

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGEFIIYYRGKIVGGIYDDRLLVKPTKSAISYMPTVTYEIPYENAKEMLLVEEIDNKDF
CCCCEEEEECCEEECCCCCCEEEEEECHHHHHHCCEEEEECCCCCCCCEEEEEECCCCHH
LTGLFNVMYDELPTPKPKKKK
HHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MMGEFIIYYRGKIVGGIYDDRLLVKPTKSAISYMPTVTYEIPYENAKEMLLVEEIDNKDF
CCCCEEEEECCEEECCCCCCEEEEEECHHHHHHCCEEEEECCCCCCCCEEEEEECCCCHH
LTGLFNVMYDELPTPKPKKKK
HHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA