Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is chrA [H]

Identifier: 126700921

GI number: 126700921

Start: 3866714

End: 3867226

Strand: Direct

Name: chrA [H]

Synonym: CD3302

Alternate gene names: 126700921

Gene position: 3866714-3867226 (Clockwise)

Preceding gene: 126700918

Following gene: 126700922

Centisome position: 90.13

GC content: 29.63

Gene sequence:

>513_bases
ATGTTGAAATTGTTTTTAACCTTTTTAAAAATTGGTGCGTTTACATTTGGTGGTGGATACGCTATGGTTCCTCTTATACA
AGATGAACTTGTAAACAAACAAAAACTTTTAGAGCAGGAAGAATTTATTGATTATTTATCCATAGCTCAAAGTTATCCTG
GAGTACTGGCAGTTAATATATCTGTATTATTAGGATATAAACTTTATGGTATACCAGGAGTTCTTATATGTACCTTAGGC
TCTGCTTTACCATCATTTTGTATAGTCTTAGTCTTATCGTATCTATACTTTAAAAATTCATCATCTAAAATTTTAGATGG
ATTTTTTAAAGGAGTTGCGCCTGTTGTAATAGCTCTTATATTGTATTCTTTTACGAGCATGTTCAAGAAACTACCAAAGT
CTAAAACTAACATACTACTATTAATTATAGCAGTTTTATCTGTTGGTGTATTCAATATAAGCCCTATTTATTTAATAATT
GGAGGAGGTGTATATAGTCTATGTCAGAAATAA

Upstream 100 bases:

>100_bases
TAAATTCTTAGAATACTATCATACTATATTATCTTTTTATTATGATATAATATTAATATTAGTATACTTAGATGTTATTT
ATCTTTTGGAGGTTTCTATT

Downstream 100 bases:

>100_bases
TACTACTCTTCTTAATATTCCTTAAAATAGGGGCATTTAGTTTTGGTGGCGGTTATGCCATGCTACCATTTATCCAGCAA
GAATTTATATCTAAATATCA

Product: chromate transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MLKLFLTFLKIGAFTFGGGYAMVPLIQDELVNKQKLLEQEEFIDYLSIAQSYPGVLAVNISVLLGYKLYGIPGVLICTLG
SALPSFCIVLVLSYLYFKNSSSKILDGFFKGVAPVVIALILYSFTSMFKKLPKSKTNILLLIIAVLSVGVFNISPIYLII
GGGVYSLCQK

Sequences:

>Translated_170_residues
MLKLFLTFLKIGAFTFGGGYAMVPLIQDELVNKQKLLEQEEFIDYLSIAQSYPGVLAVNISVLLGYKLYGIPGVLICTLG
SALPSFCIVLVLSYLYFKNSSSKILDGFFKGVAPVVIALILYSFTSMFKKLPKSKTNILLLIIAVLSVGVFNISPIYLII
GGGVYSLCQK
>Mature_170_residues
MLKLFLTFLKIGAFTFGGGYAMVPLIQDELVNKQKLLEQEEFIDYLSIAQSYPGVLAVNISVLLGYKLYGIPGVLICTLG
SALPSFCIVLVLSYLYFKNSSSKILDGFFKGVAPVVIALILYSFTSMFKKLPKSKTNILLLIIAVLSVGVFNISPIYLII
GGGVYSLCQK

Specific function: Unknown

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 18580; Mature: 18580

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLFLTFLKIGAFTFGGGYAMVPLIQDELVNKQKLLEQEEFIDYLSIAQSYPGVLAVNI
CHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHH
SVLLGYKLYGIPGVLICTLGSALPSFCIVLVLSYLYFKNSSSKILDGFFKGVAPVVIALI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LYSFTSMFKKLPKSKTNILLLIIAVLSVGVFNISPIYLIIGGGVYSLCQK
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCC
>Mature Secondary Structure
MLKLFLTFLKIGAFTFGGGYAMVPLIQDELVNKQKLLEQEEFIDYLSIAQSYPGVLAVNI
CHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHH
SVLLGYKLYGIPGVLICTLGSALPSFCIVLVLSYLYFKNSSSKILDGFFKGVAPVVIALI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LYSFTSMFKKLPKSKTNILLLIIAVLSVGVFNISPIYLIIGGGVYSLCQK
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]