Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126700869

Identifier: 126700869

GI number: 126700869

Start: 3804694

End: 3805239

Strand: Direct

Name: 126700869

Synonym: CD3250

Alternate gene names: NA

Gene position: 3804694-3805239 (Clockwise)

Preceding gene: 126700868

Following gene: 126700871

Centisome position: 88.68

GC content: 26.92

Gene sequence:

>546_bases
ATGATATTTATGTTTGAAAACTCGTCTGAAGAATTAGCCTATCACAAACTTTTAATTTTATATATATTAGAAAAAATTAA
AATGGATTTAACTAATTCTCAAATAACTCAAGTAGTATTAGAGACTGAGATGATGAATTATTTTTCATTACAACAGCTTT
TATCTCAGCTTATGGAATCTAAGTTTTTGACTACATATAAAGACTCTGACAGAGAATATTATGCTCTTACTCAAAGAGGC
GTAGAAAGTCTAGAATACTTCTTTAATCGAATACCTACTAGTGTTACTGAAAAAATAGACAAGTATATAGATTCTAACAA
AGAAAATCTACTAGCAGATACTCAAGTAAAGTCTAGTTTTGTAAAACAAAGTGATAATGAATTTATTGTCAACCTTAGAG
TCATAGAAAATCAGTCTAACTTAATAGATTTAAATCTAAATGTTTCATCAGAGAAACAAGCAAAACTTATTTGCAATAAC
TGGAAAAATAATGCATCTTATATGTATGCCGAAGTTATCGATTTACTTATAAGAGACATACATTAA

Upstream 100 bases:

>100_bases
TTATATGAATTATTAAAGATTAATAATACAATACAAATTGTTCTTTTAATTTTGTACAAATTAGTTTAATATATTATATA
TAGAAATAGTTTGACGGAGG

Downstream 100 bases:

>100_bases
AGCCTACAAACAAATTATAGTTGTAGGCTCTTTTCCTACCTTGATTTCTTTTATTAATTTGTTATTTGCAGTTTCATAAA
CTTTTACTGAATTTTCTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MIFMFENSSEELAYHKLLILYILEKIKMDLTNSQITQVVLETEMMNYFSLQQLLSQLMESKFLTTYKDSDREYYALTQRG
VESLEYFFNRIPTSVTEKIDKYIDSNKENLLADTQVKSSFVKQSDNEFIVNLRVIENQSNLIDLNLNVSSEKQAKLICNN
WKNNASYMYAEVIDLLIRDIH

Sequences:

>Translated_181_residues
MIFMFENSSEELAYHKLLILYILEKIKMDLTNSQITQVVLETEMMNYFSLQQLLSQLMESKFLTTYKDSDREYYALTQRG
VESLEYFFNRIPTSVTEKIDKYIDSNKENLLADTQVKSSFVKQSDNEFIVNLRVIENQSNLIDLNLNVSSEKQAKLICNN
WKNNASYMYAEVIDLLIRDIH
>Mature_181_residues
MIFMFENSSEELAYHKLLILYILEKIKMDLTNSQITQVVLETEMMNYFSLQQLLSQLMESKFLTTYKDSDREYYALTQRG
VESLEYFFNRIPTSVTEKIDKYIDSNKENLLADTQVKSSFVKQSDNEFIVNLRVIENQSNLIDLNLNVSSEKQAKLICNN
WKNNASYMYAEVIDLLIRDIH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21343; Mature: 21343

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFMFENSSEELAYHKLLILYILEKIKMDLTNSQITQVVLETEMMNYFSLQQLLSQLMES
CEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFLTTYKDSDREYYALTQRGVESLEYFFNRIPTSVTEKIDKYIDSNKENLLADTQVKSSF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
VKQSDNEFIVNLRVIENQSNLIDLNLNVSSEKQAKLICNNWKNNASYMYAEVIDLLIRDI
HHCCCCCEEEEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
H
C
>Mature Secondary Structure
MIFMFENSSEELAYHKLLILYILEKIKMDLTNSQITQVVLETEMMNYFSLQQLLSQLMES
CEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFLTTYKDSDREYYALTQRGVESLEYFFNRIPTSVTEKIDKYIDSNKENLLADTQVKSSF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
VKQSDNEFIVNLRVIENQSNLIDLNLNVSSEKQAKLICNNWKNNASYMYAEVIDLLIRDI
HHCCCCCEEEEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
H
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA