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The map label for this gene is sspB

Identifier: 126700868

GI number: 126700868

Start: 3804291

End: 3804512

Strand: Direct

Name: sspB

Synonym: CD3249

Alternate gene names: NA

Gene position: 3804291-3804512 (Clockwise)

Preceding gene: 126700861

Following gene: 126700869

Centisome position: 88.67

GC content: 31.53

Gene sequence:

>222_bases
TTGAGGAGGAAATTTACTATGTCAAATTCAAACAGAACAGTAGTTCCAGAAGCAAAAGCTGCTTTAAACCAAATGAAATT
AGAAATAGCTAACGAAATAGGTTTATCTAACTATGAAAACATAGACAAAGGTAACTTAACAGCTAGAGAAAATGGATATG
TTGGTGGATATATGACTAAGAAATTAGTTGAAATGGCTGAAAGACAAATGGCTGGAAAATAA

Upstream 100 bases:

>100_bases
TTTTTACCTTTATTTTTCTGTATATATTATTTTTATTTTGGAGAAATTAGTATTAACATCACATAAATAAAAGTGTTGTT
AGACATCATAAACTAATTAT

Downstream 100 bases:

>100_bases
ATAGTAAATTTTGACACCTGGGTATCAACAGGGCTGCTAATTAGCAGCCCTGTTTTTCTATATTTATTTATAAAATTGTT
TTTATATGAATTATTAAAGA

Product: small acid-soluble spore protein B

Products: NA

Alternate protein names: ASSP; SASP [H]

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MRRKFTMSNSNRTVVPEAKAALNQMKLEIANEIGLSNYENIDKGNLTARENGYVGGYMTKKLVEMAERQMAGK

Sequences:

>Translated_73_residues
MRRKFTMSNSNRTVVPEAKAALNQMKLEIANEIGLSNYENIDKGNLTARENGYVGGYMTKKLVEMAERQMAGK
>Mature_73_residues
MRRKFTMSNSNRTVVPEAKAALNQMKLEIANEIGLSNYENIDKGNLTARENGYVGGYMTKKLVEMAERQMAGK

Specific function: SASP are bound to spore DNA. They are double-stranded DNA-binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to U

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alpha/beta-type SASP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001448
- InterPro:   IPR018126 [H]

Pfam domain/function: PF00269 SASP [H]

EC number: NA

Molecular weight: Translated: 8213; Mature: 8213

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS00304 SASP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.2 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.2 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRKFTMSNSNRTVVPEAKAALNQMKLEIANEIGLSNYENIDKGNLTARENGYVGGYMTK
CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCHHHHH
KLVEMAERQMAGK
HHHHHHHHHHCCC
>Mature Secondary Structure
MRRKFTMSNSNRTVVPEAKAALNQMKLEIANEIGLSNYENIDKGNLTARENGYVGGYMTK
CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCHHHHH
KLVEMAERQMAGK
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2599354 [H]