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The map label for this gene is licR [H]

Identifier: 126700700

GI number: 126700700

Start: 3579533

End: 3581446

Strand: Direct

Name: licR [H]

Synonym: CD3083

Alternate gene names: 126700700

Gene position: 3579533-3581446 (Clockwise)

Preceding gene: 126700690

Following gene: 126700707

Centisome position: 83.43

GC content: 23.98

Gene sequence:

>1914_bases
ATGAAAACATCTAAAAAAGAACTATTTTTAAATTTCATAAAAACACAACATGACTGGATAGATTCATCTACATTGGCTAA
TTATCTTAATGTCTCAACGCGTTCAATTAGAAAATATGTAAACGAAATTAATTCCAATGGTGAATTTATATTATCCTCTA
AAAAAGGATATAAAGTAAATCTCAATAATAATTGTCAAACCAAGGTTGATAGTTCAGAAAATATATCACCTGATAACAGG
TTAAATTTAATTTTAAAAGAACTTATAGTTAATAGTAATGGAATTAATATATTTGATTTAAGTGAAGAATTGTTTGTTAG
CCCAGCTACTATTGAAGGGGATATAGTCAAAGCTAATAAATTTATAGGAAGTTATAATTTAAAGATAAAGCAATCGAAAT
TTTTATTGAAACTAATTGGAAATGAATCTGCAAAGCGCAAGTTAATGAGCTCTATAATATTTAAAGAAACGGGAAGTGAT
TTTTTAAGCTTATTTGATGTACAAAAAATATATCAAGAGTATAATTTGACTAAACTAAAAGAAAATATAATATATATATT
AAAAAAATACAATTTATTTATAAATGAGTATGCTATAAACAACATACTTCTTCATTTAATGATAACTATAGACAGAATAA
AAAAGAATAATTACATAGACTCTGTTGAAGTAGTAAACTACATAGACAATAACGTAGATATAAATATTGCAAAAGACATA
TCAAATTTTTTAGAATCTGAATACAATATAACTTTAACTAGTGCGGAATTATACTATTTAGTATTTCAGTTAACAAACAA
AACTACAGTCTTAAACTACAATCAAATGGATACTAAATCATTGTCAAATTATATAGATGAGCACTTTGTTAAATTAACTA
AAAAAATAATTAAAAATGTATATGACTTATATCTTATAGATTTATCTGATGAGGAATTTGTTGTAAAATTTACTCTTCAT
GTAAAAAATTTAATCAGTAGAGCCAAAAATAATCAAGTTTTAAGAAATCAAATACCTCAAAAGTTAAAAGATTCCTACCC
TTTGATATATGATATATCTGTTTATATTTGCAATCAGATTCAAACTTTAGAAAATGTAGATATAGACGAAGATGAAATAT
CTTATATATCTCTTCATGTAGGTTCATTCTTTGATAGACAAAAATTATTAGAAGATAAAGTTCTATGTGCATTAATTACT
CCAAATTACTATGATTTACAATTCAAAATAGTAAGAGACCTCGAGAAGAGATTTAATGAATCCATAGAAATTATTCAGAT
TTTTTCAGATACTCATAATCTTGATTTTGACAATAAGGTAGACATGGTTATTACTACTTTACCAATTAACAATAGATGCC
CTATACCTTTTGTTTATGTAAATCCTTACCTAAATAGAAAGGATTATGATAATATTCAAAGTAAATTTACTCAAATTAAA
GATAGAAAAAATATACTTACTGTACAAAATCATTTAGAAATGTACTTTAGTGAATCTTTGTTTATGAAAAATATATATTT
AGATAGTGCTAAAGATTATATAAAATTTATGGGAAATATTCTGTACGAAAATAAATATGTCAAACCCAATTATATAGATG
ATGTTCTTATAAGAGAAAAAATGTCTTCAACTGCATTTAATAACAATGTAGCAATTCCTCATAGCATGAAAATGGATGCT
TTAAAAACTGGAGTATGTTTAATTGTTAACGATAAACCAGTTAAATGGGGTGAGGAAAAAGTTCAAATTATAGCTATGAT
ACCTATAAATGAAAAAGAAAAAGAAAAATTCAATTACATATTTGAAAGCTTTATTGAAATATTATCTGAGTGGAATAATG
TTAAAGAACTTACTAAGGCAGATAACTATAGTAGTTTTATGAATAGAATAGCTTATCTTATTCAAAATATCTAA

Upstream 100 bases:

>100_bases
AACATATTAATATAGTATAATGTATCTTATAATACGTACATTCAATTATATAATTATCATATCATCCAGATTTTATTTTA
AAACTATGCGAGGGAATCTA

Downstream 100 bases:

>100_bases
ATCAATTAATTTATTTCCAATATATGTTTCTTAAGTTATTAACATAAAATAGATAAGCTGTCACACTAAAAAGTCTAAAT
TAATATGTGACAGCTTTTTA

Product: transcription antiterminator

Products: NA

Alternate protein names: Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]

Number of amino acids: Translated: 637; Mature: 637

Protein sequence:

>637_residues
MKTSKKELFLNFIKTQHDWIDSSTLANYLNVSTRSIRKYVNEINSNGEFILSSKKGYKVNLNNNCQTKVDSSENISPDNR
LNLILKELIVNSNGINIFDLSEELFVSPATIEGDIVKANKFIGSYNLKIKQSKFLLKLIGNESAKRKLMSSIIFKETGSD
FLSLFDVQKIYQEYNLTKLKENIIYILKKYNLFINEYAINNILLHLMITIDRIKKNNYIDSVEVVNYIDNNVDINIAKDI
SNFLESEYNITLTSAELYYLVFQLTNKTTVLNYNQMDTKSLSNYIDEHFVKLTKKIIKNVYDLYLIDLSDEEFVVKFTLH
VKNLISRAKNNQVLRNQIPQKLKDSYPLIYDISVYICNQIQTLENVDIDEDEISYISLHVGSFFDRQKLLEDKVLCALIT
PNYYDLQFKIVRDLEKRFNESIEIIQIFSDTHNLDFDNKVDMVITTLPINNRCPIPFVYVNPYLNRKDYDNIQSKFTQIK
DRKNILTVQNHLEMYFSESLFMKNIYLDSAKDYIKFMGNILYENKYVKPNYIDDVLIREKMSSTAFNNNVAIPHSMKMDA
LKTGVCLIVNDKPVKWGEEKVQIIAMIPINEKEKEKFNYIFESFIEILSEWNNVKELTKADNYSSFMNRIAYLIQNI

Sequences:

>Translated_637_residues
MKTSKKELFLNFIKTQHDWIDSSTLANYLNVSTRSIRKYVNEINSNGEFILSSKKGYKVNLNNNCQTKVDSSENISPDNR
LNLILKELIVNSNGINIFDLSEELFVSPATIEGDIVKANKFIGSYNLKIKQSKFLLKLIGNESAKRKLMSSIIFKETGSD
FLSLFDVQKIYQEYNLTKLKENIIYILKKYNLFINEYAINNILLHLMITIDRIKKNNYIDSVEVVNYIDNNVDINIAKDI
SNFLESEYNITLTSAELYYLVFQLTNKTTVLNYNQMDTKSLSNYIDEHFVKLTKKIIKNVYDLYLIDLSDEEFVVKFTLH
VKNLISRAKNNQVLRNQIPQKLKDSYPLIYDISVYICNQIQTLENVDIDEDEISYISLHVGSFFDRQKLLEDKVLCALIT
PNYYDLQFKIVRDLEKRFNESIEIIQIFSDTHNLDFDNKVDMVITTLPINNRCPIPFVYVNPYLNRKDYDNIQSKFTQIK
DRKNILTVQNHLEMYFSESLFMKNIYLDSAKDYIKFMGNILYENKYVKPNYIDDVLIREKMSSTAFNNNVAIPHSMKMDA
LKTGVCLIVNDKPVKWGEEKVQIIAMIPINEKEKEKFNYIFESFIEILSEWNNVKELTKADNYSSFMNRIAYLIQNI
>Mature_637_residues
MKTSKKELFLNFIKTQHDWIDSSTLANYLNVSTRSIRKYVNEINSNGEFILSSKKGYKVNLNNNCQTKVDSSENISPDNR
LNLILKELIVNSNGINIFDLSEELFVSPATIEGDIVKANKFIGSYNLKIKQSKFLLKLIGNESAKRKLMSSIIFKETGSD
FLSLFDVQKIYQEYNLTKLKENIIYILKKYNLFINEYAINNILLHLMITIDRIKKNNYIDSVEVVNYIDNNVDINIAKDI
SNFLESEYNITLTSAELYYLVFQLTNKTTVLNYNQMDTKSLSNYIDEHFVKLTKKIIKNVYDLYLIDLSDEEFVVKFTLH
VKNLISRAKNNQVLRNQIPQKLKDSYPLIYDISVYICNQIQTLENVDIDEDEISYISLHVGSFFDRQKLLEDKVLCALIT
PNYYDLQFKIVRDLEKRFNESIEIIQIFSDTHNLDFDNKVDMVITTLPINNRCPIPFVYVNPYLNRKDYDNIQSKFTQIK
DRKNILTVQNHLEMYFSESLFMKNIYLDSAKDYIKFMGNILYENKYVKPNYIDDVLIREKMSSTAFNNNVAIPHSMKMDA
LKTGVCLIVNDKPVKWGEEKVQIIAMIPINEKEKEKFNYIFESFIEILSEWNNVKELTKADNYSSFMNRIAYLIQNI

Specific function: Positive regulator of the licABCH operon [H]

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR007737
- InterPro:   IPR011608
- InterPro:   IPR016152
- InterPro:   IPR002178
- InterPro:   IPR013011
- InterPro:   IPR003501
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF00359 PTS_EIIA_2; PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 74677; Mature: 74677

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS51094 PTS_EIIA_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSKKELFLNFIKTQHDWIDSSTLANYLNVSTRSIRKYVNEINSNGEFILSSKKGYKVN
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCEEEE
LNNNCQTKVDSSENISPDNRLNLILKELIVNSNGINIFDLSEELFVSPATIEGDIVKANK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCHHHEECCCCCCCCEEEEEH
FIGSYNLKIKQSKFLLKLIGNESAKRKLMSSIIFKETGSDFLSLFDVQKIYQEYNLTKLK
EEEEEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHH
ENIIYILKKYNLFINEYAINNILLHLMITIDRIKKNNYIDSVEVVNYIDNNVDINIAKDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEHHHH
SNFLESEYNITLTSAELYYLVFQLTNKTTVLNYNQMDTKSLSNYIDEHFVKLTKKIIKNV
HHHHCCCCCEEEECCEEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
YDLYLIDLSDEEFVVKFTLHVKNLISRAKNNQVLRNQIPQKLKDSYPLIYDISVYICNQI
HEEEEEEECCCCEEEEEHHHHHHHHHHHCCCCHHHHHCCHHHHCCCCEEEEEHHHHHHHH
QTLENVDIDEDEISYISLHVGSFFDRQKLLEDKVLCALITPNYYDLQFKIVRDLEKRFNE
HHHHCCCCCCCCEEEEEEEHHCHHHHHHHHHCCEEEEEECCCEEEEHHHHHHHHHHHHCC
SIEIIQIFSDTHNLDFDNKVDMVITTLPINNRCPIPFVYVNPYLNRKDYDNIQSKFTQIK
CEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHH
DRKNILTVQNHLEMYFSESLFMKNIYLDSAKDYIKFMGNILYENKYVKPNYIDDVLIREK
HCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
MSSTAFNNNVAIPHSMKMDALKTGVCLIVNDKPVKWGEEKVQIIAMIPINEKEKEKFNYI
HHHHCCCCCCCCCCCCCHHHHHCCEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHH
FESFIEILSEWNNVKELTKADNYSSFMNRIAYLIQNI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTSKKELFLNFIKTQHDWIDSSTLANYLNVSTRSIRKYVNEINSNGEFILSSKKGYKVN
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCEEEE
LNNNCQTKVDSSENISPDNRLNLILKELIVNSNGINIFDLSEELFVSPATIEGDIVKANK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCHHHEECCCCCCCCEEEEEH
FIGSYNLKIKQSKFLLKLIGNESAKRKLMSSIIFKETGSDFLSLFDVQKIYQEYNLTKLK
EEEEEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHH
ENIIYILKKYNLFINEYAINNILLHLMITIDRIKKNNYIDSVEVVNYIDNNVDINIAKDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEHHHH
SNFLESEYNITLTSAELYYLVFQLTNKTTVLNYNQMDTKSLSNYIDEHFVKLTKKIIKNV
HHHHCCCCCEEEECCEEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
YDLYLIDLSDEEFVVKFTLHVKNLISRAKNNQVLRNQIPQKLKDSYPLIYDISVYICNQI
HEEEEEEECCCCEEEEEHHHHHHHHHHHCCCCHHHHHCCHHHHCCCCEEEEEHHHHHHHH
QTLENVDIDEDEISYISLHVGSFFDRQKLLEDKVLCALITPNYYDLQFKIVRDLEKRFNE
HHHHCCCCCCCCEEEEEEEHHCHHHHHHHHHCCEEEEEECCCEEEEHHHHHHHHHHHHCC
SIEIIQIFSDTHNLDFDNKVDMVITTLPINNRCPIPFVYVNPYLNRKDYDNIQSKFTQIK
CEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHH
DRKNILTVQNHLEMYFSESLFMKNIYLDSAKDYIKFMGNILYENKYVKPNYIDDVLIREK
HCCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
MSSTAFNNNVAIPHSMKMDALKTGVCLIVNDKPVKWGEEKVQIIAMIPINEKEKEKFNYI
HHHHCCCCCCCCCCCCCHHHHHCCEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHH
FESFIEILSEWNNVKELTKADNYSSFMNRIAYLIQNI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377; 10438772 [H]