Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126700593

Identifier: 126700593

GI number: 126700593

Start: 3453760

End: 3454539

Strand: Direct

Name: 126700593

Synonym: CD2972

Alternate gene names: NA

Gene position: 3453760-3454539 (Clockwise)

Preceding gene: 126700587

Following gene: 126700617

Centisome position: 80.5

GC content: 24.1

Gene sequence:

>780_bases
ATGAAAGTTAATGAAAATAATATAAATAATATAGATGAAGAGTTAGATGAACTTAGTAGGAAAGTTTACTTAGAGTCACC
AGATTTTTGGATAAGTATTTCTGACAAAATAATAGATAAAGTATTTGATGAAATGTTATTATTTTTTGCAGTTAAATATA
ACTATTTCAATATAGTATGCTTTGCTATTGAAAACAATTATCTGGATTTAAACATGCCTTCAAAAAACAAAAAATACACT
AATATAATGGAGCATTTGTTAGATACATCAAAACAGAATGAAGATAAAAAAATTTATAATTATCTTCTAAGCTTAAATAA
AGGTAATAACCTAGATGAAAGACCAATTTTAGATGAATTAAACTGTAATATTAGTAGTGATACTTTTGAAAAAAAAGATA
TATATCTTCCAAAGTACTTATGTCCAAGTTGTAATTCTAATATATTTGATACAGGTTATAAAGTATCAAATGACATAACA
TATAAATTTTCTTCTAAAGAAGCTGAACCTATTGAAATGTGTAGTGAAGTTTCTTCTATCAGATGTTGTAATTGTGATGA
ATTATTAGAAGATATTACACTTGATAAACTATATAACCTATGCAAAATTCAAAACTGTAATAATTGTGGTTCTAATTTAA
CTAAGGTAGGAATTATTGCAAAGAAAAAAATGAACTTTGATGAGAATACTGAAAAATTTAAAGATGTCTCAACATCTTAC
TGTTGTGGAAATTGTGACTCTGAAATAAACTTATCTCAAAGAGAACATTTTAAGATTTAA

Upstream 100 bases:

>100_bases
TGTAAATTATAATATGATATATTTTTATATAAGATTTTATTTTATATAAAAAATAGTAACAAATAGTTTATACACAAGAT
ATTTAAAAGGAAGTGATGAT

Downstream 100 bases:

>100_bases
ATATTTATAGGCTAAAGTAATAAGATTACATTATTAGATACTGTATAAGTTTTTTAAATCTGTAAAAATAAATACACTTA
TAAGAATTAAAATTGCTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKVNENNINNIDEELDELSRKVYLESPDFWISISDKIIDKVFDEMLLFFAVKYNYFNIVCFAIENNYLDLNMPSKNKKYT
NIMEHLLDTSKQNEDKKIYNYLLSLNKGNNLDERPILDELNCNISSDTFEKKDIYLPKYLCPSCNSNIFDTGYKVSNDIT
YKFSSKEAEPIEMCSEVSSIRCCNCDELLEDITLDKLYNLCKIQNCNNCGSNLTKVGIIAKKKMNFDENTEKFKDVSTSY
CCGNCDSEINLSQREHFKI

Sequences:

>Translated_259_residues
MKVNENNINNIDEELDELSRKVYLESPDFWISISDKIIDKVFDEMLLFFAVKYNYFNIVCFAIENNYLDLNMPSKNKKYT
NIMEHLLDTSKQNEDKKIYNYLLSLNKGNNLDERPILDELNCNISSDTFEKKDIYLPKYLCPSCNSNIFDTGYKVSNDIT
YKFSSKEAEPIEMCSEVSSIRCCNCDELLEDITLDKLYNLCKIQNCNNCGSNLTKVGIIAKKKMNFDENTEKFKDVSTSY
CCGNCDSEINLSQREHFKI
>Mature_259_residues
MKVNENNINNIDEELDELSRKVYLESPDFWISISDKIIDKVFDEMLLFFAVKYNYFNIVCFAIENNYLDLNMPSKNKKYT
NIMEHLLDTSKQNEDKKIYNYLLSLNKGNNLDERPILDELNCNISSDTFEKKDIYLPKYLCPSCNSNIFDTGYKVSNDIT
YKFSSKEAEPIEMCSEVSSIRCCNCDELLEDITLDKLYNLCKIQNCNNCGSNLTKVGIIAKKKMNFDENTEKFKDVSTSY
CCGNCDSEINLSQREHFKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30164; Mature: 30164

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVNENNINNIDEELDELSRKVYLESPDFWISISDKIIDKVFDEMLLFFAVKYNYFNIVC
CCCCCCCCCHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEE
FAIENNYLDLNMPSKNKKYTNIMEHLLDTSKQNEDKKIYNYLLSLNKGNNLDERPILDEL
EEEECCEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH
NCNISSDTFEKKDIYLPKYLCPSCNSNIFDTGYKVSNDITYKFSSKEAEPIEMCSEVSSI
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEECCCEEEEECCCCCCHHHHHHHHHHC
RCCNCDELLEDITLDKLYNLCKIQNCNNCGSNLTKVGIIAKKKMNFDENTEKFKDVSTSY
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEECCCCCCCHHHHHHCCCHH
CCGNCDSEINLSQREHFKI
CCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MKVNENNINNIDEELDELSRKVYLESPDFWISISDKIIDKVFDEMLLFFAVKYNYFNIVC
CCCCCCCCCHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEE
FAIENNYLDLNMPSKNKKYTNIMEHLLDTSKQNEDKKIYNYLLSLNKGNNLDERPILDEL
EEEECCEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH
NCNISSDTFEKKDIYLPKYLCPSCNSNIFDTGYKVSNDITYKFSSKEAEPIEMCSEVSSI
CCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEECCCEEEEECCCCCCHHHHHHHHHHC
RCCNCDELLEDITLDKLYNLCKIQNCNNCGSNLTKVGIIAKKKMNFDENTEKFKDVSTSY
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEECCCCCCCHHHHHHCCCHH
CCGNCDSEINLSQREHFKI
CCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA