| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126700431
Identifier: 126700431
GI number: 126700431
Start: 3285793
End: 3286269
Strand: Direct
Name: 126700431
Synonym: CD2815
Alternate gene names: NA
Gene position: 3285793-3286269 (Clockwise)
Preceding gene: 126700430
Following gene: 126700432
Centisome position: 76.59
GC content: 31.24
Gene sequence:
>477_bases ATGGCATGCAAACATTTTGGTGATTTATATTTTTATTTTTCCAAAGTGTTATTTGAAGAGTTTGGTGAAGATAAAACTAG CGAAATATTAAGAAAAGTTTTATTTGAAAGGTCTGAAGAAAGAGCTATTGCTATGAGAGAAAGAGCTCATGAAAATGGAG ATGAATTAATTGCAGACAATATTATTAGCACAACTGATGTTCCATTTCTAGGATGGGTTCCTGAATTTGAAGAGTTACAT TGCCCCTATGGAGCTTCCTGGCTTTTAAGATTTGAGGAAAATCCTTGGTTTAAAAAATTTGCTTCTCTTTACTGTGATGT TACAGATACTACTGTAGCTGAAGTATTTACAGGAGATACTTCCCATAAAATAACAAAAAACATTCTATGGGGAGATAAAA GTTGTGAAAGAATATATTTCCATGATGACAAGGTATCTGAAGGTAAATATACTTATGGAAATAAAAACTGTAAATAA
Upstream 100 bases:
>100_bases ATATTGTAACTAATACTTATTCTAAGGAGTGATTTTTTTGAACGAAGATGTTGTAACTAATGAAACTATTGACAAAGATT ATGCTATTGAAGAAGTTCGT
Downstream 100 bases:
>100_bases ATAATTTAAATTTTATATATTCATATACTATATTTTGTACTTTTTCATATAAATATTATAACTAGTCTTTTATTTTACTT TTGTTTAACCTAAAGATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MACKHFGDLYFYFSKVLFEEFGEDKTSEILRKVLFERSEERAIAMRERAHENGDELIADNIISTTDVPFLGWVPEFEELH CPYGASWLLRFEENPWFKKFASLYCDVTDTTVAEVFTGDTSHKITKNILWGDKSCERIYFHDDKVSEGKYTYGNKNCK
Sequences:
>Translated_158_residues MACKHFGDLYFYFSKVLFEEFGEDKTSEILRKVLFERSEERAIAMRERAHENGDELIADNIISTTDVPFLGWVPEFEELH CPYGASWLLRFEENPWFKKFASLYCDVTDTTVAEVFTGDTSHKITKNILWGDKSCERIYFHDDKVSEGKYTYGNKNCK >Mature_157_residues ACKHFGDLYFYFSKVLFEEFGEDKTSEILRKVLFERSEERAIAMRERAHENGDELIADNIISTTDVPFLGWVPEFEELHC PYGASWLLRFEENPWFKKFASLYCDVTDTTVAEVFTGDTSHKITKNILWGDKSCERIYFHDDKVSEGKYTYGNKNCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18525; Mature: 18394
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACKHFGDLYFYFSKVLFEEFGEDKTSEILRKVLFERSEERAIAMRERAHENGDELIADN CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHC IISTTDVPFLGWVPEFEELHCPYGASWLLRFEENPWFKKFASLYCDVTDTTVAEVFTGDT CCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHCCCC SHKITKNILWGDKSCERIYFHDDKVSEGKYTYGNKNCK CHHHHHHHHCCCCCCCEEEEECCCCCCCCEECCCCCCC >Mature Secondary Structure ACKHFGDLYFYFSKVLFEEFGEDKTSEILRKVLFERSEERAIAMRERAHENGDELIADN CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHC IISTTDVPFLGWVPEFEELHCPYGASWLLRFEENPWFKKFASLYCDVTDTTVAEVFTGDT CCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHCCCC SHKITKNILWGDKSCERIYFHDDKVSEGKYTYGNKNCK CHHHHHHHHCCCCCCCEEEEECCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA