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The map label for this gene is lytR [H]

Identifier: 126700382

GI number: 126700382

Start: 3214395

End: 3215360

Strand: Direct

Name: lytR [H]

Synonym: CD2766

Alternate gene names: 126700382

Gene position: 3214395-3215360 (Clockwise)

Preceding gene: 126700381

Following gene: 126700404

Centisome position: 74.92

GC content: 31.16

Gene sequence:

>966_bases
TTGTCAAAATTAAAGAAATTTGTTATACTACTGGCTTTCTTGGTAGTAATATTCCCTATAAGTGTCTATGGATATTTTTA
TTATAAATTATCTGCTATTCATGACTCGAGCATAAGTAGTGATTTATTGGATAACAATGACCATAAAAATGAAGATGGGA
TAATTAACATACTACTTATGGGAACAGATGCTAGACCAAATGAAGATTCTTCAAGGTCAGATGCTATGATGATACTTACT
ATTGATAACAAACACAATGATATCAAACTTACATCATTAGCTCGTGATAGCTATGTAGACATCCCTGGTCATGGTAAACA
AAAACTTACTCATGCTTATGCTTATGGACAAGCTGATTTATTAATACAAACAATTGAAGAGAATTTTAATATTGATATTC
AAAATTATGCTTGTGTTAATTTCGAATCATTTATGTATATAATTGATGCTATTGGTGGCGTTGAGGTTACTGTTGAAAAA
GGAGAAATACGAGAACTAAATAAATTTATTCCTGAAACTTATAAATGGAATAAAAGTGATGATAAAGGTAGCATACAATA
CATTAGAAACTCTGGAAAGCAGACTCTAAATGGATATCAGGCACTATCTTTTGCACGTATCAGACACAACGATACAGCCT
TTGCTAGAGATGGCAGACAGAGACAGATTATACAAGCTATAATCAAGAAAACGGAAACTTTACCTGTTACTAAATATCCA
GGTTTATTAGATGCAGTTCTTCCATATGTTAAGACTAACATGAAGCCTAATGCAATACTTTCTTTAGGAGCTCAAGTTTT
AAAAATGGGCGACTTAAATATTAAGCAATTTGAATTTCCTATTGATGATGAAATTCACAGTACAGGTGGTATATATGGAA
AAGCTGGATGGGTTCTTAGATTTGACCCAGATACTTTAGACATATTACACGATTTTATATTTAATGACATAGAGTTTAAA
CAATAA

Upstream 100 bases:

>100_bases
TTGTAACTGAAACAAGTATTGAATATATCTCAATACTTTAATATAATTAAGTGTATGCTATTAAAAAATATACAGGAAAA
AGAAGAAAGAAGGGGTACTT

Downstream 100 bases:

>100_bases
AAAATTCAACATAAAGTTTATTAAAAAGTATAAGATTAATTACTAAAAAAGAACTATATCGCATAATTATTTTCAAGTTG
CTGTGTACACTTGATTACAA

Product: penicillin-binding protein repressor

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MSKLKKFVILLAFLVVIFPISVYGYFYYKLSAIHDSSISSDLLDNNDHKNEDGIINILLMGTDARPNEDSSRSDAMMILT
IDNKHNDIKLTSLARDSYVDIPGHGKQKLTHAYAYGQADLLIQTIEENFNIDIQNYACVNFESFMYIIDAIGGVEVTVEK
GEIRELNKFIPETYKWNKSDDKGSIQYIRNSGKQTLNGYQALSFARIRHNDTAFARDGRQRQIIQAIIKKTETLPVTKYP
GLLDAVLPYVKTNMKPNAILSLGAQVLKMGDLNIKQFEFPIDDEIHSTGGIYGKAGWVLRFDPDTLDILHDFIFNDIEFK
Q

Sequences:

>Translated_321_residues
MSKLKKFVILLAFLVVIFPISVYGYFYYKLSAIHDSSISSDLLDNNDHKNEDGIINILLMGTDARPNEDSSRSDAMMILT
IDNKHNDIKLTSLARDSYVDIPGHGKQKLTHAYAYGQADLLIQTIEENFNIDIQNYACVNFESFMYIIDAIGGVEVTVEK
GEIRELNKFIPETYKWNKSDDKGSIQYIRNSGKQTLNGYQALSFARIRHNDTAFARDGRQRQIIQAIIKKTETLPVTKYP
GLLDAVLPYVKTNMKPNAILSLGAQVLKMGDLNIKQFEFPIDDEIHSTGGIYGKAGWVLRFDPDTLDILHDFIFNDIEFK
Q
>Mature_320_residues
SKLKKFVILLAFLVVIFPISVYGYFYYKLSAIHDSSISSDLLDNNDHKNEDGIINILLMGTDARPNEDSSRSDAMMILTI
DNKHNDIKLTSLARDSYVDIPGHGKQKLTHAYAYGQADLLIQTIEENFNIDIQNYACVNFESFMYIIDAIGGVEVTVEKG
EIRELNKFIPETYKWNKSDDKGSIQYIRNSGKQTLNGYQALSFARIRHNDTAFARDGRQRQIIQAIIKKTETLPVTKYPG
LLDAVLPYVKTNMKPNAILSLGAQVLKMGDLNIKQFEFPIDDEIHSTGGIYGKAGWVLRFDPDTLDILHDFIFNDIEFKQ

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 36461; Mature: 36330

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLKKFVILLAFLVVIFPISVYGYFYYKLSAIHDSSISSDLLDNNDHKNEDGIINILLM
CHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHCCCCCCCCCCEEEEEEE
GTDARPNEDSSRSDAMMILTIDNKHNDIKLTSLARDSYVDIPGHGKQKLTHAYAYGQADL
ECCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHCCCHHH
LIQTIEENFNIDIQNYACVNFESFMYIIDAIGGVEVTVEKGEIRELNKFIPETYKWNKSD
HHHHHHHCCCEEECCEEEECHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCCCC
DKGSIQYIRNSGKQTLNGYQALSFARIRHNDTAFARDGRQRQIIQAIIKKTETLPVTKYP
CCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCC
GLLDAVLPYVKTNMKPNAILSLGAQVLKMGDLNIKQFEFPIDDEIHSTGGIYGKAGWVLR
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHCCCCCEECCCEEEE
FDPDTLDILHDFIFNDIEFKQ
ECCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SKLKKFVILLAFLVVIFPISVYGYFYYKLSAIHDSSISSDLLDNNDHKNEDGIINILLM
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHCCCCCCCCCCEEEEEEE
GTDARPNEDSSRSDAMMILTIDNKHNDIKLTSLARDSYVDIPGHGKQKLTHAYAYGQADL
ECCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHCCCHHH
LIQTIEENFNIDIQNYACVNFESFMYIIDAIGGVEVTVEKGEIRELNKFIPETYKWNKSD
HHHHHHHCCCEEECCEEEECHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCCCC
DKGSIQYIRNSGKQTLNGYQALSFARIRHNDTAFARDGRQRQIIQAIIKKTETLPVTKYP
CCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCC
GLLDAVLPYVKTNMKPNAILSLGAQVLKMGDLNIKQFEFPIDDEIHSTGGIYGKAGWVLR
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHCCCCCEECCCEEEE
FDPDTLDILHDFIFNDIEFKQ
ECCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA