Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is corA [H]

Identifier: 126699739

GI number: 126699739

Start: 2456409

End: 2457344

Strand: Direct

Name: corA [H]

Synonym: CD2122

Alternate gene names: 126699739

Gene position: 2456409-2457344 (Clockwise)

Preceding gene: 126699737

Following gene: 126699741

Centisome position: 57.26

GC content: 27.67

Gene sequence:

>936_bases
ATGATAAGATATTACAAAACTATAGATTCAAAATTAGAGAAACTTAGTTTTTTTGAAGATGGCTGTTGGATAAATCTTGT
TGAACCTAATCATAGTGAAATCAACGAAATTTCTAATTTATTAAATATAGATGTAGAAAGCATAGAATCTGCACTAGATG
AAGAAGAACGCTCAAGAATAGATGTTGAAGACAATCATACTCTTATACTTATAGATATACCAGTAGACGAAAGTGACTCT
AATTCTTCTCATTATACTACAATACCCTTAGGTATTATACTAACTGAAGAAGCTATTGTAACAGTTTGTGATGCACAAAC
TAAGATTTTAAATGACTTTATAGTTGGTCATATTAAAGATTTTTTTACGTTTAAAAAGACTCGCTTTTTGCTTCAAATTC
TTCACAAAAATGCAGCTTATTACTTGCATTACTTAAGAAAAATAAATAAAATGACAATCATAATAGAGCGAGAAATTTAC
AAATCAATGAAAAACAAAGAATTGGTTCAATTATTGGAATTAGAAAAATCTTTGGTATACTTCTCTACCTCACTAAAATC
TAATGAACTTGTTTTAAACAAAATGGTTAGAACTGCTGGTATAAAGAAGTATCCAGATGATGAAGACCTATTAGAAGATG
TTATAGTTGAAAATAGACAGGCTCTTGATATGGCTAAAATATATGGAGATATATTGAGTAGAATTATGGATGCTTTCAGT
GCAATTATAAGTAATAATCAGAATAATGTTATGCAAATTTTAACAGTAGTTACACTAATTTTCTCAATACCTACAATAAT
ATCAGGATTCTTTGGTATGAATGTCATCAACATGCCATTTTCTAATAACCCAAACGGATTTTGGATAATACTTCTTATTA
CCTCTATAATATGTATAGTGATTACATTTTTCATGTCAAGAAATAAGCTATTATAA

Upstream 100 bases:

>100_bases
AATCAAAACTAATACATATATTCAGTTATATAAATTAGTTAATTAATAGATACTATTAAATGATGAGATTTATATAAAAC
TGAATAAAGGATGTGTTGCC

Downstream 100 bases:

>100_bases
AATATTAATAAAAAAGCCATTAGAATTAATTGATTTACATTTATCCTAATGGCTTTTATATATTTAAATCTATATAATCT
TATAATACTTTTTAACTATC

Product: cations transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MIRYYKTIDSKLEKLSFFEDGCWINLVEPNHSEINEISNLLNIDVESIESALDEEERSRIDVEDNHTLILIDIPVDESDS
NSSHYTTIPLGIILTEEAIVTVCDAQTKILNDFIVGHIKDFFTFKKTRFLLQILHKNAAYYLHYLRKINKMTIIIEREIY
KSMKNKELVQLLELEKSLVYFSTSLKSNELVLNKMVRTAGIKKYPDDEDLLEDVIVENRQALDMAKIYGDILSRIMDAFS
AIISNNQNNVMQILTVVTLIFSIPTIISGFFGMNVINMPFSNNPNGFWIILLITSIICIVITFFMSRNKLL

Sequences:

>Translated_311_residues
MIRYYKTIDSKLEKLSFFEDGCWINLVEPNHSEINEISNLLNIDVESIESALDEEERSRIDVEDNHTLILIDIPVDESDS
NSSHYTTIPLGIILTEEAIVTVCDAQTKILNDFIVGHIKDFFTFKKTRFLLQILHKNAAYYLHYLRKINKMTIIIEREIY
KSMKNKELVQLLELEKSLVYFSTSLKSNELVLNKMVRTAGIKKYPDDEDLLEDVIVENRQALDMAKIYGDILSRIMDAFS
AIISNNQNNVMQILTVVTLIFSIPTIISGFFGMNVINMPFSNNPNGFWIILLITSIICIVITFFMSRNKLL
>Mature_311_residues
MIRYYKTIDSKLEKLSFFEDGCWINLVEPNHSEINEISNLLNIDVESIESALDEEERSRIDVEDNHTLILIDIPVDESDS
NSSHYTTIPLGIILTEEAIVTVCDAQTKILNDFIVGHIKDFFTFKKTRFLLQILHKNAAYYLHYLRKINKMTIIIEREIY
KSMKNKELVQLLELEKSLVYFSTSLKSNELVLNKMVRTAGIKKYPDDEDLLEDVIVENRQALDMAKIYGDILSRIMDAFS
AIISNNQNNVMQILTVVTLIFSIPTIISGFFGMNVINMPFSNNPNGFWIILLITSIICIVITFFMSRNKLL

Specific function: Mediates influx of magnesium ions [H]

COG id: COG0598

COG function: function code P; Mg2+ and Co2+ transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004488
- InterPro:   IPR002523 [H]

Pfam domain/function: PF01544 CorA [H]

EC number: NA

Molecular weight: Translated: 35877; Mature: 35877

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRYYKTIDSKLEKLSFFEDGCWINLVEPNHSEINEISNLLNIDVESIESALDEEERSRI
CCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHCHHHHCCC
DVEDNHTLILIDIPVDESDSNSSHYTTIPLGIILTEEAIVTVCDAQTKILNDFIVGHIKD
CCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
FFTFKKTRFLLQILHKNAAYYLHYLRKINKMTIIIEREIYKSMKNKELVQLLELEKSLVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHHH
FSTSLKSNELVLNKMVRTAGIKKYPDDEDLLEDVIVENRQALDMAKIYGDILSRIMDAFS
HHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AIISNNQNNVMQILTVVTLIFSIPTIISGFFGMNVINMPFSNNPNGFWIILLITSIICIV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEHHHHHHHHHHHH
ITFFMSRNKLL
HHHHHHCCCCC
>Mature Secondary Structure
MIRYYKTIDSKLEKLSFFEDGCWINLVEPNHSEINEISNLLNIDVESIESALDEEERSRI
CCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHCHHHHCCC
DVEDNHTLILIDIPVDESDSNSSHYTTIPLGIILTEEAIVTVCDAQTKILNDFIVGHIKD
CCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
FFTFKKTRFLLQILHKNAAYYLHYLRKINKMTIIIEREIYKSMKNKELVQLLELEKSLVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHHH
FSTSLKSNELVLNKMVRTAGIKKYPDDEDLLEDVIVENRQALDMAKIYGDILSRIMDAFS
HHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AIISNNQNNVMQILTVVTLIFSIPTIISGFFGMNVINMPFSNNPNGFWIILLITSIICIV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEHHHHHHHHHHHH
ITFFMSRNKLL
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]