| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is 126699726
Identifier: 126699726
GI number: 126699726
Start: 2437885
End: 2439279
Strand: Direct
Name: 126699726
Synonym: CD2109
Alternate gene names: NA
Gene position: 2437885-2439279 (Clockwise)
Preceding gene: 126699725
Following gene: 126699728
Centisome position: 56.82
GC content: 25.66
Gene sequence:
>1395_bases ATGGGTATTATTCTTAAGCCAAAACAATTTTATATGACTGTTATAGCTACCATAATTCTCTACTTCTCTCTTAATTACAG TTTCAACATAAAATTTTCTATATGCTTATCTTTTTTAACTATCTTGATATGGGCTGTAGACTCAGTTGAAAAAACTTTTG TTGCATTGTTTTTTGTAATTCTAGCGTTTATATTTAACATTGCACCAATAAAGGTTATTTTACAGTTTTTATTTACAGAA AATTTTTACATAATAATTCTTGCATACATAATTACTAATGCAGTTACAAAAACAGGTGTCGCAAAAATTATTTCTGAGAA GTTAATTTTAAATACTGTAAATACCCCTAAAAAAATGATTCTTTTATCGTATATTTTAGGTATACTTTTAATATTTTTTA TCCCACAACCATTTCCAAGGGTTATTCTTGTATCTGCTTTTTACAAGGAGTTTTTAAAAGAACAACAGATAACTGAAGAT TCAAAATCTATACTTTTATTTAGTATATTTACAGCATCTACCTTTACATCAATGTTTTTTGTAAATGGAGACACTCTTCT AAATTATGTTGTACTAGAACTTGGAAATTGTAATATAAATTGGGGTCAATGGGCTTTTTATATGTCTGTTCCAACTATAA TTACTTGTTTTATAACTTATTTTTTATTTATCTTTGTCTTTAAAAAAGAATTGCATTCAATAAAATTTATTTCTAATGAA AATCTTGAGGGTAATAAACTTCATTTTTCATATTCTAATTTAAAAAAAGAATTTAATTTGCTAAACAAAGAGCAAAAACA CGTATTTTTATGCCTAGGAATAATGTTTTTTATGTTTTTAACTCAGTTCATACATAACATAAACACATTAATTATAATGT CAATTTGTGTACTTCTTTTATTACTAAGAAAAATAGTTGGATTTAGTACTTTAAAAGAAATAAATTGGAAGGTCCTTATT TTTTTTATAGCAGCATTTTCAATTGGAGGAGTGTTAAAGTACTCTGGAGTTGTAGATATAATGGGAAATTATTTGATAAA GTTTATACCAAACTCTTCAGAAATTATTTCAATATTGTTTTTGATAACTCTCACAATAATCTTGAATATATGTCTTGGAA GTGCTGTCACTACATCATCTGTAGTAATACCGTTACTTGGAAGTTTACATATACTAAAGGAAAATAGTGTTACTTTATGT CTATTTGTCTACATTATAGTAAGTATACAGTACATATTACCATTTCATCATGCTACAATAATGGTTGGTCATGGTGAAAA TCTGTATAATAGCAAGGTTATTTTCAAATACGGTTTAACTTTGATTCCTTTAACCTACTTTATAATAATATGTATAACAT TCCCTTGGTGGAAATTTATAGGACTAGAAATCTAA
Upstream 100 bases:
>100_bases TAAATCATAGAATCAATGAATAATCTTTTTATAAAATGTATTCACATTCATTGTATTCACCTCCATTATGATATAATAAA TTATGGAGGTGAATATAAAA
Downstream 100 bases:
>100_bases AAAAGATGAAAATATGAATTAACTTAAGATAATAATGAAATTATTAAAAAGAAAATTCATATTTTCATCTTTTTATATAA GTTCTTGTAAAATTGGACAA
Product: sodium:sulfate symporter
Products: NA
Alternate protein names: SodiumSulfate Symporter
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MGIILKPKQFYMTVIATIILYFSLNYSFNIKFSICLSFLTILIWAVDSVEKTFVALFFVILAFIFNIAPIKVILQFLFTE NFYIIILAYIITNAVTKTGVAKIISEKLILNTVNTPKKMILLSYILGILLIFFIPQPFPRVILVSAFYKEFLKEQQITED SKSILLFSIFTASTFTSMFFVNGDTLLNYVVLELGNCNINWGQWAFYMSVPTIITCFITYFLFIFVFKKELHSIKFISNE NLEGNKLHFSYSNLKKEFNLLNKEQKHVFLCLGIMFFMFLTQFIHNINTLIIMSICVLLLLLRKIVGFSTLKEINWKVLI FFIAAFSIGGVLKYSGVVDIMGNYLIKFIPNSSEIISILFLITLTIILNICLGSAVTTSSVVIPLLGSLHILKENSVTLC LFVYIIVSIQYILPFHHATIMVGHGENLYNSKVIFKYGLTLIPLTYFIIICITFPWWKFIGLEI
Sequences:
>Translated_464_residues MGIILKPKQFYMTVIATIILYFSLNYSFNIKFSICLSFLTILIWAVDSVEKTFVALFFVILAFIFNIAPIKVILQFLFTE NFYIIILAYIITNAVTKTGVAKIISEKLILNTVNTPKKMILLSYILGILLIFFIPQPFPRVILVSAFYKEFLKEQQITED SKSILLFSIFTASTFTSMFFVNGDTLLNYVVLELGNCNINWGQWAFYMSVPTIITCFITYFLFIFVFKKELHSIKFISNE NLEGNKLHFSYSNLKKEFNLLNKEQKHVFLCLGIMFFMFLTQFIHNINTLIIMSICVLLLLLRKIVGFSTLKEINWKVLI FFIAAFSIGGVLKYSGVVDIMGNYLIKFIPNSSEIISILFLITLTIILNICLGSAVTTSSVVIPLLGSLHILKENSVTLC LFVYIIVSIQYILPFHHATIMVGHGENLYNSKVIFKYGLTLIPLTYFIIICITFPWWKFIGLEI >Mature_463_residues GIILKPKQFYMTVIATIILYFSLNYSFNIKFSICLSFLTILIWAVDSVEKTFVALFFVILAFIFNIAPIKVILQFLFTEN FYIIILAYIITNAVTKTGVAKIISEKLILNTVNTPKKMILLSYILGILLIFFIPQPFPRVILVSAFYKEFLKEQQITEDS KSILLFSIFTASTFTSMFFVNGDTLLNYVVLELGNCNINWGQWAFYMSVPTIITCFITYFLFIFVFKKELHSIKFISNEN LEGNKLHFSYSNLKKEFNLLNKEQKHVFLCLGIMFFMFLTQFIHNINTLIIMSICVLLLLLRKIVGFSTLKEINWKVLIF FIAAFSIGGVLKYSGVVDIMGNYLIKFIPNSSEIISILFLITLTIILNICLGSAVTTSSVVIPLLGSLHILKENSVTLCL FVYIIVSIQYILPFHHATIMVGHGENLYNSKVIFKYGLTLIPLTYFIIICITFPWWKFIGLEI
Specific function: Unknown
COG id: COG0471
COG function: function code P; Di- and tricarboxylate transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53277; Mature: 53146
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIILKPKQFYMTVIATIILYFSLNYSFNIKFSICLSFLTILIWAVDSVEKTFVALFFVI CCEEECHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAFIFNIAPIKVILQFLFTENFYIIILAYIITNAVTKTGVAKIISEKLILNTVNTPKKMI HHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LLSYILGILLIFFIPQPFPRVILVSAFYKEFLKEQQITEDSKSILLFSIFTASTFTSMFF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHEE VNGDTLLNYVVLELGNCNINWGQWAFYMSVPTIITCFITYFLFIFVFKKELHSIKFISNE ECCHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC NLEGNKLHFSYSNLKKEFNLLNKEQKHVFLCLGIMFFMFLTQFIHNINTLIIMSICVLLL CCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRKIVGFSTLKEINWKVLIFFIAAFSIGGVLKYSGVVDIMGNYLIKFIPNSSEIISILF HHHHHHCHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHH LITLTIILNICLGSAVTTSSVVIPLLGSLHILKENSVTLCLFVYIIVSIQYILPFHHATI HHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEE MVGHGENLYNSKVIFKYGLTLIPLTYFIIICITFPWWKFIGLEI EEECCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GIILKPKQFYMTVIATIILYFSLNYSFNIKFSICLSFLTILIWAVDSVEKTFVALFFVI CEEECHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAFIFNIAPIKVILQFLFTENFYIIILAYIITNAVTKTGVAKIISEKLILNTVNTPKKMI HHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LLSYILGILLIFFIPQPFPRVILVSAFYKEFLKEQQITEDSKSILLFSIFTASTFTSMFF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHEE VNGDTLLNYVVLELGNCNINWGQWAFYMSVPTIITCFITYFLFIFVFKKELHSIKFISNE ECCHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC NLEGNKLHFSYSNLKKEFNLLNKEQKHVFLCLGIMFFMFLTQFIHNINTLIIMSICVLLL CCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRKIVGFSTLKEINWKVLIFFIAAFSIGGVLKYSGVVDIMGNYLIKFIPNSSEIISILF HHHHHHCHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHH LITLTIILNICLGSAVTTSSVVIPLLGSLHILKENSVTLCLFVYIIVSIQYILPFHHATI HHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEE MVGHGENLYNSKVIFKYGLTLIPLTYFIIICITFPWWKFIGLEI EEECCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA