| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is yozG [H]
Identifier: 126699662
GI number: 126699662
Start: 2357797
End: 2358012
Strand: Direct
Name: yozG [H]
Synonym: CD2045
Alternate gene names: 126699662
Gene position: 2357797-2358012 (Clockwise)
Preceding gene: 126699661
Following gene: 126699668
Centisome position: 54.96
GC content: 28.24
Gene sequence:
>216_bases ATGGCAATAGTAGTTAACCTAGATGTAATGATGGCAAAAAGAAAAATATCACTTAAAGAATTGGCAGAAAAAATAGATAT TACAAATGCAAATTTATCAATTTTAAAAACTGGAAAAGCAAAAGCTATTAGATTTACCACTCTAAACGAAATTTGCAAAG CTTTAGACTGTCAGCCAGGTGATATACTTGAATATGTAGAAGATGAAAATGATTAA
Upstream 100 bases:
>100_bases TCTTTTATATTTGCACTAATGTGCTTTGTAATTGCAGAAACATTTGATAAAGCTATAAAAATAAAAGAAGATAATGATTT AACGATATAGAGGTGATGTT
Downstream 100 bases:
>100_bases AAAAGAGTGTTTAGAAACACTCTTTTTTATTATACTATATGATTTTTATTCTTTTACTATATTATTGACATTAATATTAA CTTTGTTTAAAGTCATAACA
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MAIVVNLDVMMAKRKISLKELAEKIDITNANLSILKTGKAKAIRFTTLNEICKALDCQPGDILEYVEDEND
Sequences:
>Translated_71_residues MAIVVNLDVMMAKRKISLKELAEKIDITNANLSILKTGKAKAIRFTTLNEICKALDCQPGDILEYVEDEND >Mature_70_residues AIVVNLDVMMAKRKISLKELAEKIDITNANLSILKTGKAKAIRFTTLNEICKALDCQPGDILEYVEDEND
Specific function: Unknown
COG id: COG3655
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001387 - InterPro: IPR010982 [H]
Pfam domain/function: PF01381 HTH_3 [H]
EC number: NA
Molecular weight: Translated: 7924; Mature: 7793
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIVVNLDVMMAKRKISLKELAEKIDITNANLSILKTGKAKAIRFTTLNEICKALDCQPG CEEEEEHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCEEEEECHHHHHHHHCCCCC DILEYVEDEND CHHHHHCCCCC >Mature Secondary Structure AIVVNLDVMMAKRKISLKELAEKIDITNANLSILKTGKAKAIRFTTLNEICKALDCQPG EEEEEHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCEEEEECHHHHHHHHCCCCC DILEYVEDEND CHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]