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The map label for this gene is racX [H]

Identifier: 126699645

GI number: 126699645

Start: 2339768

End: 2340466

Strand: Direct

Name: racX [H]

Synonym: CD2028

Alternate gene names: 126699645

Gene position: 2339768-2340466 (Clockwise)

Preceding gene: 126699644

Following gene: 126699657

Centisome position: 54.54

GC content: 26.04

Gene sequence:

>699_bases
ATGAATGAAAAATTAATTGGTATTTTGGCTGGAATGGGTCCAAGGTCAACAGCCCCTTTTGTTGATTTAATTATTGATGA
GTGTCAATCTCAATATGGAGCAAAATATGATGATGAATTTCCAAAGATGATGATATATTCATTACCTACCCCATTTTATA
TTGACCGTCCAATAAATCATGACCTTATGAAAGAAACTATAATTGATGGATTACAAAAGCTTGAATCAACTGGTGTAAAT
TTTATTGCAATGCCATGCAATTCAGCACATATATACTTTAAAGAATTAAAAGAGTCTATTAATATACCAATATTAAATAT
TGTAGAAGAAACAGTTAAAAAATTACCTACTATCTCACAAAAAGTAACTCTTTTTTCGACTAGTTCAACTTTTGAGTCTA
CAATTTACCAGAATGGTATAATACATAATGGACATGAATTTATATTTAAAGATGAATGGCAAATAAAATTAAACAATCTT
ATTCAAAATATAAAAATGGATAAAGAAAATCCACACAATATTGATATTTGGAATAAACTTATTGAAGATGTTAAAAATGA
ATCTATAGAAAATATAGTAATTGCTTGTACTGATTTAAATGTAGTTTTAGAAAAATCATATCCTTCAATAAATATTGTTG
ATTCATCAAAATGCTTGGCTGAATCAGTTGTCAATAAATATCTAAAATTAGTTAAATAA

Upstream 100 bases:

>100_bases
TATAAGTGTACAATATAATCTATTATAAAATATAATTTTATGCTTTTATAGATTTTTATTTTATACATAAATATATTTAT
ATATAAAGGAGATAATTTTT

Downstream 100 bases:

>100_bases
ATTTTTCATACACTATATTATAAAAAATATATGTTATAAGTTTATTTTAAATAGTATAGACTTATAACATATATCATAGT
TTCTTGACAATATAGAAATT

Product: amino acid racemase

Products: D-aspartate

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MNEKLIGILAGMGPRSTAPFVDLIIDECQSQYGAKYDDEFPKMMIYSLPTPFYIDRPINHDLMKETIIDGLQKLESTGVN
FIAMPCNSAHIYFKELKESINIPILNIVEETVKKLPTISQKVTLFSTSSTFESTIYQNGIIHNGHEFIFKDEWQIKLNNL
IQNIKMDKENPHNIDIWNKLIEDVKNESIENIVIACTDLNVVLEKSYPSINIVDSSKCLAESVVNKYLKLVK

Sequences:

>Translated_232_residues
MNEKLIGILAGMGPRSTAPFVDLIIDECQSQYGAKYDDEFPKMMIYSLPTPFYIDRPINHDLMKETIIDGLQKLESTGVN
FIAMPCNSAHIYFKELKESINIPILNIVEETVKKLPTISQKVTLFSTSSTFESTIYQNGIIHNGHEFIFKDEWQIKLNNL
IQNIKMDKENPHNIDIWNKLIEDVKNESIENIVIACTDLNVVLEKSYPSINIVDSSKCLAESVVNKYLKLVK
>Mature_232_residues
MNEKLIGILAGMGPRSTAPFVDLIIDECQSQYGAKYDDEFPKMMIYSLPTPFYIDRPINHDLMKETIIDGLQKLESTGVN
FIAMPCNSAHIYFKELKESINIPILNIVEETVKKLPTISQKVTLFSTSSTFESTIYQNGIIHNGHEFIFKDEWQIKLNNL
IQNIKMDKENPHNIDIWNKLIEDVKNESIENIVIACTDLNVVLEKSYPSINIVDSSKCLAESVVNKYLKLVK

Specific function: Probable aspartate or glutamate racemase involved in peptidoglycan modification during cortex synthesis [H]

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: 5.1.1.13

Molecular weight: Translated: 26488; Mature: 26488

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKLIGILAGMGPRSTAPFVDLIIDECQSQYGAKYDDEFPKMMIYSLPTPFYIDRPINH
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEECCCCCH
DLMKETIIDGLQKLESTGVNFIAMPCNSAHIYFKELKESINIPILNIVEETVKKLPTISQ
HHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
KVTLFSTSSTFESTIYQNGIIHNGHEFIFKDEWQIKLNNLIQNIKMDKENPHNIDIWNKL
EEEEEECCCHHHHHHHHCCCEECCCEEEECCCCEEHHHHHHHHHCCCCCCCCCHHHHHHH
IEDVKNESIENIVIACTDLNVVLEKSYPSINIVDSSKCLAESVVNKYLKLVK
HHHHHCCCCCEEEEEEECCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNEKLIGILAGMGPRSTAPFVDLIIDECQSQYGAKYDDEFPKMMIYSLPTPFYIDRPINH
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEECCCCCH
DLMKETIIDGLQKLESTGVNFIAMPCNSAHIYFKELKESINIPILNIVEETVKKLPTISQ
HHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
KVTLFSTSSTFESTIYQNGIIHNGHEFIFKDEWQIKLNNLIQNIKMDKENPHNIDIWNKL
EEEEEECCCHHHHHHHHCCCEECCCEEEECCCCEEHHHHHHHHHCCCCCCCCCHHHHHHH
IEDVKNESIENIVIACTDLNVVLEKSYPSINIVDSSKCLAESVVNKYLKLVK
HHHHHCCCCCEEEEEEECCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-aspartate

Specific reaction: L-aspartate = D-aspartate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491712; 9384377 [H]