Click here to switch to the map view.

The map label for this gene is 126699538

Identifier: 126699538

GI number: 126699538

Start: 2227347

End: 2227979

Strand: Direct

Name: 126699538

Synonym: CD1929

Alternate gene names: NA

Gene position: 2227347-2227979 (Clockwise)

Preceding gene: 126699537

Following gene: 126699539

Centisome position: 51.92

GC content: 29.23

Gene sequence:

>633_bases
ATGAATAATAAATATAGAAGAACTGTTAACAGAGAATTTGAAAAGAGTAGCTTTTGGCCAACATTTACAGATTTATTATC
TACTGTATTGATGGTTGTAATTCTTATCTTATTTAGCTCAGAAAGTATTTCAGGTTCTGTTGAACAAGATTTAGCTAAGA
ATGTCAATGCTTCTGTTGAAGAAACTTTTAAAAAAAGTGGAATACCTGTGAAGGTAGATAAATCTAATGGGCAAGTAACT
TTTGGTGAAAAAACCATGTTTGATGTAGATAGTGATGTTTTAAAACCAGAGGCTAAAGAAATGCTAAAAATGTTTGTTCC
AAAGTACATAGAGACTATTTATAAAGATTATGGTGACTATATATCCAAAATAGTTATAGAAGGTCATACAGATGATGTGG
GAAGTTATATATACAACTTAGATTTATCACAAAGAAGAGCATATAGCGTTGCTAAATTTATAGTTGGAGATGAAATAGGT
GACTATAAATACAAAGATAAAGTGACTAAGCATATTATTGCAATAGGAAGGTCAAAAGCTGAACTCATCAAAAATGGTGA
CAATAGCGTGAATAGAGATGCATCTAGAAGAGTAGAACTAAAATACGAAATAAATATTAATCAAAATAAATAA

Upstream 100 bases:

>100_bases
TTATTTAAGGATGATGTTAATAATGTATTTAATCCTTTTAGTGAAGAAATTTATGAGATAGAGGATAAAGAAATAAAGGT
CATAGGTGAGGATGAGTTAA

Downstream 100 bases:

>100_bases
TTAAATTTTTATAAAAAAAAAGAAGGCAGTTGGTGTGAGCTTTAAGCCTTCTTTAAGGAAAAAGTTTATTTATTTTTGTT
GATACTTAACATATTATAGT

Product: hypothetical protein

Products: NA

Alternate protein names: OmpA/MotB Domain Protein; Periplasmic Protein; Ompa/Motb Domain Protein; OmpA/MotB Domain-Containing Protein; OmpA Family Protein

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MNNKYRRTVNREFEKSSFWPTFTDLLSTVLMVVILILFSSESISGSVEQDLAKNVNASVEETFKKSGIPVKVDKSNGQVT
FGEKTMFDVDSDVLKPEAKEMLKMFVPKYIETIYKDYGDYISKIVIEGHTDDVGSYIYNLDLSQRRAYSVAKFIVGDEIG
DYKYKDKVTKHIIAIGRSKAELIKNGDNSVNRDASRRVELKYEININQNK

Sequences:

>Translated_210_residues
MNNKYRRTVNREFEKSSFWPTFTDLLSTVLMVVILILFSSESISGSVEQDLAKNVNASVEETFKKSGIPVKVDKSNGQVT
FGEKTMFDVDSDVLKPEAKEMLKMFVPKYIETIYKDYGDYISKIVIEGHTDDVGSYIYNLDLSQRRAYSVAKFIVGDEIG
DYKYKDKVTKHIIAIGRSKAELIKNGDNSVNRDASRRVELKYEININQNK
>Mature_210_residues
MNNKYRRTVNREFEKSSFWPTFTDLLSTVLMVVILILFSSESISGSVEQDLAKNVNASVEETFKKSGIPVKVDKSNGQVT
FGEKTMFDVDSDVLKPEAKEMLKMFVPKYIETIYKDYGDYISKIVIEGHTDDVGSYIYNLDLSQRRAYSVAKFIVGDEIG
DYKYKDKVTKHIIAIGRSKAELIKNGDNSVNRDASRRVELKYEININQNK

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24010; Mature: 24010

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKYRRTVNREFEKSSFWPTFTDLLSTVLMVVILILFSSESISGSVEQDLAKNVNASVE
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHH
ETFKKSGIPVKVDKSNGQVTFGEKTMFDVDSDVLKPEAKEMLKMFVPKYIETIYKDYGDY
HHHHHCCCCEEEECCCCEEEECCCEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ISKIVIEGHTDDVGSYIYNLDLSQRRAYSVAKFIVGDEIGDYKYKDKVTKHIIAIGRSKA
HHHHHHCCCCCCHHHHEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHH
ELIKNGDNSVNRDASRRVELKYEININQNK
HHHHCCCCCCCCCCCCEEEEEEEEECCCCC
>Mature Secondary Structure
MNNKYRRTVNREFEKSSFWPTFTDLLSTVLMVVILILFSSESISGSVEQDLAKNVNASVE
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHH
ETFKKSGIPVKVDKSNGQVTFGEKTMFDVDSDVLKPEAKEMLKMFVPKYIETIYKDYGDY
HHHHHCCCCEEEECCCCEEEECCCEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ISKIVIEGHTDDVGSYIYNLDLSQRRAYSVAKFIVGDEIGDYKYKDKVTKHIIAIGRSKA
HHHHHHCCCCCCHHHHEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHH
ELIKNGDNSVNRDASRRVELKYEININQNK
HHHHCCCCCCCCCCCCEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA