Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699505

Identifier: 126699505

GI number: 126699505

Start: 2199802

End: 2200185

Strand: Direct

Name: 126699505

Synonym: CD1895

Alternate gene names: NA

Gene position: 2199802-2200185 (Clockwise)

Preceding gene: 126699504

Following gene: 126699506

Centisome position: 51.27

GC content: 30.73

Gene sequence:

>384_bases
ATGAATCTATCGAAGAAAATAGAAGATAAAAGAAAAGCTAAACAGAGAGCTGAAAAAGTTAAGAAAGCTAAAATTGCTAC
AGCTGGTGTGGTATTAGGAGCTGTTACTGGTGCAGTGAGTGGAGTACTTTTGGCTCCTAAATCTGGAAAAGAAACAAGAG
AGGATATAAAAGATGCTTCACAACAAATTGCTGAAAAGATAAATATGAAAACTGTAGATGTAAAAGGCAAAGTATCTGAG
AAGCTAGAGGATAAAAAAGGAAACTTTATAGAATCAAAGAAAAAAATAAAAAAATATATAGATAACAAAAAGAGTGTTGA
AAATTCTAGTGAGGAAGATAAAATAATAGATATAGTTGAACCAGTTAGTGTTACTGAGGAATAA

Upstream 100 bases:

>100_bases
GAATTTTTATTGATTTTTAAAAATTTAGTTAGAAACTATATCATTATGGTAAAAAATGTATTATAATGTTTAGAAATATT
ATAATAAGGAGCGATTAAAC

Downstream 100 bases:

>100_bases
TATGGACAATACAATAACGATTAACATAAGTATAATATATGTATTATTAGCTATACTTGCTTGTATTGCTTTAGTTTATT
TAATTATTGTACTTGTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MNLSKKIEDKRKAKQRAEKVKKAKIATAGVVLGAVTGAVSGVLLAPKSGKETREDIKDASQQIAEKINMKTVDVKGKVSE
KLEDKKGNFIESKKKIKKYIDNKKSVENSSEEDKIIDIVEPVSVTEE

Sequences:

>Translated_127_residues
MNLSKKIEDKRKAKQRAEKVKKAKIATAGVVLGAVTGAVSGVLLAPKSGKETREDIKDASQQIAEKINMKTVDVKGKVSE
KLEDKKGNFIESKKKIKKYIDNKKSVENSSEEDKIIDIVEPVSVTEE
>Mature_127_residues
MNLSKKIEDKRKAKQRAEKVKKAKIATAGVVLGAVTGAVSGVLLAPKSGKETREDIKDASQQIAEKINMKTVDVKGKVSE
KLEDKKGNFIESKKKIKKYIDNKKSVENSSEEDKIIDIVEPVSVTEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13983; Mature: 13983

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSKKIEDKRKAKQRAEKVKKAKIATAGVVLGAVTGAVSGVLLAPKSGKETREDIKDAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHH
QQIAEKINMKTVDVKGKVSEKLEDKKGNFIESKKKIKKYIDNKKSVENSSEEDKIIDIVE
HHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHC
PVSVTEE
CCCCCCC
>Mature Secondary Structure
MNLSKKIEDKRKAKQRAEKVKKAKIATAGVVLGAVTGAVSGVLLAPKSGKETREDIKDAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHH
QQIAEKINMKTVDVKGKVSEKLEDKKGNFIESKKKIKKYIDNKKSVENSSEEDKIIDIVE
HHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHC
PVSVTEE
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA