Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699474

Identifier: 126699474

GI number: 126699474

Start: 2164829

End: 2165506

Strand: Direct

Name: 126699474

Synonym: CD1863

Alternate gene names: NA

Gene position: 2164829-2165506 (Clockwise)

Preceding gene: 126699473

Following gene: 126699475

Centisome position: 50.46

GC content: 34.81

Gene sequence:

>678_bases
ATGAAAGGAGATAAAAACATGGATTACAAAACAATGAGAAATCAAATAGAAGATATGGTAAATGATAACCATAAGGACTT
TGTAAAGGCGATTATAAGCATGGAAAAAGGTATCAATGATGAAAGTGCTTTAGACAAGCTCTATGACGCTTATATGGACA
ATGACAGCCTTAATTTACTGCATGAGGAATTTGACTATATGATTGAGGATTTAAGAGAACAGGGGCAGATAAAAGACCTG
CCTTATGTTCAGGAAGAAAAGGATAATCTTATCAATATTGTCGGAAATATTGTTGGAGAGGTCGATGTAGTTGAAAGAGA
AAACAAGAATGGAGACTCCTTTAAGGTGGCAAATTTCTCTGTAGTATCCAAAGATGATGAAGGAAATAAGGTATATCATA
ATTGCTCTGCCTATGGAGAAAAGAGTGATATTCCAAAGGGCTTTAAGCAAGGAGATTTTGTTAAGCTCTTTGGACAAATC
AGAACCTCAATTGATGATAATGGTAAGGAGCATAGCAATGTAAGGATACTTTCTTCAAAGCTTTTAAAGGCAAAAGAACA
AATGAAAGGACAGGATGAAAAGAAAGGATCTGTACTTGGAGCTATCAAAAAATATCAGGCTGAAGATAAGGAAAAACCGA
AAGAAAAGAAAGAAGCAAGCAAAGAAGCTGAGAGATAA

Upstream 100 bases:

>100_bases
TCAGATACGAGCTTATCAAAATGAAAGTAAAACAGAAGAAAAACAAAAAACAAAAGAACAGGAAATTTTAAGATAAGGGG
AGGGCAACCTCTCTTTTGCC

Downstream 100 bases:

>100_bases
ATTTACGGTCGGTGTGGTCTTAGGACTGCACCGGCTCTTTTTTATTTATGCAAGTTCGATTAAAGAGAATATATTTATGA
AAAAAGTGTATTTTGTGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKGDKNMDYKTMRNQIEDMVNDNHKDFVKAIISMEKGINDESALDKLYDAYMDNDSLNLLHEEFDYMIEDLREQGQIKDL
PYVQEEKDNLINIVGNIVGEVDVVERENKNGDSFKVANFSVVSKDDEGNKVYHNCSAYGEKSDIPKGFKQGDFVKLFGQI
RTSIDDNGKEHSNVRILSSKLLKAKEQMKGQDEKKGSVLGAIKKYQAEDKEKPKEKKEASKEAER

Sequences:

>Translated_225_residues
MKGDKNMDYKTMRNQIEDMVNDNHKDFVKAIISMEKGINDESALDKLYDAYMDNDSLNLLHEEFDYMIEDLREQGQIKDL
PYVQEEKDNLINIVGNIVGEVDVVERENKNGDSFKVANFSVVSKDDEGNKVYHNCSAYGEKSDIPKGFKQGDFVKLFGQI
RTSIDDNGKEHSNVRILSSKLLKAKEQMKGQDEKKGSVLGAIKKYQAEDKEKPKEKKEASKEAER
>Mature_225_residues
MKGDKNMDYKTMRNQIEDMVNDNHKDFVKAIISMEKGINDESALDKLYDAYMDNDSLNLLHEEFDYMIEDLREQGQIKDL
PYVQEEKDNLINIVGNIVGEVDVVERENKNGDSFKVANFSVVSKDDEGNKVYHNCSAYGEKSDIPKGFKQGDFVKLFGQI
RTSIDDNGKEHSNVRILSSKLLKAKEQMKGQDEKKGSVLGAIKKYQAEDKEKPKEKKEASKEAER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25740; Mature: 25740

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGDKNMDYKTMRNQIEDMVNDNHKDFVKAIISMEKGINDESALDKLYDAYMDNDSLNLL
CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH
HEEFDYMIEDLREQGQIKDLPYVQEEKDNLINIVGNIVGEVDVVERENKNGDSFKVANFS
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEEE
VVSKDDEGNKVYHNCSAYGEKSDIPKGFKQGDFVKLFGQIRTSIDDNGKEHSNVRILSSK
EEECCCCCCCEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LLKAKEQMKGQDEKKGSVLGAIKKYQAEDKEKPKEKKEASKEAER
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKGDKNMDYKTMRNQIEDMVNDNHKDFVKAIISMEKGINDESALDKLYDAYMDNDSLNLL
CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH
HEEFDYMIEDLREQGQIKDLPYVQEEKDNLINIVGNIVGEVDVVERENKNGDSFKVANFS
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEEE
VVSKDDEGNKVYHNCSAYGEKSDIPKGFKQGDFVKLFGQIRTSIDDNGKEHSNVRILSSK
EEECCCCCCCEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LLKAKEQMKGQDEKKGSVLGAIKKYQAEDKEKPKEKKEASKEAER
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA