Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is ytfP [H]

Identifier: 126699423

GI number: 126699423

Start: 2097550

End: 2098803

Strand: Direct

Name: ytfP [H]

Synonym: CD1815

Alternate gene names: 126699423

Gene position: 2097550-2098803 (Clockwise)

Preceding gene: 126699422

Following gene: 126699424

Centisome position: 48.89

GC content: 28.15

Gene sequence:

>1254_bases
ATGAGTAAAGTTATAGTAGTTGGTGGAGGAGCTTCTGGAATGATGGCAGCTTTGTCAGCTTCAAAAAACAATAATGAAGT
AATATTAGTTGAGAGAAATGGAGAATTAGGAAGAAAACTTAGGGCAACTGGTGGCGGTAGATGCAATTTTACCAATAATA
GAGAGATAGAAGATTTTTTTGATAAAGTTGTCAGTAATAAAAAATTTCTCTATAGTAGTTTTTATACATTTACAAATAAA
GACCTTATTTCGTATTTTGAAAGTAGAAATTTGGAATATAAGATTGAAGAAGAAAATGACCACAAAGTATACACTAAAAA
TGATAAATCTATAGAAGTAATAGAAGTATTAAATAAAGATTTACTCAATCACAATGTAAAGATAATGTATAATAAGAAAG
TTATAGATATTATAACTGAAGAAATTGCTCTAAAAGATGATTCTAATAAGGACAAGTCAAAGTATCTAATAAAAGGGATT
ATTTTAGATAATGGAGATAAAATACTAGGAGACAAGGTTATTATATCAACTGGAGGAGTGAGTTATTCAAAGACGGGTTC
AGATGGTTCAATGTATAAGATTCTTAAAAAGCATGGACATACATTAAACAAACTATATCCTGCTTTAGTTCCACTTACAA
TAGAGGAAAAATGGATTAAAGATTTACAAGGAATATCCATGAAGAATGTGGAAATATCTTGTAAGATTAAGAAAAGGAAA
ATATCAAAATCTGGAGACATGCTATTTGCCCATTTTGGGATAACAGGACCTTGTGTTCTTATAATGTCTTCTTATATTAA
CAAGATTATTGAAAAGGAAAAGGTAGAATTAAATATAGATTTCTTACCAAATTTAAGTACTGATGAAATCTCTAGTATAA
TCAGAGCATTTCCAAATAAAAATGTTCTAAATAATCTTAAGCAAATACTACCTCAAAATTTCTTAAAAGAGATTTTTTCT
CTATTATCTTTAGTTGATAAAAAGGCAAGTGATTTGTCTAAGGCAGATGAAATTAGAATTATTGAGTATATAAAAAATAT
GAAGCTAACTTGTAATGGGACTACAGGTATAAACACTGGTATGGTTACTTCTGGTGGTATTTCAGTTAAAGAAATTAATT
CTTCTACTATGGAATCTAAATTAGTTAAGAACTTATTTTTTACAGGTGAAGTAATTGATATAGATGCAGAAACTGGTGGA
TATAATTTACAAATAGCATTTTCAACTGGATATCTTGCGGGTATAAGTGTATAA

Upstream 100 bases:

>100_bases
GGCCTGTTATAGTAAAAATGAATGATACAAGTCATATAAAAAATCATGTAAAGATAAATAATTCTGCACTGGAGTAGGAA
TCAATTATAAGGAGAAATTT

Downstream 100 bases:

>100_bases
ATATAATTTTTTAATAATTAAATATGAATAAATAGAGGTGTATATATGGGTAATTTAGTTATAGCTGTAGATGGTCCAGC
AGGAGCTGGAAAAAGTACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MSKVIVVGGGASGMMAALSASKNNNEVILVERNGELGRKLRATGGGRCNFTNNREIEDFFDKVVSNKKFLYSSFYTFTNK
DLISYFESRNLEYKIEEENDHKVYTKNDKSIEVIEVLNKDLLNHNVKIMYNKKVIDIITEEIALKDDSNKDKSKYLIKGI
ILDNGDKILGDKVIISTGGVSYSKTGSDGSMYKILKKHGHTLNKLYPALVPLTIEEKWIKDLQGISMKNVEISCKIKKRK
ISKSGDMLFAHFGITGPCVLIMSSYINKIIEKEKVELNIDFLPNLSTDEISSIIRAFPNKNVLNNLKQILPQNFLKEIFS
LLSLVDKKASDLSKADEIRIIEYIKNMKLTCNGTTGINTGMVTSGGISVKEINSSTMESKLVKNLFFTGEVIDIDAETGG
YNLQIAFSTGYLAGISV

Sequences:

>Translated_417_residues
MSKVIVVGGGASGMMAALSASKNNNEVILVERNGELGRKLRATGGGRCNFTNNREIEDFFDKVVSNKKFLYSSFYTFTNK
DLISYFESRNLEYKIEEENDHKVYTKNDKSIEVIEVLNKDLLNHNVKIMYNKKVIDIITEEIALKDDSNKDKSKYLIKGI
ILDNGDKILGDKVIISTGGVSYSKTGSDGSMYKILKKHGHTLNKLYPALVPLTIEEKWIKDLQGISMKNVEISCKIKKRK
ISKSGDMLFAHFGITGPCVLIMSSYINKIIEKEKVELNIDFLPNLSTDEISSIIRAFPNKNVLNNLKQILPQNFLKEIFS
LLSLVDKKASDLSKADEIRIIEYIKNMKLTCNGTTGINTGMVTSGGISVKEINSSTMESKLVKNLFFTGEVIDIDAETGG
YNLQIAFSTGYLAGISV
>Mature_416_residues
SKVIVVGGGASGMMAALSASKNNNEVILVERNGELGRKLRATGGGRCNFTNNREIEDFFDKVVSNKKFLYSSFYTFTNKD
LISYFESRNLEYKIEEENDHKVYTKNDKSIEVIEVLNKDLLNHNVKIMYNKKVIDIITEEIALKDDSNKDKSKYLIKGII
LDNGDKILGDKVIISTGGVSYSKTGSDGSMYKILKKHGHTLNKLYPALVPLTIEEKWIKDLQGISMKNVEISCKIKKRKI
SKSGDMLFAHFGITGPCVLIMSSYINKIIEKEKVELNIDFLPNLSTDEISSIIRAFPNKNVLNNLKQILPQNFLKEIFSL
LSLVDKKASDLSKADEIRIIEYIKNMKLTCNGTTGINTGMVTSGGISVKEINSSTMESKLVKNLFFTGEVIDIDAETGGY
NLQIAFSTGYLAGISV

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367234, Length=401, Percent_Identity=27.6807980049875, Blast_Score=158, Evalue=5e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 46514; Mature: 46383

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVIVVGGGASGMMAALSASKNNNEVILVERNGELGRKLRATGGGRCNFTNNREIEDFF
CCEEEEEECCCHHHHHHHCCCCCCCEEEEEECCCCCCCEEECCCCCEECCCCCCCHHHHH
DKVVSNKKFLYSSFYTFTNKDLISYFESRNLEYKIEEENDHKVYTKNDKSIEVIEVLNKD
HHHHCCCEEEEEHHHHHCCHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCHHHHHHHHH
LLNHNVKIMYNKKVIDIITEEIALKDDSNKDKSKYLIKGIILDNGDKILGDKVIISTGGV
HHCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCEEECCEEEEEECCC
SYSKTGSDGSMYKILKKHGHTLNKLYPALVPLTIEEKWIKDLQGISMKNVEISCKIKKRK
EECCCCCCCHHHHHHHHCCCHHHHHHHHHEEEEECHHHHHHHCCCEEECEEEEEEEEEEE
ISKSGDMLFAHFGITGPCVLIMSSYINKIIEKEKVELNIDFLPNLSTDEISSIIRAFPNK
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHCCCC
NVLNNLKQILPQNFLKEIFSLLSLVDKKASDLSKADEIRIIEYIKNMKLTCNGTTGINTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEECCCCCCCCC
MVTSGGISVKEINSSTMESKLVKNLFFTGEVIDIDAETGGYNLQIAFSTGYLAGISV
CEECCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCEEEECCC
>Mature Secondary Structure 
SKVIVVGGGASGMMAALSASKNNNEVILVERNGELGRKLRATGGGRCNFTNNREIEDFF
CEEEEEECCCHHHHHHHCCCCCCCEEEEEECCCCCCCEEECCCCCEECCCCCCCHHHHH
DKVVSNKKFLYSSFYTFTNKDLISYFESRNLEYKIEEENDHKVYTKNDKSIEVIEVLNKD
HHHHCCCEEEEEHHHHHCCHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCHHHHHHHHH
LLNHNVKIMYNKKVIDIITEEIALKDDSNKDKSKYLIKGIILDNGDKILGDKVIISTGGV
HHCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCEEECCEEEEEECCC
SYSKTGSDGSMYKILKKHGHTLNKLYPALVPLTIEEKWIKDLQGISMKNVEISCKIKKRK
EECCCCCCCHHHHHHHHCCCHHHHHHHHHEEEEECHHHHHHHCCCEEECEEEEEEEEEEE
ISKSGDMLFAHFGITGPCVLIMSSYINKIIEKEKVELNIDFLPNLSTDEISSIIRAFPNK
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHCCCC
NVLNNLKQILPQNFLKEIFSLLSLVDKKASDLSKADEIRIIEYIKNMKLTCNGTTGINTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEECCCCCCCCC
MVTSGGISVKEINSSTMESKLVKNLFFTGEVIDIDAETGGYNLQIAFSTGYLAGISV
CEECCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]