| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699411
Identifier: 126699411
GI number: 126699411
Start: 2083078
End: 2083968
Strand: Direct
Name: 126699411
Synonym: CD1802
Alternate gene names: NA
Gene position: 2083078-2083968 (Clockwise)
Preceding gene: 126699407
Following gene: 126699412
Centisome position: 48.55
GC content: 28.51
Gene sequence:
>891_bases ATGGCTAAATTAACTCTAGAACATATAAAAGGAAATACATATTATATTCCACTCCCTACAATAGTAGGTGTATACGTAGA TGGTAAGGATGCAATTTTAATTGACAGTGGAAATAATAAGGATACAGCTAGACAAGTTTTAAGATTATTAGAAGAACATA ATTTAAATCCTAAATTAATAATAAACACTCATTCAAATGCAGACCATATAGGAGGAAATGCATATTTGAAGAATCAAACA AAATGCAAGATTGCTACGACTAAAATTGAAGGATATTTTACAGAAAATCCAATATTAGAATCAGCATTTTTATATGGTGG CTATCCAAGTAAAGCACTGAAGAATAAATTTTTATTAGCAAAGGAAAGTGAAGTTGATTATATTATCCCTTCAAATGGCA AAATTGTAGATACAGAACTTGAAGCGATTTCTCTTCCAGGTCATTATTTTGAAATGATTGGTGTTAGAACTCCAGATAAT GTTTTGTTTGTTGCAGATAGTCTTACACCAGAGAATATAATTACTAAATATCATTTTTTCTTCCTACTGGATATAGATTC ACAGTTTAAGACACTAGAAAAATTGAGAATGTTAGAGGCTGATTTCTTTGTTCCAAGTCACTCTGTCAAAACTACAGATA TAAAAAGTTTAATTAATATTAATAAGAAGAAGATGGAAGAAATAATAGATAATATTAAAAAGGTTTGTTATGAGCCAGTT ATGATTGATGAAGTTATTGAAAAAATGTGTGATTTGTACAATGTCAAGCTTGATGCTAATCAATATGTGTTGGTTGGAAG TACAATACGTTCTTATATAACTTATTTATATGAGAATAATATGGTTGAATATATATTTGATGGTGGTAAGATGATGATAA AAGCTGTGTAA
Upstream 100 bases:
>100_bases TTTAATAAAAGAAATAAAAATATATTATAAAAACAATTTGATTGGAATTTTCAGAAAATTAATGCTATAATTAAAAGTAA ATTTAAAGGGAGGTTATAAA
Downstream 100 bases:
>100_bases ATAGTAATAATTTTCAAATTATATGATGAAATTGTTTTAGTATGACTGTTATTTGAAAAGTAATATAAAAAAATTTATAT AAATAAGCTAAGATGATTGA
Product: hydrolase
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Zinc Metallohydrolase; Metallo-Beta-Lactamase Domain Protein; Hydrolase; Beta-Lactamase-Like; Zn-Dependent Hydrolase Glyoxylase II Family; Metallo-Beta-Lactamase Superfamily Protein; Zinc-Dependent Hydrolase; Zinc-Dependent Hydrolase Glyoxylase II Family; Zn-Dependent Hydrolase Including Glyoxylase; Zinc Metallohydrolase Glyoxalase II Family; Beta-Lactamase-Like Protein
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MAKLTLEHIKGNTYYIPLPTIVGVYVDGKDAILIDSGNNKDTARQVLRLLEEHNLNPKLIINTHSNADHIGGNAYLKNQT KCKIATTKIEGYFTENPILESAFLYGGYPSKALKNKFLLAKESEVDYIIPSNGKIVDTELEAISLPGHYFEMIGVRTPDN VLFVADSLTPENIITKYHFFFLLDIDSQFKTLEKLRMLEADFFVPSHSVKTTDIKSLININKKKMEEIIDNIKKVCYEPV MIDEVIEKMCDLYNVKLDANQYVLVGSTIRSYITYLYENNMVEYIFDGGKMMIKAV
Sequences:
>Translated_296_residues MAKLTLEHIKGNTYYIPLPTIVGVYVDGKDAILIDSGNNKDTARQVLRLLEEHNLNPKLIINTHSNADHIGGNAYLKNQT KCKIATTKIEGYFTENPILESAFLYGGYPSKALKNKFLLAKESEVDYIIPSNGKIVDTELEAISLPGHYFEMIGVRTPDN VLFVADSLTPENIITKYHFFFLLDIDSQFKTLEKLRMLEADFFVPSHSVKTTDIKSLININKKKMEEIIDNIKKVCYEPV MIDEVIEKMCDLYNVKLDANQYVLVGSTIRSYITYLYENNMVEYIFDGGKMMIKAV >Mature_295_residues AKLTLEHIKGNTYYIPLPTIVGVYVDGKDAILIDSGNNKDTARQVLRLLEEHNLNPKLIINTHSNADHIGGNAYLKNQTK CKIATTKIEGYFTENPILESAFLYGGYPSKALKNKFLLAKESEVDYIIPSNGKIVDTELEAISLPGHYFEMIGVRTPDNV LFVADSLTPENIITKYHFFFLLDIDSQFKTLEKLRMLEADFFVPSHSVKTTDIKSLININKKKMEEIIDNIKKVCYEPVM IDEVIEKMCDLYNVKLDANQYVLVGSTIRSYITYLYENNMVEYIFDGGKMMIKAV
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33701; Mature: 33570
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLTLEHIKGNTYYIPLPTIVGVYVDGKDAILIDSGNNKDTARQVLRLLEEHNLNPKLI CCEEEEEEECCCEEEEECHHEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEE INTHSNADHIGGNAYLKNQTKCKIATTKIEGYFTENPILESAFLYGGYPSKALKNKFLLA EEECCCCCCCCCCEEECCCCEEEEEEEEEEEEECCCCCHHHHEEECCCCCHHHHCCEEEE KESEVDYIIPSNGKIVDTELEAISLPGHYFEMIGVRTPDNVLFVADSLTPENIITKYHFF ECCCCCEEECCCCEEEEEEEEEEECCCHHEEEEECCCCCCEEEEECCCCCHHHHEEEEEE FLLDIDSQFKTLEKLRMLEADFFVPSHSVKTTDIKSLININKKKMEEIIDNIKKVCYEPV EEEECCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCH MIDEVIEKMCDLYNVKLDANQYVLVGSTIRSYITYLYENNMVEYIFDGGKMMIKAV HHHHHHHHHHHHEEEEECCCCEEEECHHHHHHHHHHHHCCEEEEEECCCEEEEEEC >Mature Secondary Structure AKLTLEHIKGNTYYIPLPTIVGVYVDGKDAILIDSGNNKDTARQVLRLLEEHNLNPKLI CEEEEEEECCCEEEEECHHEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEE INTHSNADHIGGNAYLKNQTKCKIATTKIEGYFTENPILESAFLYGGYPSKALKNKFLLA EEECCCCCCCCCCEEECCCCEEEEEEEEEEEEECCCCCHHHHEEECCCCCHHHHCCEEEE KESEVDYIIPSNGKIVDTELEAISLPGHYFEMIGVRTPDNVLFVADSLTPENIITKYHFF ECCCCCEEECCCCEEEEEEEEEEECCCHHEEEEECCCCCCEEEEECCCCCHHHHEEEEEE FLLDIDSQFKTLEKLRMLEADFFVPSHSVKTTDIKSLININKKKMEEIIDNIKKVCYEPV EEEECCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCH MIDEVIEKMCDLYNVKLDANQYVLVGSTIRSYITYLYENNMVEYIFDGGKMMIKAV HHHHHHHHHHHHEEEEECCCCEEEECHHHHHHHHHHHHCCEEEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA