| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699380
Identifier: 126699380
GI number: 126699380
Start: 2052391
End: 2052768
Strand: Direct
Name: 126699380
Synonym: CD1771
Alternate gene names: NA
Gene position: 2052391-2052768 (Clockwise)
Preceding gene: 126699379
Following gene: 126699381
Centisome position: 47.84
GC content: 30.69
Gene sequence:
>378_bases ATGTGTGATAAAGTTATAGCATCAAAATATCATGAGAAGGGATTTAATTGTGCAGAATCAGTTATAAAAGCATATAATGA GGAATTTAATACAGATATACCAGTTTGTTTAGGAAGTGGACTGGGTTCAGGGTGTGGGGTTGCTAGTTTATGTGGTGCAG TAAATGCATCAAATATAATAATTGGATATGTAAAAGGCAGAAACCACGAAGATGAAAGTACTAAAGCTAAAGTATATGCT AAAGATTTAACTACAACAGTAAGAAAAGAGTATGGTTCAGAGTTATGTATAGACCTAAAAAAAGATTTAGTTGCTTGTAG AGAAATAATGGATTTCGCATATGATAGTCTAAAGGAAACTTTAAAAAAAGAATTATAA
Upstream 100 bases:
>100_bases TTTTATTGTTAATATTTGATATAATAATAGTAAAAAGAAGTATTTTTTACAAAAACAATGAAGAATTTATTTTAATTTAC AAAAATGAGGGGGAATTTTA
Downstream 100 bases:
>100_bases GAAAATAAGCTATCAAATATAAATTATTTGATAGCTTATTTTTATAGCCGATACTAAATAAATCAAATATATTTTAGAAT TATTATTTGTAAATAAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: C_GCAxxG_C_C Family Protein Subfamily
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MCDKVIASKYHEKGFNCAESVIKAYNEEFNTDIPVCLGSGLGSGCGVASLCGAVNASNIIIGYVKGRNHEDESTKAKVYA KDLTTTVRKEYGSELCIDLKKDLVACREIMDFAYDSLKETLKKEL
Sequences:
>Translated_125_residues MCDKVIASKYHEKGFNCAESVIKAYNEEFNTDIPVCLGSGLGSGCGVASLCGAVNASNIIIGYVKGRNHEDESTKAKVYA KDLTTTVRKEYGSELCIDLKKDLVACREIMDFAYDSLKETLKKEL >Mature_125_residues MCDKVIASKYHEKGFNCAESVIKAYNEEFNTDIPVCLGSGLGSGCGVASLCGAVNASNIIIGYVKGRNHEDESTKAKVYA KDLTTTVRKEYGSELCIDLKKDLVACREIMDFAYDSLKETLKKEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13684; Mature: 13684
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCDKVIASKYHEKGFNCAESVIKAYNEEFNTDIPVCLGSGLGSGCGVASLCGAVNASNII CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHCCCCCEE IGYVKGRNHEDESTKAKVYAKDLTTTVRKEYGSELCIDLKKDLVACREIMDFAYDSLKET EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKKEL HHHCC >Mature Secondary Structure MCDKVIASKYHEKGFNCAESVIKAYNEEFNTDIPVCLGSGLGSGCGVASLCGAVNASNII CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHCCCCCEE IGYVKGRNHEDESTKAKVYAKDLTTTVRKEYGSELCIDLKKDLVACREIMDFAYDSLKET EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKKEL HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA