Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699361

Identifier: 126699361

GI number: 126699361

Start: 2032847

End: 2033530

Strand: Direct

Name: 126699361

Synonym: CD1754

Alternate gene names: NA

Gene position: 2032847-2033530 (Clockwise)

Preceding gene: 126699360

Following gene: 126699362

Centisome position: 47.38

GC content: 23.54

Gene sequence:

>684_bases
ATGAGGCTAAAAAATCTTATTTTAGGAGATATAAAGTTTCAATTTAAGTATGGTTTTTATTTTTTATATCTTTTTTTAAG
TATTATATATATTTGTATTATCAATGTATTTCCAACTTTTATGAGAGAAAAAATAGCTATAATTATGATTTATTCTGACC
CAGCAGCAATGGGATTGTTTTTTATGGGAGCTATTGTACTTCTTGAGAAAAGTCAAAGGGTTTTAAATTCCTTAGCTGTA
TCTCCAGTAAAAGTATCTGAGTATATTTTATCAAAGGTAATTTCATTAGGAGTAATATCTAGTATTGTAGCTATGTTTAT
TGCTATTACATTAAATTTAGATAATATTATAATATCAACTATAGGTACCTTTTTTTCTTCTATTATATTTTCTTTGCTTG
GATTGATAATTGCAAGTAAAGCATCTAGTTTGAATCAGTTTATTGTTTTAAGTATTCCTATTGAGATTATATGCTTTATT
CCACCAATACTGAATGTACTTCTTGACACAAAATCATATGCAAATTTGTACCCTTTTAATATATGTATTTCTCTTATTAG
TGGAGATAAAAATTTTATAATGATTAATATTTTAATTTTAATATCAATTATAATAATAATTTATTTTATAACTTATTATT
TTATTTGTAGCAGTTGGAAAAAGGTAGGTGGAGTAAAACTATGA

Upstream 100 bases:

>100_bases
ATTTGAATATGCTTATTGAGAAAAATAAACTTTTATCAATACATAGTAGTGAACCAACATTAAATGATATTTTTATTGAG
ATAACAGGGAGGAATTTACA

Downstream 100 bases:

>100_bases
TAAAGATTATAAATGCGTTTAAACAAGAGTTTGAACAAATTAAGAGAGATGCTATGCTTTTTATAGTATGTGTTTCTCCA
ATATTATGTGGAGTATTTAT

Product: ABC transporter permease

Products: NA

Alternate protein names: ABC-2 Type Transporter Superfamily; Abc Transporter Permease Protein

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MRLKNLILGDIKFQFKYGFYFLYLFLSIIYICIINVFPTFMREKIAIIMIYSDPAAMGLFFMGAIVLLEKSQRVLNSLAV
SPVKVSEYILSKVISLGVISSIVAMFIAITLNLDNIIISTIGTFFSSIIFSLLGLIIASKASSLNQFIVLSIPIEIICFI
PPILNVLLDTKSYANLYPFNICISLISGDKNFIMINILILISIIIIIYFITYYFICSSWKKVGGVKL

Sequences:

>Translated_227_residues
MRLKNLILGDIKFQFKYGFYFLYLFLSIIYICIINVFPTFMREKIAIIMIYSDPAAMGLFFMGAIVLLEKSQRVLNSLAV
SPVKVSEYILSKVISLGVISSIVAMFIAITLNLDNIIISTIGTFFSSIIFSLLGLIIASKASSLNQFIVLSIPIEIICFI
PPILNVLLDTKSYANLYPFNICISLISGDKNFIMINILILISIIIIIYFITYYFICSSWKKVGGVKL
>Mature_227_residues
MRLKNLILGDIKFQFKYGFYFLYLFLSIIYICIINVFPTFMREKIAIIMIYSDPAAMGLFFMGAIVLLEKSQRVLNSLAV
SPVKVSEYILSKVISLGVISSIVAMFIAITLNLDNIIISTIGTFFSSIIFSLLGLIIASKASSLNQFIVLSIPIEIICFI
PPILNVLLDTKSYANLYPFNICISLISGDKNFIMINILILISIIIIIYFITYYFICSSWKKVGGVKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25540; Mature: 25540

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKNLILGDIKFQFKYGFYFLYLFLSIIYICIINVFPTFMREKIAIIMIYSDPAAMGLF
CCCCHHEEEHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHH
FMGAIVLLEKSQRVLNSLAVSPVKVSEYILSKVISLGVISSIVAMFIAITLNLDNIIIST
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
IGTFFSSIIFSLLGLIIASKASSLNQFIVLSIPIEIICFIPPILNVLLDTKSYANLYPFN
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHCCCCHHH
ICISLISGDKNFIMINILILISIIIIIYFITYYFICSSWKKVGGVKL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRLKNLILGDIKFQFKYGFYFLYLFLSIIYICIINVFPTFMREKIAIIMIYSDPAAMGLF
CCCCHHEEEHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHH
FMGAIVLLEKSQRVLNSLAVSPVKVSEYILSKVISLGVISSIVAMFIAITLNLDNIIIST
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
IGTFFSSIIFSLLGLIIASKASSLNQFIVLSIPIEIICFIPPILNVLLDTKSYANLYPFN
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHCCCCHHH
ICISLISGDKNFIMINILILISIIIIIYFITYYFICSSWKKVGGVKL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA