| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is 126699338
Identifier: 126699338
GI number: 126699338
Start: 2005891
End: 2007042
Strand: Direct
Name: 126699338
Synonym: CD1731
Alternate gene names: NA
Gene position: 2005891-2007042 (Clockwise)
Preceding gene: 126699336
Following gene: 126699339
Centisome position: 46.75
GC content: 25.17
Gene sequence:
>1152_bases ATGGAATTAAGACCAAGAAGTGCAAAATTAGAAGAATTTGATAAAGTAATAGAATTAATAAACTATGTATTTAGAATATC AAGAAGTCATAAACCAACTATGATGGAAGAATTTCCTCTTTTACTAAGTAAAAATAATATAGAAAATATGATTATAATAT CAGAAGATGATAAAGTGGTTTCTGATGTAAACTATCTAATTCAAGATGTATCTATTCAAGGAAACAGATTGAAGGTTGCA GCTATAGGTGGAGTATGTACTCATCCAGATTATGAAAAGAGAGGCTATTCATCTAAGATATTGGATAAAGTAGAAGAAAA AATGTTTTATGATGGTGTAGATATTGTAATTATATCAGGAACAAGAAGTCTATACAGTAGAAGAAATTGTAGTTTGGTAA AGAGTTTTTATAAATATACAATAAAACCTGAAGATGTAAAAATAGCATATGAAATAGTTGAATTTGATGAAACTAATTTT GAAAAAGATAATGATTTAGATAAAATGATTGAACTATATAATCAAAATAGTACTAGATTTATAAGAACGAGAGATGAGTT TCAAAAACTATTGCATGCAGCAACTATTGCCTGGGGACCAATTGGTTACAAGAAGGTATTTATAAAGGAAAATAATAATA TAATAGGATATTTGATAATAAGAACAATAAAAAAAGAAGATTCTACTGTAGGAGAAGTTGCTGAAATAGGGTTAAACTCT GTAAATGTTGAAAATATATTGAAATATGTTGCAAATAAATTTGGATTAGAATATTTAAATTATAAAGTACATGTGAAAAA TCTTAAAGACCAGTTGAAATGTAATGGGACAAAATCTTTGGACTATCAACAAGGAACTATGAAAATAATAAATTTTACTA AGTTGTGTGATAGTTTAAGAAGTTATTTTAGTCAATATGTAGATTTTGAATTACTAAAATACATGGAATTTAAACAAGTT GAAAATAAATATATTATTAAATACAAAGAAGAAGAACTTGTAATAGAAAATTTGGATAAGCTTAATAAACTGTTTTTTGA AAAAAATGAGGAACAGTACAATGAATTTAAACATCTAAAAAATATATATGAATTTGCTACAAAGGCATTTCCTGTAGATT TTCCATGGACTGCAAATTTAAATTATCAATAG
Upstream 100 bases:
>100_bases AATTGTAAAGAAAAAAGATATAATTAGAACTGTAGTAATAAATGTTTTATTATAGATAATAGAGTTTTAAGTATCTTAAA TAATATTTGGAGGAATATGA
Downstream 100 bases:
>100_bases TTTTAGATGATATTAAATAAAATTGATTGATACCTAGAGTTAGTCCTTGTTAAATAAGAGAAATTATTGGATATTGAAAA AGCAATTTTGTAAGTAATTA
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MELRPRSAKLEEFDKVIELINYVFRISRSHKPTMMEEFPLLLSKNNIENMIIISEDDKVVSDVNYLIQDVSIQGNRLKVA AIGGVCTHPDYEKRGYSSKILDKVEEKMFYDGVDIVIISGTRSLYSRRNCSLVKSFYKYTIKPEDVKIAYEIVEFDETNF EKDNDLDKMIELYNQNSTRFIRTRDEFQKLLHAATIAWGPIGYKKVFIKENNNIIGYLIIRTIKKEDSTVGEVAEIGLNS VNVENILKYVANKFGLEYLNYKVHVKNLKDQLKCNGTKSLDYQQGTMKIINFTKLCDSLRSYFSQYVDFELLKYMEFKQV ENKYIIKYKEEELVIENLDKLNKLFFEKNEEQYNEFKHLKNIYEFATKAFPVDFPWTANLNYQ
Sequences:
>Translated_383_residues MELRPRSAKLEEFDKVIELINYVFRISRSHKPTMMEEFPLLLSKNNIENMIIISEDDKVVSDVNYLIQDVSIQGNRLKVA AIGGVCTHPDYEKRGYSSKILDKVEEKMFYDGVDIVIISGTRSLYSRRNCSLVKSFYKYTIKPEDVKIAYEIVEFDETNF EKDNDLDKMIELYNQNSTRFIRTRDEFQKLLHAATIAWGPIGYKKVFIKENNNIIGYLIIRTIKKEDSTVGEVAEIGLNS VNVENILKYVANKFGLEYLNYKVHVKNLKDQLKCNGTKSLDYQQGTMKIINFTKLCDSLRSYFSQYVDFELLKYMEFKQV ENKYIIKYKEEELVIENLDKLNKLFFEKNEEQYNEFKHLKNIYEFATKAFPVDFPWTANLNYQ >Mature_383_residues MELRPRSAKLEEFDKVIELINYVFRISRSHKPTMMEEFPLLLSKNNIENMIIISEDDKVVSDVNYLIQDVSIQGNRLKVA AIGGVCTHPDYEKRGYSSKILDKVEEKMFYDGVDIVIISGTRSLYSRRNCSLVKSFYKYTIKPEDVKIAYEIVEFDETNF EKDNDLDKMIELYNQNSTRFIRTRDEFQKLLHAATIAWGPIGYKKVFIKENNNIIGYLIIRTIKKEDSTVGEVAEIGLNS VNVENILKYVANKFGLEYLNYKVHVKNLKDQLKCNGTKSLDYQQGTMKIINFTKLCDSLRSYFSQYVDFELLKYMEFKQV ENKYIIKYKEEELVIENLDKLNKLFFEKNEEQYNEFKHLKNIYEFATKAFPVDFPWTANLNYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45174; Mature: 45174
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELRPRSAKLEEFDKVIELINYVFRISRSHKPTMMEEFPLLLSKNNIENMIIISEDDKVV CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHEECCCCCEEEEECCCCHHH SDVNYLIQDVSIQGNRLKVAAIGGVCTHPDYEKRGYSSKILDKVEEKMFYDGVDIVIISG HHHHHHHHHCEECCCEEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCEEEEEC TRSLYSRRNCSLVKSFYKYTIKPEDVKIAYEIVEFDETNFEKDNDLDKMIELYNQNSTRF CHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEE IRTRDEFQKLLHAATIAWGPIGYKKVFIKENNNIIGYLIIRTIKKEDSTVGEVAEIGLNS EECHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEEEEHHCCCCHHHHHHHHCCCC VNVENILKYVANKFGLEYLNYKVHVKNLKDQLKCNGTKSLDYQQGTMKIINFTKLCDSLR CCHHHHHHHHHHHHCHHHHEEEEEEECHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH SYFSQYVDFELLKYMEFKQVENKYIIKYKEEELVIENLDKLNKLFFEKNEEQYNEFKHLK HHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH NIYEFATKAFPVDFPWTANLNYQ HHHHHHHHCCCCCCCEECCCCCC >Mature Secondary Structure MELRPRSAKLEEFDKVIELINYVFRISRSHKPTMMEEFPLLLSKNNIENMIIISEDDKVV CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHEECCCCCEEEEECCCCHHH SDVNYLIQDVSIQGNRLKVAAIGGVCTHPDYEKRGYSSKILDKVEEKMFYDGVDIVIISG HHHHHHHHHCEECCCEEEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCEEEEEC TRSLYSRRNCSLVKSFYKYTIKPEDVKIAYEIVEFDETNFEKDNDLDKMIELYNQNSTRF CHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEE IRTRDEFQKLLHAATIAWGPIGYKKVFIKENNNIIGYLIIRTIKKEDSTVGEVAEIGLNS EECHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEEEEHHCCCCHHHHHHHHCCCC VNVENILKYVANKFGLEYLNYKVHVKNLKDQLKCNGTKSLDYQQGTMKIINFTKLCDSLR CCHHHHHHHHHHHHCHHHHEEEEEEECHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH SYFSQYVDFELLKYMEFKQVENKYIIKYKEEELVIENLDKLNKLFFEKNEEQYNEFKHLK HHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH NIYEFATKAFPVDFPWTANLNYQ HHHHHHHHCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA