Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699336

Identifier: 126699336

GI number: 126699336

Start: 2003882

End: 2004088

Strand: Direct

Name: 126699336

Synonym: CD1729A

Alternate gene names: NA

Gene position: 2003882-2004088 (Clockwise)

Preceding gene: 126699334

Following gene: 126699338

Centisome position: 46.71

GC content: 19.32

Gene sequence:

>311_bases
TTTTATGTAAAGAAAACTATAGATTATATTCACAAAAATTACTCAGAAGATATAACAGTAAGTAATATATGTAATGAATT
ACAACTTAATAAAAGTTATTTTTTTCTTTGTTTAAGAAAAAAAGTGGATATACTTTTACTAATTTTTTAAATAAAGTTAG
AGTTGAAAAAAGCAAAAAGTATATATTAAAAAAAGACTTGTCTATTTTAGACGTTGCTGTACTAATTGGATTCAATAGTC
AAAATTACTATAGTATAATTTTTAAAAAGTTTAATAACTTTACACCAATTGAATATAAAAATATTTATAAC

Upstream 100 bases:

>100_bases
TATTACAGTTTCTAACATCATTCATAAATTATTTTAACAAATAGAAATTGATTTTTTAATAAATATGCCTTGATAAAATG
AAACATAGACCAACTCTTAG

Downstream 100 bases:

>100_bases
TAAAAAATATCATTCTAAAAAGATGTTATTTTTTTACATATTTTTTACAATTATAGTTAATTCTTTGTTAAATTGATTGT
ACATAAAATACTAAAAATCT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 69

Protein sequence:

>104_residues
FYVKKTIDYIHKNYSEDITVSNICNELQLNKSYFFSLFKKKSGYTFTNFLNKVRVEKSKKYILKKDLSILDVAVLIGFNS
QNYYSIIFKKFNNFTPIEYKNIYN

Sequences:

>Translated_69_residues
VINIFIFNWCKVIKLFKNYTIVILTIESN*YSNV*NRQVFF*YILFAFFNSNFI*KISKSISTFFLKQR
>Mature_69_residues
VINIFIFNWCKVIKLFKNYTIVILTIESN*YSNV*NRQVFF*YILFAFFNSNFI*KISKSISTFFLKQR

Specific function: Unknown

COG id: COG4753

COG function: function code T; Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7813; Mature: 7813

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
VINIFIFNWCKVIKLFKNYTIVILTIESNYSNVNRQVFFYILFAFFNSNFIKISKSISTF
CEEEEEEHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCEEE
FLKQR
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA