| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699336
Identifier: 126699336
GI number: 126699336
Start: 2003882
End: 2004088
Strand: Direct
Name: 126699336
Synonym: CD1729A
Alternate gene names: NA
Gene position: 2003882-2004088 (Clockwise)
Preceding gene: 126699334
Following gene: 126699338
Centisome position: 46.71
GC content: 19.32
Gene sequence:
>311_bases TTTTATGTAAAGAAAACTATAGATTATATTCACAAAAATTACTCAGAAGATATAACAGTAAGTAATATATGTAATGAATT ACAACTTAATAAAAGTTATTTTTTTCTTTGTTTAAGAAAAAAAGTGGATATACTTTTACTAATTTTTTAAATAAAGTTAG AGTTGAAAAAAGCAAAAAGTATATATTAAAAAAAGACTTGTCTATTTTAGACGTTGCTGTACTAATTGGATTCAATAGTC AAAATTACTATAGTATAATTTTTAAAAAGTTTAATAACTTTACACCAATTGAATATAAAAATATTTATAAC
Upstream 100 bases:
>100_bases TATTACAGTTTCTAACATCATTCATAAATTATTTTAACAAATAGAAATTGATTTTTTAATAAATATGCCTTGATAAAATG AAACATAGACCAACTCTTAG
Downstream 100 bases:
>100_bases TAAAAAATATCATTCTAAAAAGATGTTATTTTTTTACATATTTTTTACAATTATAGTTAATTCTTTGTTAAATTGATTGT ACATAAAATACTAAAAATCT
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>104_residues FYVKKTIDYIHKNYSEDITVSNICNELQLNKSYFFSLFKKKSGYTFTNFLNKVRVEKSKKYILKKDLSILDVAVLIGFNS QNYYSIIFKKFNNFTPIEYKNIYN
Sequences:
>Translated_69_residues VINIFIFNWCKVIKLFKNYTIVILTIESN*YSNV*NRQVFF*YILFAFFNSNFI*KISKSISTFFLKQR >Mature_69_residues VINIFIFNWCKVIKLFKNYTIVILTIESN*YSNV*NRQVFF*YILFAFFNSNFI*KISKSISTFFLKQR
Specific function: Unknown
COG id: COG4753
COG function: function code T; Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7813; Mature: 7813
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure VINIFIFNWCKVIKLFKNYTIVILTIESNYSNVNRQVFFYILFAFFNSNFIKISKSISTF CEEEEEEHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCEEE FLKQR EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA