| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699325
Identifier: 126699325
GI number: 126699325
Start: 1992553
End: 1992918
Strand: Direct
Name: 126699325
Synonym: CD1718
Alternate gene names: NA
Gene position: 1992553-1992918 (Clockwise)
Preceding gene: 126699324
Following gene: 126699326
Centisome position: 46.44
GC content: 33.06
Gene sequence:
>3429_bases ATGTATCGTGTAGGAATTGACGTTGGAGGAACAAATACGGATGCTTGTATACTGGATGGGGAATTAAAAGTAATTCATTC AGTTAAGGTGGCAACTACAAAAGATGTTGAAACTGGTGTTTACAATGCCTTAAAAAAAGTTATAGATGAAAGTAAGATTG ACCATTCATTAATAAAATATGCTATGCTTGGTACAACTCATTGTACAAATGCTATTGTAGAAAGAAAAAGACTTAATAAT GTGGCTATGATAAGAATAGGAAAGCCAGCCACTACTGCCATTCTTCCATTTATAGATTGGCCAGAAGACTTAAGAGAAAA AATAGAATTAGATTCAATATTGGTATCTGGTGGATATGAGTTTGATTAAAAAATAGCTACGCACACTCGTGACTTTAGTC ATGAGTTAGTAGCTAAATTAGTCAGCATATAGGGAAACCTATATGTAGAGATAGGATAGAACCTATCCAATACTACTTGA ATTGCTGGAAACCCCTAAAGCTAACCAAACTAAAACATAAGGATGAAATAAACCTAAGTGTGAAAGTTACGAAAGTAGAA AAAATTGGTTAGATGGTATAAGGTTAAATCCTAAGTACTTTAAAATGGGCAATCAGCAGGTAAACTCCGAATAGGAGAAA CTTCAACGACTATTCCTCTTGAGGGAAGTACACTACAAGCTATTGGTAGTGGAAGTGGGTAGACCTTAACGGATAATGCC GAAGGATAAGATATAGTCTGTGCTTGCATGAAAGTGTAAGAAGTTCATAAGAGAACTGCATAGGTAGTAGCGAACTTATG TGAACGACAACCTCAAAAATGATAAAAGTTAAGACTTACGGTTCTTAAATATGTTATTTAAAATTAAATATAAAACCTTC TAAATAATTGTTTTAAATAATTACATTTGTTAACATTATTATAGGTGATTAATAAATTGTTCACCACAGCATTATATAAT ATATTAAATGTGATAAAATCATTAAAAAGTGTATCAAAAAACAATTAAAGTGAGGTGATAGCAGTGGAAAAAGCTTATAA GTTTAGAATGTATCCAAATAAAAAACAACAAGAGTTAATTAACAAAACTTTTGGATGTTGTAGATTTGTATATAATAAGT ATCTTGCTAAAAGAATAGATGTTTATAAAAACGATAAAGAAACTTTTACTTATAAACAGTGTAGTTCTGATTTGACCAAT TTAAAAAAAGAATTAAATTGGCTTAAAGAACCTGACAAATTTTCACTACAAAACGCCTTAAAAGATTTAGATAATGCATA TAAAAAATTCTTTAAAGAAAAAGCAGGATTTCCTAAATTTAAATCAAAGAAAATTAATAGATTTTCATATAAAACTAACT TTACAAATGGAAACATTATGTATTGTGGTCAACATATAAAACTACCTAAACTTGGTATGGTTAAGATAAGGGATAAACAA GTACCTCAAGGTAGAATACTTAATGCTACTATATCTAAAGAACCAAGTGGTAGATATTATGTATCATTATGCTGTACTGA TGTAGATATTGAAGCATTTGAAAATACTAATAATCAGATAGGTTTAGATTTAGGAATTAAAGAATTTTGTATCTCAAGTT GTGGAGAATTTATAGAAAATCCTAAGTATCTTAAGAAGTCATTAAACAAACTTGCTAAATTACAAAGAGAATTATCGAGA AAGACAATCGGTAGTTTAAATAGAAATAAAGCAAGATTAAAAGTTGCAAGATTTCAAGAACATATAGCTAATCAAAGAAA TGATTTTCTACAAAAACTATCTACTAAATTAATAAAAGAGAATGATATTATTTGCATAGAAGATTTACAAGTAAAGAATA TGATTAGAAATCGTAAACTATCTCGCTTAATTTCAGATGTATCATGGTCAGAATTTATTCGTCAATTAGAATACAAGGCT AATTGGTATGGTAGACAAATTGTAAAGGTAGGTAAATTCTTTGCAAGTTCACAAATATGTAATAAATGTGGGTATAAAAA CGAGGAAGTGAAGGACTTAAATATAAGAGAATGGATTTGTCCTAGTTGTAATGAAACTCACGATAGAGATATAAATGCAA GTATAAATATATTAAAAGAAGGATTAAGACTAATAACAATTCAAAATAAATAACTTATGTAAGAACCGTAGGAACTACGG GGATAGCCTGTGGAGAATTAGTAAGACATATTTTAGTATGCAAAATTCTGTGAAGCAGGAACCCTGTGACTTTAGTCATG GGAGGTTCAGGGTAGAAAGATAAATGAACTTTGTAAAGATGAAGTTGTAGAGTTTTGCAATAGAATAAAAGGTAAAGTGG AAAGTGTTGCAATAAGTGGAGTATTTGCTCCAGTAAATAAACAACAAGAAGAAGAAGTTGCAAAATGGGTTAGAGAAATT TTAGGGGATATTCCTATATCTTTATCAAATGAAATAGGTAATATAGGTATATTAGAAAGAGAAAATGGAGCTATTTTAAA TTCTGCATTGTCTCAAGTAGGTAAAGCTGTATCTTTAGGATTTGAAAAAGCACTTAAAGACTTAGGTATAGATGCTCAAA TATATTTCAGTCAAAATGATGGAACATTAATGAATTTAGAGTATACAATGAAATACCCAATTTTTACAATTGGATGTGGA ATAACAAATTCTATAAGAGGAGCTTCCTTCTTATCAAAAGTAAAAAATGCAATAGTATTAGATGTTGGTGGAACTACAAG CGACTTGGGTGTACTATATAATGGATTCCCTAGAGAATCATCTATTCCAGTTACAATTGGAGGAGTACATACAAACTTTA GAATGCCAGATGTTTTAACTATTGGTCTTGCTGGTGGTACATGTGTAAAAGGCGAAAAAGATAATATAAAGATAGGTCCT GAAAGTGTGGGATATAGAATAACTGAAGATGCAATAATATTTGGTGGAGACACTCTAACTTTATCAGATGTTGTTACAAA ATTAGATATGGCGTTTGAAGATAGAAAAAGCAATGTTGAAAACTTAGATAAAGAGTATTGTAATGAGGTATATAAGAAGG TTATTTTAAAATTAGAAGATGCTGTAGACCAAATGAAGACTAGTCAAGATGATGTTGAATTGGTTTTAACTGGTGGAGGA AGTATAATTGTTCCTGAAAAACTAAAAGGCATAAGCAATGTTATAAGACCTCCTCATTATACTGCTGCAAATGCTATTGG TGCAGCTTTAGGACAAATAAGTGGAGATGTAGAAAAAGTATACAGTTTAGATAAAATGTCGAGAGAAGATGCCATAGAAG ATGCAAAAAAAGAGGCTGTAAATAAAGCTCTAAAAGCTGGTGCTAAAGAAGATACTATAGAAGTATTAAATATAGAAGAT GTTCCACTTGCATACCTTCCTGGTAATGCACTTCTTATAAAAGTAAAAGTTGTTGGTGATTTAATTTAA
Upstream 100 bases:
>100_bases AAGGAATTGAGACAGTTGGACCTGGATACTTTGGATATGATGTGGAATATAAAACAGTAGAAGAATTACAAGGAAAATAA AAGTTTAGGAGGAAATTTTG
Downstream 100 bases:
>100_bases AGAATAAATATAAGTATTTCCAGAATTATATAAATATTTCTGGACTCATTTTTAAACTTATTTTATCAATAAAAACAGCA TAACTTTTGACTATATTCTT
Product: hydantoinase
Products: NA
Alternate protein names: Hydantoinase; Hydantoinase A; Hydantoinase/Oxoprolinase Family Protein; Hydantoin Utilization Protein; N-Methylhydantoinase; N-Methylhydantoinase A Related Protein; Hydantoinase Beta Subunit-Like Protein; Hydantoinase/Oxoprolinase Protein Family; Hydantoinase/Oxoprolinase Domain Family Protein; Hydantoin Utilization Protein A; N-Methylhydantoinase A Beta-Subunit; N-Methylhydantoinase A/Acetone Carboxylase Subunit Beta; N-Methylhydantoinase A Subunit Beta; N-Methylhydantoinase A; N-Methylhydantoinase/5-Oxoprolinase Protein
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>514_residues MYRVGIDVGGTNTDACILDGELKVIHSVKVATTKDVETGVYNALKKVIDESKIDHSLIKYAMLGTTHCTNAIVERKRLNN VAMIRIGKPATTAILPFIDWPEDLREKIELDSILVSGGYEFDGRKINELCKDEVVEFCNRIKGKVESVAISGVFAPVNKQ QEEEVAKWVREILGDIPISLSNEIGNIGILERENGAILNSALSQVGKAVSLGFEKALKDLGIDAQIYFSQNDGTLMNLEY TMKYPIFTIGCGITNSIRGASFLSKVKNAIVLDVGGTTSDLGVLYNGFPRESSIPVTIGGVHTNFRMPDVLTIGLAGGTC VKGEKDNIKIGPESVGYRITEDAIIFGGDTLTLSDVVTKLDMAFEDRKSNVENLDKEYCNEVYKKVILKLEDAVDQMKTS QDDVELVLTGGGSIIVPEKLKGISNVIRPPHYTAANAIGAALGQISGDVEKVYSLDKMSREDAIEDAKKEAVNKALKAGA KEDTIEVLNIEDVPLAYLPGNALLIKVKVVGDLI
Sequences:
>Translated_122_residues MYRVGIDVGGTNTDACILDGELKVIHSVKVATTKDVETGVYNALKKVIDESKIDHSLIKYAMLGTTHCTNAIVERKRLNN VAMIRIGKPATTAILPFIDWPEDLREKIELDSILVSGGYEFD >Mature_122_residues MYRVGIDVGGTNTDACILDGELKVIHSVKVATTKDVETGVYNALKKVIDESKIDHSLIKYAMLGTTHCTNAIVERKRLNN VAMIRIGKPATTAILPFIDWPEDLREKIELDSILVSGGYEFD
Specific function: Unknown
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13493; Mature: 13493
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRVGIDVGGTNTDACILDGELKVIHSVKVATTKDVETGVYNALKKVIDESKIDHSLIKY CEEEEEEECCCCCCEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHH AMLGTTHCTNAIVERKRLNNVAMIRIGKPATTAILPFIDWPEDLREKIELDSILVSGGYE HHHCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHEEEECCCCC FD CC >Mature Secondary Structure MYRVGIDVGGTNTDACILDGELKVIHSVKVATTKDVETGVYNALKKVIDESKIDHSLIKY CEEEEEEECCCCCCEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHH AMLGTTHCTNAIVERKRLNNVAMIRIGKPATTAILPFIDWPEDLREKIELDSILVSGGYE HHHCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHEEEECCCCC FD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA