Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699324

Identifier: 126699324

GI number: 126699324

Start: 1991453

End: 1992532

Strand: Direct

Name: 126699324

Synonym: CD1717

Alternate gene names: NA

Gene position: 1991453-1992532 (Clockwise)

Preceding gene: 126699323

Following gene: 126699325

Centisome position: 46.42

GC content: 33.8

Gene sequence:

>1080_bases
ATGAGATTTTTAACAGAAGAAAGTGTAGATAAAATAGCAGTTGGTGCAGCAGTGCTTGGAACTGGAGGTGGAGGTGACCC
ATATGTAGGTAAATTGGTTGCAAAACAAGCCATTAAAAAGTATGGTCCTGTAAAAGTAATAAGTTTAGATGAACTTGATG
ATGATGCTTTGGTAGTTCCAGTATCTGGTATGGGTTCTCCTGTAATTACAATAGAAAAATTACTTTCAGAAGTAGAGTTA
ACTACCCCTTTAGAAATAATGGAGAAATTATTAAATAGAAAAGTGGATGTTATAATTCCTATAGAAATAGGAGGGATAAA
CTCACTTATGCCTATAGCAGTTGCTGCTAAAAAAGGACTTCCTATCTTAGATGCAGATTCTATGGGTAGAGCTTTCCCTG
AAGCTCAAATGGTAACTTTTTATCTTGAAGGATATGAGGCATCTCCTGCCGTAATGTCTGATGAAAAAGGTAATTCTGCC
ATCCTTTATCCTGTGGATGGAATTTGGTCAGAAAGATTAGCTAGAACTTTAACTGTAGAAATGGGAGGAAGTTCTTCTAT
TAGTGATTATAATTTAAGTGGAGCTCAAGTTAAAAAAGCTGCTATAGGTAATACTCTTACAATAGCTGAAACTATAGGAG
GGTTTTTACTTGAAAATAAATCTGATTCAAAAGGTGCTGTTGAGAATATACTAAAAGAATTGCGTGGATACAAGTTATTT
GAAGGAAAAGTAATTGATATTAAGAGAGAGTTGAAAGGTGGATTTACTAGAGGACATGCCTTTTTTGCTGGGATTAATGA
GTATGATGGAGAGTATTCTATATTATTCCAAAATGAGAATTTAATTGCCAAAAAAGGTGATACACCACTTTGTATTACAC
CAGATTTAATAGCAGTATTAGATTTAGAAACTGGATTTCCAATAACTACAGAAAGAATAAAATATGGTTCTCGTGTTATG
GTAGTAGCTTTTCCTTGTAATGAAAAGTGGAGAACAGAAAAAGGAATTGAGACAGTTGGACCTGGATACTTTGGATATGA
TGTGGAATATAAAACAGTAGAAGAATTACAAGGAAAATAA

Upstream 100 bases:

>100_bases
TGCTTTGTTCAACAAAAAATAAGCAAGAAATAGACAAAGCAGTATAAAGAAATTTGTTTATAAAGTATAAAATAAATTAG
AAATATGAGGAGAAAGTAAC

Downstream 100 bases:

>100_bases
AAGTTTAGGAGGAAATTTTGATGTATCGTGTAGGAATTGACGTTGGAGGAACAAATACGGATGCTTGTATACTGGATGGG
GAATTAAAAGTAATTCATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MRFLTEESVDKIAVGAAVLGTGGGGDPYVGKLVAKQAIKKYGPVKVISLDELDDDALVVPVSGMGSPVITIEKLLSEVEL
TTPLEIMEKLLNRKVDVIIPIEIGGINSLMPIAVAAKKGLPILDADSMGRAFPEAQMVTFYLEGYEASPAVMSDEKGNSA
ILYPVDGIWSERLARTLTVEMGGSSSISDYNLSGAQVKKAAIGNTLTIAETIGGFLLENKSDSKGAVENILKELRGYKLF
EGKVIDIKRELKGGFTRGHAFFAGINEYDGEYSILFQNENLIAKKGDTPLCITPDLIAVLDLETGFPITTERIKYGSRVM
VVAFPCNEKWRTEKGIETVGPGYFGYDVEYKTVEELQGK

Sequences:

>Translated_359_residues
MRFLTEESVDKIAVGAAVLGTGGGGDPYVGKLVAKQAIKKYGPVKVISLDELDDDALVVPVSGMGSPVITIEKLLSEVEL
TTPLEIMEKLLNRKVDVIIPIEIGGINSLMPIAVAAKKGLPILDADSMGRAFPEAQMVTFYLEGYEASPAVMSDEKGNSA
ILYPVDGIWSERLARTLTVEMGGSSSISDYNLSGAQVKKAAIGNTLTIAETIGGFLLENKSDSKGAVENILKELRGYKLF
EGKVIDIKRELKGGFTRGHAFFAGINEYDGEYSILFQNENLIAKKGDTPLCITPDLIAVLDLETGFPITTERIKYGSRVM
VVAFPCNEKWRTEKGIETVGPGYFGYDVEYKTVEELQGK
>Mature_359_residues
MRFLTEESVDKIAVGAAVLGTGGGGDPYVGKLVAKQAIKKYGPVKVISLDELDDDALVVPVSGMGSPVITIEKLLSEVEL
TTPLEIMEKLLNRKVDVIIPIEIGGINSLMPIAVAAKKGLPILDADSMGRAFPEAQMVTFYLEGYEASPAVMSDEKGNSA
ILYPVDGIWSERLARTLTVEMGGSSSISDYNLSGAQVKKAAIGNTLTIAETIGGFLLENKSDSKGAVENILKELRGYKLF
EGKVIDIKRELKGGFTRGHAFFAGINEYDGEYSILFQNENLIAKKGDTPLCITPDLIAVLDLETGFPITTERIKYGSRVM
VVAFPCNEKWRTEKGIETVGPGYFGYDVEYKTVEELQGK

Specific function: Unknown

COG id: COG3535

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38831; Mature: 38831

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLTEESVDKIAVGAAVLGTGGGGDPYVGKLVAKQAIKKYGPVKVISLDELDDDALVVP
CCCCCHHCHHHHEECEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEE
VSGMGSPVITIEKLLSEVELTTPLEIMEKLLNRKVDVIIPIEIGGINSLMPIAVAAKKGL
ECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCC
PILDADSMGRAFPEAQMVTFYLEGYEASPAVMSDEKGNSAILYPVDGIWSERLARTLTVE
CEECCCCCCCCCCCCEEEEEEEECCCCCCCEECCCCCCEEEEEECCCHHHHHHHEEEEEE
MGGSSSISDYNLSGAQVKKAAIGNTLTIAETIGGFLLENKSDSKGAVENILKELRGYKLF
ECCCCCCCCCCCCHHHHHHHHCCCEEEEHHHHCCEEEECCCCCCHHHHHHHHHHCCCEEE
EGKVIDIKRELKGGFTRGHAFFAGINEYDGEYSILFQNENLIAKKGDTPLCITPDLIAVL
CCEEEEEEHHHCCCCCCCCEEEEECCCCCCCEEEEEECCCEEEECCCCCEEECCCEEEEE
DLETGFPITTERIKYGSRVMVVAFPCNEKWRTEKGIETVGPGYFGYDVEYKTVEELQGK
EECCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCEEEHHHHCCC
>Mature Secondary Structure
MRFLTEESVDKIAVGAAVLGTGGGGDPYVGKLVAKQAIKKYGPVKVISLDELDDDALVVP
CCCCCHHCHHHHEECEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEE
VSGMGSPVITIEKLLSEVELTTPLEIMEKLLNRKVDVIIPIEIGGINSLMPIAVAAKKGL
ECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCC
PILDADSMGRAFPEAQMVTFYLEGYEASPAVMSDEKGNSAILYPVDGIWSERLARTLTVE
CEECCCCCCCCCCCCEEEEEEEECCCCCCCEECCCCCCEEEEEECCCHHHHHHHEEEEEE
MGGSSSISDYNLSGAQVKKAAIGNTLTIAETIGGFLLENKSDSKGAVENILKELRGYKLF
ECCCCCCCCCCCCHHHHHHHHCCCEEEEHHHHCCEEEECCCCCCHHHHHHHHHHCCCEEE
EGKVIDIKRELKGGFTRGHAFFAGINEYDGEYSILFQNENLIAKKGDTPLCITPDLIAVL
CCEEEEEEHHHCCCCCCCCEEEEECCCCCCCEEEEEECCCEEEECCCCCEEECCCEEEEE
DLETGFPITTERIKYGSRVMVVAFPCNEKWRTEKGIETVGPGYFGYDVEYKTVEELQGK
EECCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA