| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699324
Identifier: 126699324
GI number: 126699324
Start: 1991453
End: 1992532
Strand: Direct
Name: 126699324
Synonym: CD1717
Alternate gene names: NA
Gene position: 1991453-1992532 (Clockwise)
Preceding gene: 126699323
Following gene: 126699325
Centisome position: 46.42
GC content: 33.8
Gene sequence:
>1080_bases ATGAGATTTTTAACAGAAGAAAGTGTAGATAAAATAGCAGTTGGTGCAGCAGTGCTTGGAACTGGAGGTGGAGGTGACCC ATATGTAGGTAAATTGGTTGCAAAACAAGCCATTAAAAAGTATGGTCCTGTAAAAGTAATAAGTTTAGATGAACTTGATG ATGATGCTTTGGTAGTTCCAGTATCTGGTATGGGTTCTCCTGTAATTACAATAGAAAAATTACTTTCAGAAGTAGAGTTA ACTACCCCTTTAGAAATAATGGAGAAATTATTAAATAGAAAAGTGGATGTTATAATTCCTATAGAAATAGGAGGGATAAA CTCACTTATGCCTATAGCAGTTGCTGCTAAAAAAGGACTTCCTATCTTAGATGCAGATTCTATGGGTAGAGCTTTCCCTG AAGCTCAAATGGTAACTTTTTATCTTGAAGGATATGAGGCATCTCCTGCCGTAATGTCTGATGAAAAAGGTAATTCTGCC ATCCTTTATCCTGTGGATGGAATTTGGTCAGAAAGATTAGCTAGAACTTTAACTGTAGAAATGGGAGGAAGTTCTTCTAT TAGTGATTATAATTTAAGTGGAGCTCAAGTTAAAAAAGCTGCTATAGGTAATACTCTTACAATAGCTGAAACTATAGGAG GGTTTTTACTTGAAAATAAATCTGATTCAAAAGGTGCTGTTGAGAATATACTAAAAGAATTGCGTGGATACAAGTTATTT GAAGGAAAAGTAATTGATATTAAGAGAGAGTTGAAAGGTGGATTTACTAGAGGACATGCCTTTTTTGCTGGGATTAATGA GTATGATGGAGAGTATTCTATATTATTCCAAAATGAGAATTTAATTGCCAAAAAAGGTGATACACCACTTTGTATTACAC CAGATTTAATAGCAGTATTAGATTTAGAAACTGGATTTCCAATAACTACAGAAAGAATAAAATATGGTTCTCGTGTTATG GTAGTAGCTTTTCCTTGTAATGAAAAGTGGAGAACAGAAAAAGGAATTGAGACAGTTGGACCTGGATACTTTGGATATGA TGTGGAATATAAAACAGTAGAAGAATTACAAGGAAAATAA
Upstream 100 bases:
>100_bases TGCTTTGTTCAACAAAAAATAAGCAAGAAATAGACAAAGCAGTATAAAGAAATTTGTTTATAAAGTATAAAATAAATTAG AAATATGAGGAGAAAGTAAC
Downstream 100 bases:
>100_bases AAGTTTAGGAGGAAATTTTGATGTATCGTGTAGGAATTGACGTTGGAGGAACAAATACGGATGCTTGTATACTGGATGGG GAATTAAAAGTAATTCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MRFLTEESVDKIAVGAAVLGTGGGGDPYVGKLVAKQAIKKYGPVKVISLDELDDDALVVPVSGMGSPVITIEKLLSEVEL TTPLEIMEKLLNRKVDVIIPIEIGGINSLMPIAVAAKKGLPILDADSMGRAFPEAQMVTFYLEGYEASPAVMSDEKGNSA ILYPVDGIWSERLARTLTVEMGGSSSISDYNLSGAQVKKAAIGNTLTIAETIGGFLLENKSDSKGAVENILKELRGYKLF EGKVIDIKRELKGGFTRGHAFFAGINEYDGEYSILFQNENLIAKKGDTPLCITPDLIAVLDLETGFPITTERIKYGSRVM VVAFPCNEKWRTEKGIETVGPGYFGYDVEYKTVEELQGK
Sequences:
>Translated_359_residues MRFLTEESVDKIAVGAAVLGTGGGGDPYVGKLVAKQAIKKYGPVKVISLDELDDDALVVPVSGMGSPVITIEKLLSEVEL TTPLEIMEKLLNRKVDVIIPIEIGGINSLMPIAVAAKKGLPILDADSMGRAFPEAQMVTFYLEGYEASPAVMSDEKGNSA ILYPVDGIWSERLARTLTVEMGGSSSISDYNLSGAQVKKAAIGNTLTIAETIGGFLLENKSDSKGAVENILKELRGYKLF EGKVIDIKRELKGGFTRGHAFFAGINEYDGEYSILFQNENLIAKKGDTPLCITPDLIAVLDLETGFPITTERIKYGSRVM VVAFPCNEKWRTEKGIETVGPGYFGYDVEYKTVEELQGK >Mature_359_residues MRFLTEESVDKIAVGAAVLGTGGGGDPYVGKLVAKQAIKKYGPVKVISLDELDDDALVVPVSGMGSPVITIEKLLSEVEL TTPLEIMEKLLNRKVDVIIPIEIGGINSLMPIAVAAKKGLPILDADSMGRAFPEAQMVTFYLEGYEASPAVMSDEKGNSA ILYPVDGIWSERLARTLTVEMGGSSSISDYNLSGAQVKKAAIGNTLTIAETIGGFLLENKSDSKGAVENILKELRGYKLF EGKVIDIKRELKGGFTRGHAFFAGINEYDGEYSILFQNENLIAKKGDTPLCITPDLIAVLDLETGFPITTERIKYGSRVM VVAFPCNEKWRTEKGIETVGPGYFGYDVEYKTVEELQGK
Specific function: Unknown
COG id: COG3535
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38831; Mature: 38831
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFLTEESVDKIAVGAAVLGTGGGGDPYVGKLVAKQAIKKYGPVKVISLDELDDDALVVP CCCCCHHCHHHHEECEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEE VSGMGSPVITIEKLLSEVELTTPLEIMEKLLNRKVDVIIPIEIGGINSLMPIAVAAKKGL ECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCC PILDADSMGRAFPEAQMVTFYLEGYEASPAVMSDEKGNSAILYPVDGIWSERLARTLTVE CEECCCCCCCCCCCCEEEEEEEECCCCCCCEECCCCCCEEEEEECCCHHHHHHHEEEEEE MGGSSSISDYNLSGAQVKKAAIGNTLTIAETIGGFLLENKSDSKGAVENILKELRGYKLF ECCCCCCCCCCCCHHHHHHHHCCCEEEEHHHHCCEEEECCCCCCHHHHHHHHHHCCCEEE EGKVIDIKRELKGGFTRGHAFFAGINEYDGEYSILFQNENLIAKKGDTPLCITPDLIAVL CCEEEEEEHHHCCCCCCCCEEEEECCCCCCCEEEEEECCCEEEECCCCCEEECCCEEEEE DLETGFPITTERIKYGSRVMVVAFPCNEKWRTEKGIETVGPGYFGYDVEYKTVEELQGK EECCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCEEEHHHHCCC >Mature Secondary Structure MRFLTEESVDKIAVGAAVLGTGGGGDPYVGKLVAKQAIKKYGPVKVISLDELDDDALVVP CCCCCHHCHHHHEECEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEE VSGMGSPVITIEKLLSEVELTTPLEIMEKLLNRKVDVIIPIEIGGINSLMPIAVAAKKGL ECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCC PILDADSMGRAFPEAQMVTFYLEGYEASPAVMSDEKGNSAILYPVDGIWSERLARTLTVE CEECCCCCCCCCCCCEEEEEEEECCCCCCCEECCCCCCEEEEEECCCHHHHHHHEEEEEE MGGSSSISDYNLSGAQVKKAAIGNTLTIAETIGGFLLENKSDSKGAVENILKELRGYKLF ECCCCCCCCCCCCHHHHHHHHCCCEEEEHHHHCCEEEECCCCCCHHHHHHHHHHCCCEEE EGKVIDIKRELKGGFTRGHAFFAGINEYDGEYSILFQNENLIAKKGDTPLCITPDLIAVL CCEEEEEEHHHCCCCCCCCEEEEECCCCCCCEEEEEECCCEEEECCCCCEEECCCEEEEE DLETGFPITTERIKYGSRVMVVAFPCNEKWRTEKGIETVGPGYFGYDVEYKTVEELQGK EECCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA