| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699315
Identifier: 126699315
GI number: 126699315
Start: 1983453
End: 1984820
Strand: Direct
Name: 126699315
Synonym: CD1708
Alternate gene names: NA
Gene position: 1983453-1984820 (Clockwise)
Preceding gene: 126699314
Following gene: 126699316
Centisome position: 46.23
GC content: 23.98
Gene sequence:
>1368_bases ATGGGATTAAAAGAATTTGATTTTATTGAAGAGTCTATTGATATGTTGAGGACAATGTCACCAACATTAGAAACTATATC AGATGAAATAGAAGAGTATTTTGAAAATATCTTGGATGAAAAGAATCAAGAATATATAAATGTAACCTCTAGAATAAAAT CAGAATCAAGTTTAAGAGAAAAGATAATTAGAAATAGATATTTAAAAAAATATGGAGAAGCAAGTAATCTTATTCATAAT GTTTCTGACTTAATAGGCCTAAGAATTGAGTGTAGATTTATTGAGGATGAAAACAAAATATATAGACTTTTGAGAAGATA TTTTAATAAAACAGATGACAAAATAAACTATTATAATAAAGAGAATAAGAATATTAAATTAAAACTATCTGAGAGACAAC CCAATAAGCAAAAAAATGGATTTGAAATATATAAAATAGATGGAGTTTTTGCGTATTTAGATAGAGAAGTAAAATTTGAA CTTCAAATTAAATCTCTTGTAAATGTGTTTTGGAGTGAAATAGAACATAAAATAATTTATAAAAACAATACATATTTACT TGCTGATAAATTTATAAAGGATATGATGGACTCTATAAAGAATAATCTTACTATGATAGATAATCAGCTTTTAAGTATTT ATAAAAACTTTCATTCAGGGAAGTCTTTTAATATGAAAGTAAGTAAAAAAGAAATTGAAAAATTATTTGCGAAATTAGTC TATGACGCTTTTTCTGAAAAGATGAATAAAAGTATAGGTTTTGTTGTAGATTTTAAAAAACCATGTGAGACTATATTGAA CTATTCTTTTAATAAACAAGATATAAGTGATGAAGTTTTAGGTAATTTTATGCTTGATGAGTTTGCAAGATTAAATGAAA TTGTAAACAAGGATATAGATTTTAATGAGCAAATAGAATTTGAAAGAGAACCAACATTTGATGATAAGTTTTGTAAAGAC CTAGGAAATCATTTTAGAAGTAGATTAAACACAGAATTTCCATGGAACCTATTTTTTAGAATATTATTTGAAATAGAGCC ATATAACAATACCAAAGACTTTGAAAACTTTGTAGAGTTTATAAAAGAAAATGTGCTACTAGAAGAAAATAGGGAGCAAT TATTATGCCAATTTGAAGAGGATAGTAAGCTTATAATTGAAGATATATATGATTGTATATTTAATAGTATAAGTGAGATT GATAGTGTTGAAATTTTATATAACTATAATCTTGAAAAAATAAACTTTACATCAAGTGAAATCATAAATTGTATATGTAG AGAATATGAGTGTTATGGTGAATACTTAGAAGAAAAAGAAAAGCTTATGAATACATTTAAAGAAAAGATTATTCAAATCT TTGAGTAA
Upstream 100 bases:
>100_bases TACTTACTTATGATAGGAAAAAATGTTAAAATAATAGTGTAATCAAATATAAAGGACTGAAATAATTAACAGTTATTAAA TATTAGGAGTGTAAAAATTT
Downstream 100 bases:
>100_bases TAGGTTAATGCTGAAGTGGCGCTAATGCGCCATTTTTCAAATATATATGAATTAAGTAAAATTATTTTGGAGGAGGCGAT TTGTATAGAGAAAACAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MGLKEFDFIEESIDMLRTMSPTLETISDEIEEYFENILDEKNQEYINVTSRIKSESSLREKIIRNRYLKKYGEASNLIHN VSDLIGLRIECRFIEDENKIYRLLRRYFNKTDDKINYYNKENKNIKLKLSERQPNKQKNGFEIYKIDGVFAYLDREVKFE LQIKSLVNVFWSEIEHKIIYKNNTYLLADKFIKDMMDSIKNNLTMIDNQLLSIYKNFHSGKSFNMKVSKKEIEKLFAKLV YDAFSEKMNKSIGFVVDFKKPCETILNYSFNKQDISDEVLGNFMLDEFARLNEIVNKDIDFNEQIEFEREPTFDDKFCKD LGNHFRSRLNTEFPWNLFFRILFEIEPYNNTKDFENFVEFIKENVLLEENREQLLCQFEEDSKLIIEDIYDCIFNSISEI DSVEILYNYNLEKINFTSSEIINCICREYECYGEYLEEKEKLMNTFKEKIIQIFE
Sequences:
>Translated_455_residues MGLKEFDFIEESIDMLRTMSPTLETISDEIEEYFENILDEKNQEYINVTSRIKSESSLREKIIRNRYLKKYGEASNLIHN VSDLIGLRIECRFIEDENKIYRLLRRYFNKTDDKINYYNKENKNIKLKLSERQPNKQKNGFEIYKIDGVFAYLDREVKFE LQIKSLVNVFWSEIEHKIIYKNNTYLLADKFIKDMMDSIKNNLTMIDNQLLSIYKNFHSGKSFNMKVSKKEIEKLFAKLV YDAFSEKMNKSIGFVVDFKKPCETILNYSFNKQDISDEVLGNFMLDEFARLNEIVNKDIDFNEQIEFEREPTFDDKFCKD LGNHFRSRLNTEFPWNLFFRILFEIEPYNNTKDFENFVEFIKENVLLEENREQLLCQFEEDSKLIIEDIYDCIFNSISEI DSVEILYNYNLEKINFTSSEIINCICREYECYGEYLEEKEKLMNTFKEKIIQIFE >Mature_454_residues GLKEFDFIEESIDMLRTMSPTLETISDEIEEYFENILDEKNQEYINVTSRIKSESSLREKIIRNRYLKKYGEASNLIHNV SDLIGLRIECRFIEDENKIYRLLRRYFNKTDDKINYYNKENKNIKLKLSERQPNKQKNGFEIYKIDGVFAYLDREVKFEL QIKSLVNVFWSEIEHKIIYKNNTYLLADKFIKDMMDSIKNNLTMIDNQLLSIYKNFHSGKSFNMKVSKKEIEKLFAKLVY DAFSEKMNKSIGFVVDFKKPCETILNYSFNKQDISDEVLGNFMLDEFARLNEIVNKDIDFNEQIEFEREPTFDDKFCKDL GNHFRSRLNTEFPWNLFFRILFEIEPYNNTKDFENFVEFIKENVLLEENREQLLCQFEEDSKLIIEDIYDCIFNSISEID SVEILYNYNLEKINFTSSEIINCICREYECYGEYLEEKEKLMNTFKEKIIQIFE
Specific function: Unknown
COG id: COG2357
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54846; Mature: 54715
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLKEFDFIEESIDMLRTMSPTLETISDEIEEYFENILDEKNQEYINVTSRIKSESSLRE CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHH KIIRNRYLKKYGEASNLIHNVSDLIGLRIECRFIEDENKIYRLLRRYFNKTDDKINYYNK HHHHHHHHHHHCHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCC ENKNIKLKLSERQPNKQKNGFEIYKIDGVFAYLDREVKFELQIKSLVNVFWSEIEHKIIY CCCEEEEEECCCCCCCCCCCEEEEEECCCHHHHCCHHEEEHHHHHHHHHHHHHHCCEEEE KNNTYLLADKFIKDMMDSIKNNLTMIDNQLLSIYKNFHSGKSFNMKVSKKEIEKLFAKLV ECCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHH YDAFSEKMNKSIGFVVDFKKPCETILNYSFNKQDISDEVLGNFMLDEFARLNEIVNKDID HHHHHHHHCCCCCEEEECHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC FNEQIEFEREPTFDDKFCKDLGNHFRSRLNTEFPWNLFFRILFEIEPYNNTKDFENFVEF CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCCCHHHHHHHH IKENVLLEENREQLLCQFEEDSKLIIEDIYDCIFNSISEIDSVEILYNYNLEKINFTSSE HHHCCHHHCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCHHH IINCICREYECYGEYLEEKEKLMNTFKEKIIQIFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GLKEFDFIEESIDMLRTMSPTLETISDEIEEYFENILDEKNQEYINVTSRIKSESSLRE CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHH KIIRNRYLKKYGEASNLIHNVSDLIGLRIECRFIEDENKIYRLLRRYFNKTDDKINYYNK HHHHHHHHHHHCHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCC ENKNIKLKLSERQPNKQKNGFEIYKIDGVFAYLDREVKFELQIKSLVNVFWSEIEHKIIY CCCEEEEEECCCCCCCCCCCEEEEEECCCHHHHCCHHEEEHHHHHHHHHHHHHHCCEEEE KNNTYLLADKFIKDMMDSIKNNLTMIDNQLLSIYKNFHSGKSFNMKVSKKEIEKLFAKLV ECCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHH YDAFSEKMNKSIGFVVDFKKPCETILNYSFNKQDISDEVLGNFMLDEFARLNEIVNKDID HHHHHHHHCCCCCEEEECHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC FNEQIEFEREPTFDDKFCKDLGNHFRSRLNTEFPWNLFFRILFEIEPYNNTKDFENFVEF CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCCCHHHHHHHH IKENVLLEENREQLLCQFEEDSKLIIEDIYDCIFNSISEIDSVEILYNYNLEKINFTSSE HHHCCHHHCCHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCHHH IINCICREYECYGEYLEEKEKLMNTFKEKIIQIFE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA