| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is thiE2 [H]
Identifier: 126699313
GI number: 126699313
Start: 1980665
End: 1981354
Strand: Direct
Name: thiE2 [H]
Synonym: CD1706
Alternate gene names: 126699313
Gene position: 1980665-1981354 (Clockwise)
Preceding gene: 126699312
Following gene: 126699314
Centisome position: 46.17
GC content: 22.32
Gene sequence:
>690_bases ATGTATCTGATAACAAACAGAAAATTATGTAGTGAGGAACGATATTTAGAAGTTATTAAAGAGTCTATATTGAGTGGTGT AGAAAATATAATAATAAGAGAAAAGGATTTGGAATATCAAGAGCTAAGAAAATTATATATGAAAATAAAAACTAAAATCA ATTGTATAGATTTTCAAGAGCAAATATCAGATGAAAGTTTGAAAACTAATATAAATCAAAAAGAGTGTAGAAATAAATTC AAGGTTAATTTTATAATAAATAGTAACATTGAATTTTTTGAAAAAGTGGATTGTCAAGGTATCCATCTTCCTTTTAAATT ATTCTTGAATTTAATTGAAAATAAGTATAATTTTAATGAAAATAAAATACTAGGATTATCTTTACATAAAGTAGAGGAAG TAGATTATTTAGAAAAATTAATAAGAAATCAAAATATAAAAATAGATTACATAACATTATCACATATATATGAAACTAAA TGTAAAGAAGGATTAAATCCAAAAGGAATTGAGCTTTTAAAAGAAGCTAAAAAGATTACTGATATTAAAATAATTGCACT TGGGGGAATTTTACCATCTAATGTCAAGGAAACATTAAAATACTGTGATGATTTTGCTATAATGTCAACTATAATGAGGT CTAAAGATATTAAAAAAACCATATCAAATTATAATGAAAAGTTGAATTAG
Upstream 100 bases:
>100_bases TCAATTTAAGATAAATGATGAAAGTACTGTTAAAGATGTGGAGAAAATGCTAAACTCAATTGGTTATCAGCATGTGTTTA AAGATTGGGAAAGATTTTAA
Downstream 100 bases:
>100_bases TAAATATAGTATATTGAATTTTTAACTTAAATAAAAATAAAAAAGTTATCTTTTAAATTTTAAAAGGTAGCTTTTTTATT TTATATCTTTGCTAATAAAA
Product: thiamine biosynthesis protein
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MYLITNRKLCSEERYLEVIKESILSGVENIIIREKDLEYQELRKLYMKIKTKINCIDFQEQISDESLKTNINQKECRNKF KVNFIINSNIEFFEKVDCQGIHLPFKLFLNLIENKYNFNENKILGLSLHKVEEVDYLEKLIRNQNIKIDYITLSHIYETK CKEGLNPKGIELLKEAKKITDIKIIALGGILPSNVKETLKYCDDFAIMSTIMRSKDIKKTISNYNEKLN
Sequences:
>Translated_229_residues MYLITNRKLCSEERYLEVIKESILSGVENIIIREKDLEYQELRKLYMKIKTKINCIDFQEQISDESLKTNINQKECRNKF KVNFIINSNIEFFEKVDCQGIHLPFKLFLNLIENKYNFNENKILGLSLHKVEEVDYLEKLIRNQNIKIDYITLSHIYETK CKEGLNPKGIELLKEAKKITDIKIIALGGILPSNVKETLKYCDDFAIMSTIMRSKDIKKTISNYNEKLN >Mature_229_residues MYLITNRKLCSEERYLEVIKESILSGVENIIIREKDLEYQELRKLYMKIKTKINCIDFQEQISDESLKTNINQKECRNKF KVNFIINSNIEFFEKVDCQGIHLPFKLFLNLIENKYNFNENKILGLSLHKVEEVDYLEKLIRNQNIKIDYITLSHIYETK CKEGLNPKGIELLKEAKKITDIKIIALGGILPSNVKETLKYCDDFAIMSTIMRSKDIKKTISNYNEKLN
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 27014; Mature: 27014
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLITNRKLCSEERYLEVIKESILSGVENIIIREKDLEYQELRKLYMKIKTKINCIDFQE CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEECHHH QISDESLKTNINQKECRNKFKVNFIINSNIEFFEKVDCQGIHLPFKLFLNLIENKYNFNE HHCCHHHHCCCCHHHHCCCEEEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC NKILGLSLHKVEEVDYLEKLIRNQNIKIDYITLSHIYETKCKEGLNPKGIELLKEAKKIT CEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHC DIKIIALGGILPSNVKETLKYCDDFAIMSTIMRSKDIKKTISNYNEKLN CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYLITNRKLCSEERYLEVIKESILSGVENIIIREKDLEYQELRKLYMKIKTKINCIDFQE CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEECHHH QISDESLKTNINQKECRNKFKVNFIINSNIEFFEKVDCQGIHLPFKLFLNLIENKYNFNE HHCCHHHHCCCCHHHHCCCEEEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC NKILGLSLHKVEEVDYLEKLIRNQNIKIDYITLSHIYETKCKEGLNPKGIELLKEAKKIT CEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHC DIKIIALGGILPSNVKETLKYCDDFAIMSTIMRSKDIKKTISNYNEKLN CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12552129 [H]