| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is yceC [H]
Identifier: 126699240
GI number: 126699240
Start: 1895700
End: 1896329
Strand: Direct
Name: yceC [H]
Synonym: CD1636
Alternate gene names: 126699240
Gene position: 1895700-1896329 (Clockwise)
Preceding gene: 126699239
Following gene: 126699241
Centisome position: 44.19
GC content: 31.27
Gene sequence:
>630_bases ATGTCGATTAATTTATCAAAAGGTGATAAAATAGATTTAAAAAAATCTAACCCAGGACTGAGTAACATACTTGTAGGTCT AGGATGGGACCCTGTGCAACAATCTGGAGGAGGTTTTTTTAAATCGTTATTTGGTGGAGGACAAGCTGATATAGATTGTG ATGCATCTGTATTTATGCTTAATCAAGAAGGTAAATTAAGTGGAATAAAAGATTTAATTTATTTTGGAAATCTAAAAAGT GCCTGTAAATCAGTTTTGCATACAGGAGACAATCTAACTGGTGAGGGTACAGGTGATGATGAACAAATCCTAGTTAATTT GGATAAAGTTCCATCAAATATTCATAAATTATTGTTTGTGGTAAATATATACAATTGTGTAGATAGAAAACAACACTTTG GAATGATAGAAAATGCCTATATAAGAGTTGAAGACCAAGGTAATAAGAAAGAGATAGCAAAATACAATCTATCTGATAAT TATTCTGAAAAAACTACTCTTATAGTAGGAGCTATATATAGAAAAGATGGAAGTTGGCAATTTAAAGCAATTGGTGAAGG AACAAAAGATGCGGGTCTTAAAGAAGTAATGCAAAATTTAGACAGGATTGAGTGTGCATATGGAATTTAA
Upstream 100 bases:
>100_bases GGCTTAAATGTTTAATTTAAGCAATATAATATATTAAATATAAATAACCTATACAAATAATGTATAGGTTATATTATATA AAATTTTGTGGAGGTTTAGT
Downstream 100 bases:
>100_bases TAATGATATCAAATATTATAATGTAGATAAAGAAGAAGTTACAAAAGACTTATCTGTTAATCCTGAAAAAGGTTTATCAG AATCAGAAGTCAAGACTAGA
Product: tellurium resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSINLSKGDKIDLKKSNPGLSNILVGLGWDPVQQSGGGFFKSLFGGGQADIDCDASVFMLNQEGKLSGIKDLIYFGNLKS ACKSVLHTGDNLTGEGTGDDEQILVNLDKVPSNIHKLLFVVNIYNCVDRKQHFGMIENAYIRVEDQGNKKEIAKYNLSDN YSEKTTLIVGAIYRKDGSWQFKAIGEGTKDAGLKEVMQNLDRIECAYGI
Sequences:
>Translated_209_residues MSINLSKGDKIDLKKSNPGLSNILVGLGWDPVQQSGGGFFKSLFGGGQADIDCDASVFMLNQEGKLSGIKDLIYFGNLKS ACKSVLHTGDNLTGEGTGDDEQILVNLDKVPSNIHKLLFVVNIYNCVDRKQHFGMIENAYIRVEDQGNKKEIAKYNLSDN YSEKTTLIVGAIYRKDGSWQFKAIGEGTKDAGLKEVMQNLDRIECAYGI >Mature_208_residues SINLSKGDKIDLKKSNPGLSNILVGLGWDPVQQSGGGFFKSLFGGGQADIDCDASVFMLNQEGKLSGIKDLIYFGNLKSA CKSVLHTGDNLTGEGTGDDEQILVNLDKVPSNIHKLLFVVNIYNCVDRKQHFGMIENAYIRVEDQGNKKEIAKYNLSDNY SEKTTLIVGAIYRKDGSWQFKAIGEGTKDAGLKEVMQNLDRIECAYGI
Specific function: Unknown
COG id: COG2310
COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CAPAB/TerDEXZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019303 - InterPro: IPR003325 [H]
Pfam domain/function: PF10138 Tellurium_res; PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 22919; Mature: 22788
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINLSKGDKIDLKKSNPGLSNILVGLGWDPVQQSGGGFFKSLFGGGQADIDCDASVFML CCCCCCCCCEEEEECCCCCHHHEEEECCCCHHHHCCCHHHHHHHCCCCCCCCCCCEEEEE NQEGKLSGIKDLIYFGNLKSACKSVLHTGDNLTGEGTGDDEQILVNLDKVPSNIHKLLFV ECCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHH VNIYNCVDRKQHFGMIENAYIRVEDQGNKKEIAKYNLSDNYSEKTTLIVGAIYRKDGSWQ HHHHHHHHHHHHCCCEECEEEEEECCCCHHHEEEECCCCCCCCCEEEEEEEEEECCCCEE FKAIGEGTKDAGLKEVMQNLDRIECAYGI EEEECCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SINLSKGDKIDLKKSNPGLSNILVGLGWDPVQQSGGGFFKSLFGGGQADIDCDASVFML CCCCCCCCEEEEECCCCCHHHEEEECCCCHHHHCCCHHHHHHHCCCCCCCCCCCEEEEE NQEGKLSGIKDLIYFGNLKSACKSVLHTGDNLTGEGTGDDEQILVNLDKVPSNIHKLLFV ECCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHH VNIYNCVDRKQHFGMIENAYIRVEDQGNKKEIAKYNLSDNYSEKTTLIVGAIYRKDGSWQ HHHHHHHHHHHHCCCEECEEEEEECCCCHHHEEEECCCCCCCCCEEEEEEEEEECCCCEE FKAIGEGTKDAGLKEVMQNLDRIECAYGI EEEECCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 8755892 [H]