| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is kdpC
Identifier: 126699197
GI number: 126699197
Start: 1848789
End: 1849415
Strand: Direct
Name: kdpC
Synonym: CD1593
Alternate gene names: 126699197
Gene position: 1848789-1849415 (Clockwise)
Preceding gene: 126699196
Following gene: 126699198
Centisome position: 43.09
GC content: 31.9
Gene sequence:
>627_bases ATGAAAACATTAAAGCCAGCATTACTTGTAAGTATTGTATTGTTAGTTGTTTGTGGACTTGTATATCCACTTGTTTTGAC AGGTGTAAGTCAAGTTGCATTTAAAGATAAAGCCAATGGAAGTATGATAGAAGTAAATGGTGTAAAAGTAGGTTCAGAAC TTATTGGTCAAAGCTTTACAGATGCGAGATTCTTTAAGGGAAGAGTATCATCAGTAAACTATAATACTTATACAAAAGAA GATTTAGTACCAGATAAAGATGGAAATACATCTTATGGAGGTGTATCATCAGGGTCTTTTAATTATGGAGCTACAAATCC AGAACTTCATGATAGAGTACAAAAAGATATAGAAAAGTTTTTAAAGGATAATCCAACTGTCAAAAGAGAGGATATACCAA CAGATTTACTTACAGCATCAGGTTCAGGACTTGACCCTAATATAAGTCCAGCCTCTGCAAAAATTCAGATACCAGCTATA GCAAAAGCGTCTGGAATATCAGAAAGTAAATTACAAAAAATTGTAGATGATAATACTTCCAAAAAACTTTTTGGAGTTTT AGGTGAAGATAGAGTTAATGTATTAAAAGTTAATGTAGAGGTCGCAAAAATATTAGGTCTTATATAG
Upstream 100 bases:
>100_bases TGGAGTTATAGTACCATTTTTAGGAATAAAATTAATTGATTTATTGATTACACCTTTAGTAATGGTTCTTAATTTAGGTT AATAAATGGAGGATATAAAA
Downstream 100 bases:
>100_bases TATTTTGTGGAATTTTAGCAACAAAATATTACGCAAGATTTAATTTAAAGGTTAAATTTTAAAGAGTGAAAATCGATAAT GATTTTCACTTTTTTATTTG
Product: potassium-transporting ATPase subunit C
Products: NA
Alternate protein names: ATP phosphohydrolase [potassium-transporting] C chain; Potassium-binding and translocating subunit C; Potassium-translocating ATPase C chain
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MKTLKPALLVSIVLLVVCGLVYPLVLTGVSQVAFKDKANGSMIEVNGVKVGSELIGQSFTDARFFKGRVSSVNYNTYTKE DLVPDKDGNTSYGGVSSGSFNYGATNPELHDRVQKDIEKFLKDNPTVKREDIPTDLLTASGSGLDPNISPASAKIQIPAI AKASGISESKLQKIVDDNTSKKLFGVLGEDRVNVLKVNVEVAKILGLI
Sequences:
>Translated_208_residues MKTLKPALLVSIVLLVVCGLVYPLVLTGVSQVAFKDKANGSMIEVNGVKVGSELIGQSFTDARFFKGRVSSVNYNTYTKE DLVPDKDGNTSYGGVSSGSFNYGATNPELHDRVQKDIEKFLKDNPTVKREDIPTDLLTASGSGLDPNISPASAKIQIPAI AKASGISESKLQKIVDDNTSKKLFGVLGEDRVNVLKVNVEVAKILGLI >Mature_208_residues MKTLKPALLVSIVLLVVCGLVYPLVLTGVSQVAFKDKANGSMIEVNGVKVGSELIGQSFTDARFFKGRVSSVNYNTYTKE DLVPDKDGNTSYGGVSSGSFNYGATNPELHDRVQKDIEKFLKDNPTVKREDIPTDLLTASGSGLDPNISPASAKIQIPAI AKASGISESKLQKIVDDNTSKKLFGVLGEDRVNVLKVNVEVAKILGLI
Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex
COG id: COG2156
COG function: function code P; K+-transporting ATPase, c chain
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kdpC family
Homologues:
Organism=Escherichia coli, GI1786913, Length=204, Percent_Identity=34.3137254901961, Blast_Score=117, Evalue=7e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATKC_CLOD6 (Q186E8)
Other databases:
- EMBL: AM180355 - RefSeq: YP_001088094.1 - STRING: Q186E8 - GeneID: 4914786 - GenomeReviews: AM180355_GR - KEGG: cdf:CD1593 - NMPDR: fig|1496.1.peg.3325 - eggNOG: COG2156 - HOGENOM: HBG724180 - OMA: GSNNYAP - ProtClustDB: PRK13995 - HAMAP: MF_00276 - InterPro: IPR003820 - PIRSF: PIRSF001296 - TIGRFAMs: TIGR00681
Pfam domain/function: PF02669 KdpC
EC number: =3.6.3.12
Molecular weight: Translated: 22242; Mature: 22242
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x51cfa888)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLKPALLVSIVLLVVCGLVYPLVLTGVSQVAFKDKANGSMIEVNGVKVGSELIGQSFT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEECHHHHCCCCC DARFFKGRVSSVNYNTYTKEDLVPDKDGNTSYGGVSSGSFNYGATNPELHDRVQKDIEKF HHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LKDNPTVKREDIPTDLLTASGSGLDPNISPASAKIQIPAIAKASGISESKLQKIVDDNTS HHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEECCCHHCCCCCCHHHHHHHHCCCCC KKLFGVLGEDRVNVLKVNVEVAKILGLI HHHHHHCCCCCEEEEEECHHHHHHHCCH >Mature Secondary Structure MKTLKPALLVSIVLLVVCGLVYPLVLTGVSQVAFKDKANGSMIEVNGVKVGSELIGQSFT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEECHHHHCCCCC DARFFKGRVSSVNYNTYTKEDLVPDKDGNTSYGGVSSGSFNYGATNPELHDRVQKDIEKF HHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LKDNPTVKREDIPTDLLTASGSGLDPNISPASAKIQIPAIAKASGISESKLQKIVDDNTS HHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEECCCHHCCCCCCHHHHHHHHCCCCC KKLFGVLGEDRVNVLKVNVEVAKILGLI HHHHHHCCCCCEEEEEECHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA