Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699190

Identifier: 126699190

GI number: 126699190

Start: 1838809

End: 1839993

Strand: Direct

Name: 126699190

Synonym: CD1586

Alternate gene names: NA

Gene position: 1838809-1839993 (Clockwise)

Preceding gene: 126699189

Following gene: 126699191

Centisome position: 42.86

GC content: 24.64

Gene sequence:

>1185_bases
ATGGATAGAAAAAAGGTAATAGTACAAATTTTTACTGGAGGTTTTAAGGCTAAAGAAATAAAGTTTAATGATATAAAATG
TAAACTACTAGAATTATTGGACTGTATTGATATAGAAAAGGTTATCATGGGATGGAGTGTAGATGAAGAATTATATGTAG
AAACTAAAAAACTATTAAATAAATATAATGTTGAACTATATCTTTGGTTGCCATGTTTTTCTGAAATAGGATTACTTGAA
AAAAGTAATTTACTAATTGATTATATGGGGAAGGAAGTCAAGGGCTATGCTTTACAAGAGGATGAAAATTTTGAGTTTTA
TTGCCCAAATAATAAGGAAAATATAAAAAATATAAAGAAAATATATAGTACTTATTTTAGTGATATTAAATTTGATGGAA
TTTTTTTAGATAAAATAAGGTATGGTTCTTTTTCGAATAAACTAAATGGTGTTTTTAATTGTTTTTGTAAAGATTGTTTA
AATATATATGAAAAAAATAATATTGATAAAGAGTCGTTAATGAGAGAAATGAATAATGTGTCTAAGGGAGTTATAGATAA
TGAAGATACTCCATTTGGTATAACAGAATACATTAATGGAAAATACAAATTTAAAAATAAAATATGGGAAGATTTTTTTG
AAACAAAAAATCAAAATATATACAAGGCATTATTAGAGATAAGTAGTTATTTTAAAAGTAAGGGATTGAAAATAGGTATA
GATACTTTTTCTCCTTTTATTTCTTACTTTACAGGTCAAGATTTAGAAAAATTACAAGAAGTAGCAGATTTTATAAAACC
AATGATGTATAGAACTACAAAAGCTCCAGCTGGTTTACCATTTGAATTTGAAAGGTTTATTGATGAATCCATACATAAGA
ATAAAGAGATTGGAAAAAGAAATTTCTTAGATATTTTAGGAATTAAGGAGTATGAAGGAGATGTATATCCTATAGAATTT
GTACTAGAGGAAATCGATTTTATGACAAGAAATCTTAATAAAGATATATATGTAGGAGTTGAAATAAATAAAAAGGAAAT
TATATCTCCTGTTACACCTAAGTACATAAGTGAAAATATTTCAAATATAAATAAGACAACAGTAAAAGGATATGTTTTAT
CTTGGGATTTGTTGTCAGCACCAAAAGAAAATATTGATGAAATTATAAAATGGTTTCGGAATTAG

Upstream 100 bases:

>100_bases
GAAAATACAGATAAAAATTTAAAATTTATATCTCAAGAAAATCAGCCAGTATATGGGGGGATAAGACTTGCTATGGCATT
AGCTAATAGGAGGGTCAAGC

Downstream 100 bases:

>100_bases
TGAGGTGATAAAGTGAGTAAGATATTGGAAATGCAACAAATATATAAAAGTTTTGGAAAGGTAGATGTTTTAAAAGGGAT
AAATTTTGAGTTAGAAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MDRKKVIVQIFTGGFKAKEIKFNDIKCKLLELLDCIDIEKVIMGWSVDEELYVETKKLLNKYNVELYLWLPCFSEIGLLE
KSNLLIDYMGKEVKGYALQEDENFEFYCPNNKENIKNIKKIYSTYFSDIKFDGIFLDKIRYGSFSNKLNGVFNCFCKDCL
NIYEKNNIDKESLMREMNNVSKGVIDNEDTPFGITEYINGKYKFKNKIWEDFFETKNQNIYKALLEISSYFKSKGLKIGI
DTFSPFISYFTGQDLEKLQEVADFIKPMMYRTTKAPAGLPFEFERFIDESIHKNKEIGKRNFLDILGIKEYEGDVYPIEF
VLEEIDFMTRNLNKDIYVGVEINKKEIISPVTPKYISENISNINKTTVKGYVLSWDLLSAPKENIDEIIKWFRN

Sequences:

>Translated_394_residues
MDRKKVIVQIFTGGFKAKEIKFNDIKCKLLELLDCIDIEKVIMGWSVDEELYVETKKLLNKYNVELYLWLPCFSEIGLLE
KSNLLIDYMGKEVKGYALQEDENFEFYCPNNKENIKNIKKIYSTYFSDIKFDGIFLDKIRYGSFSNKLNGVFNCFCKDCL
NIYEKNNIDKESLMREMNNVSKGVIDNEDTPFGITEYINGKYKFKNKIWEDFFETKNQNIYKALLEISSYFKSKGLKIGI
DTFSPFISYFTGQDLEKLQEVADFIKPMMYRTTKAPAGLPFEFERFIDESIHKNKEIGKRNFLDILGIKEYEGDVYPIEF
VLEEIDFMTRNLNKDIYVGVEINKKEIISPVTPKYISENISNINKTTVKGYVLSWDLLSAPKENIDEIIKWFRN
>Mature_394_residues
MDRKKVIVQIFTGGFKAKEIKFNDIKCKLLELLDCIDIEKVIMGWSVDEELYVETKKLLNKYNVELYLWLPCFSEIGLLE
KSNLLIDYMGKEVKGYALQEDENFEFYCPNNKENIKNIKKIYSTYFSDIKFDGIFLDKIRYGSFSNKLNGVFNCFCKDCL
NIYEKNNIDKESLMREMNNVSKGVIDNEDTPFGITEYINGKYKFKNKIWEDFFETKNQNIYKALLEISSYFKSKGLKIGI
DTFSPFISYFTGQDLEKLQEVADFIKPMMYRTTKAPAGLPFEFERFIDESIHKNKEIGKRNFLDILGIKEYEGDVYPIEF
VLEEIDFMTRNLNKDIYVGVEINKKEIISPVTPKYISENISNINKTTVKGYVLSWDLLSAPKENIDEIIKWFRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46317; Mature: 46317

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS00037 MYB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRKKVIVQIFTGGFKAKEIKFNDIKCKLLELLDCIDIEKVIMGWSVDEELYVETKKLLN
CCCCEEEEEEECCCCEECEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KYNVELYLWLPCFSEIGLLEKSNLLIDYMGKEVKGYALQEDENFEFYCPNNKENIKNIKK
HHCCEEEEEECCHHHCCCCCCCCCHHEECCCCCCCCEECCCCCEEEECCCCHHHHHHHHH
IYSTYFSDIKFDGIFLDKIRYGSFSNKLNGVFNCFCKDCLNIYEKNNIDKESLMREMNNV
HHHHHHHCCCCCCEEEECEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
SKGVIDNEDTPFGITEYINGKYKFKNKIWEDFFETKNQNIYKALLEISSYFKSKGLKIGI
HCCCCCCCCCCCCHHHHHCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEH
DTFSPFISYFTGQDLEKLQEVADFIKPMMYRTTKAPAGLPFEFERFIDESIHKNKEIGKR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCCCH
NFLDILGIKEYEGDVYPIEFVLEEIDFMTRNLNKDIYVGVEINKKEIISPVTPKYISENI
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHCCCCCHHHHHHHH
SNINKTTVKGYVLSWDLLSAPKENIDEIIKWFRN
HCCCHHHHEEEEEEEHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MDRKKVIVQIFTGGFKAKEIKFNDIKCKLLELLDCIDIEKVIMGWSVDEELYVETKKLLN
CCCCEEEEEEECCCCEECEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KYNVELYLWLPCFSEIGLLEKSNLLIDYMGKEVKGYALQEDENFEFYCPNNKENIKNIKK
HHCCEEEEEECCHHHCCCCCCCCCHHEECCCCCCCCEECCCCCEEEECCCCHHHHHHHHH
IYSTYFSDIKFDGIFLDKIRYGSFSNKLNGVFNCFCKDCLNIYEKNNIDKESLMREMNNV
HHHHHHHCCCCCCEEEECEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
SKGVIDNEDTPFGITEYINGKYKFKNKIWEDFFETKNQNIYKALLEISSYFKSKGLKIGI
HCCCCCCCCCCCCHHHHHCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEH
DTFSPFISYFTGQDLEKLQEVADFIKPMMYRTTKAPAGLPFEFERFIDESIHKNKEIGKR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCCCH
NFLDILGIKEYEGDVYPIEFVLEEIDFMTRNLNKDIYVGVEINKKEIISPVTPKYISENI
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHCCCCCHHHHHHHH
SNINKTTVKGYVLSWDLLSAPKENIDEIIKWFRN
HCCCHHHHEEEEEEEHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA