Click here to switch to the map view.

The map label for this gene is yfkH [H]

Identifier: 126699181

GI number: 126699181

Start: 1827640

End: 1828479

Strand: Direct

Name: yfkH [H]

Synonym: CD1578

Alternate gene names: 126699181

Gene position: 1827640-1828479 (Clockwise)

Preceding gene: 126699180

Following gene: 126699182

Centisome position: 42.6

GC content: 25.95

Gene sequence:

>840_bases
ATGTTTGGTATAGATAAGAAATTGATTGAATATATAATTGCAAAATCCAATTACAGTGAATTAAGTTCAAAGTCAGCAGA
AGTATCTTTCTTCTTAATGTTGTCCATATTTCCTTTTTTAATATTTACAATAAGTTCTATAGCTTATATACCGATTCTTC
ATTTAAATAAGTATATAGCTTTGTTTAGAAATATGATGCCAGAAGGTGCTTTTGCTGTGTTATCTTCAATCATAGTTTCT
GCAATAGACAATAGAAACCTGAAATTTTTAGCAGTCAGTTTTGTACTTACTATGTGGACATTTTCAAGAGCAGTAAAAGC
TATTATTAAAGGAATGAATAGAGCCTATAAAGTTAAAGAAACTAGGTCTTTTTTTAAAATTTTATCTATATCATTTTTAT
TTACAATAATGCTTTTGGTCCTTATTTTTTTATCTATGATATTTTTAGTTTACGGGGAAAAAATAGGTTATTTTATTTTT
AATCTTGTAGGATTGGATGAGATATTTATAAAAATATGGGATATTCTAAGATACACTGTAGGTATAATAACAATAATAGT
GATATTTACACTTTTATATAAATACACTCCAAATAAAAAGTTAACTATTAAAGAATCTGCGCCAGGTGCTATTTTTGCTA
CTTTTGCTTGGTTTTTAGTATCATTTTTATATTCTTATTATACAAATTACTATGCTAACTATGAAGTAATCTATGGAAGT
ATAGCTGAAATAATTGTACTTATGACCTGGATGTATTTTAGTAGTTGGTCTATCGTTATTGGCTATGAGGTAAATTCAAG
ATTGTATTTTAGAAAGATAAGACATGAAATGTTAAAGTAA

Upstream 100 bases:

>100_bases
TTATTTGTGTTATTTTTACTTAAATAATTATATTATAGAATGAATCTGAGTATAATTAATATTGTATAATGAAATTAATT
TGATAGAAAAGGGGATATTT

Downstream 100 bases:

>100_bases
AGTATTTAAAATAAAAGAGAGTATTTAGTATTATAAATGTAATTGAATTAATAAAGAAATATTGACATTTAAGTTAAAAA
GTCTAGAATTTTTCTGGGCT

Product: membrane-associated ribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MFGIDKKLIEYIIAKSNYSELSSKSAEVSFFLMLSIFPFLIFTISSIAYIPILHLNKYIALFRNMMPEGAFAVLSSIIVS
AIDNRNLKFLAVSFVLTMWTFSRAVKAIIKGMNRAYKVKETRSFFKILSISFLFTIMLLVLIFLSMIFLVYGEKIGYFIF
NLVGLDEIFIKIWDILRYTVGIITIIVIFTLLYKYTPNKKLTIKESAPGAIFATFAWFLVSFLYSYYTNYYANYEVIYGS
IAEIIVLMTWMYFSSWSIVIGYEVNSRLYFRKIRHEMLK

Sequences:

>Translated_279_residues
MFGIDKKLIEYIIAKSNYSELSSKSAEVSFFLMLSIFPFLIFTISSIAYIPILHLNKYIALFRNMMPEGAFAVLSSIIVS
AIDNRNLKFLAVSFVLTMWTFSRAVKAIIKGMNRAYKVKETRSFFKILSISFLFTIMLLVLIFLSMIFLVYGEKIGYFIF
NLVGLDEIFIKIWDILRYTVGIITIIVIFTLLYKYTPNKKLTIKESAPGAIFATFAWFLVSFLYSYYTNYYANYEVIYGS
IAEIIVLMTWMYFSSWSIVIGYEVNSRLYFRKIRHEMLK
>Mature_279_residues
MFGIDKKLIEYIIAKSNYSELSSKSAEVSFFLMLSIFPFLIFTISSIAYIPILHLNKYIALFRNMMPEGAFAVLSSIIVS
AIDNRNLKFLAVSFVLTMWTFSRAVKAIIKGMNRAYKVKETRSFFKILSISFLFTIMLLVLIFLSMIFLVYGEKIGYFIF
NLVGLDEIFIKIWDILRYTVGIITIIVIFTLLYKYTPNKKLTIKESAPGAIFATFAWFLVSFLYSYYTNYYANYEVIYGS
IAEIIVLMTWMYFSSWSIVIGYEVNSRLYFRKIRHEMLK

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 32572; Mature: 32572

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]