| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is ilvC
Identifier: 126699168
GI number: 126699168
Start: 1811480
End: 1812469
Strand: Direct
Name: ilvC
Synonym: CD1565
Alternate gene names: 126699168
Gene position: 1811480-1812469 (Clockwise)
Preceding gene: 126699167
Following gene: 126699169
Centisome position: 42.22
GC content: 32.42
Gene sequence:
>990_bases ATGGCAAGAATGTATTATGAAAAAGATGTGGATTTAGAGGTTTTAAAAAATAAAAAGGTTGCAGTTTTAGGTTATGGAAG TCAAGGACATGCACATGCACAAAATCTTAGAGATAACGGTGTACATGTAATGATAGGTCTTTATGACGGAAGTAAATCAG CACAAAAAGCAAAAGAAGATGGATTTGAAGTTAAGAGTGTAGCAGAAGCTACAAAAGAAAGTGATTTGACAATGATGTTA ATGCCTGATGAAAAACAAAAGAAAGTTTATGAAGAGAGTGTAAAGGATAACTTAAAAGAAGGTCAGACATTAGCTTTTGC TCATGGATTCAATATACATTATAATCAAGTACAACCACCAGAATTTGTTGATGTTGTAATGGTAGCTCCTAAAGGACCTG GTCACTTAGTTAGAAATGTATTTACAAAGGGAAGTGGAGTTCCTGCACTATTTGCAGTATATCAAGACCACACTAAAAAA GCTACAGAGACAGTTTTAGCATATGCAAAAGGGATAGGAGCAACAAGAGCAGGTGTTTTAGAAACTACTTTTAAAGAAGA AACAGAAACAGATTTATTTGGAGAACAATCAGTACTTTGTGGTGGAATAAGTGAACTTATAAAATTGGGATATAAAACGC TTGTAGATGCAGGTTATCAAAAAGAAGTAGCATATTTTGAATGTTTACATGAAATGAAACTAATAGTCGACCTTATATAT GAAGGTGGATTTGAAAGAATGAGATATAGTATAAGTGACACAGCAGAATATGGAGATTATGTATCTGGTAAAAGAGTAAT AACTGATGCTGCAAAACAAGGTATGCAAAATGTTTTAGAGGATATACAAAATGGAAAATTTGCAAAAGCGTGGATTAAAG AAAATGAAGAAGGACGTGAAAACTTCCTAAAAACTAGAGAAGAAGAATATAATACAGAAATTGCTGAAGTTGGTAGAAAT CTAAGAAGTATGATGTCATTCTTAAAATAA
Upstream 100 bases:
>100_bases TTAAATCTGTTGAATAATATTAAAACAATGATAATGAGTATGAATTTCTAATAAAAATAAATATCATAAAAATAAGAAAA AGTATTGGGAGGAAATGAAA
Downstream 100 bases:
>100_bases ATATATATTAAATGGATTAGTTTGAGGGAAAGAGTGGTGTATAGTAGTGCGTATGAATGGAGCAAAGGTAATTTTAGAAT GTTTAAAGAAAGAGGGAATT
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MARMYYEKDVDLEVLKNKKVAVLGYGSQGHAHAQNLRDNGVHVMIGLYDGSKSAQKAKEDGFEVKSVAEATKESDLTMML MPDEKQKKVYEESVKDNLKEGQTLAFAHGFNIHYNQVQPPEFVDVVMVAPKGPGHLVRNVFTKGSGVPALFAVYQDHTKK ATETVLAYAKGIGATRAGVLETTFKEETETDLFGEQSVLCGGISELIKLGYKTLVDAGYQKEVAYFECLHEMKLIVDLIY EGGFERMRYSISDTAEYGDYVSGKRVITDAAKQGMQNVLEDIQNGKFAKAWIKENEEGRENFLKTREEEYNTEIAEVGRN LRSMMSFLK
Sequences:
>Translated_329_residues MARMYYEKDVDLEVLKNKKVAVLGYGSQGHAHAQNLRDNGVHVMIGLYDGSKSAQKAKEDGFEVKSVAEATKESDLTMML MPDEKQKKVYEESVKDNLKEGQTLAFAHGFNIHYNQVQPPEFVDVVMVAPKGPGHLVRNVFTKGSGVPALFAVYQDHTKK ATETVLAYAKGIGATRAGVLETTFKEETETDLFGEQSVLCGGISELIKLGYKTLVDAGYQKEVAYFECLHEMKLIVDLIY EGGFERMRYSISDTAEYGDYVSGKRVITDAAKQGMQNVLEDIQNGKFAKAWIKENEEGRENFLKTREEEYNTEIAEVGRN LRSMMSFLK >Mature_328_residues ARMYYEKDVDLEVLKNKKVAVLGYGSQGHAHAQNLRDNGVHVMIGLYDGSKSAQKAKEDGFEVKSVAEATKESDLTMMLM PDEKQKKVYEESVKDNLKEGQTLAFAHGFNIHYNQVQPPEFVDVVMVAPKGPGHLVRNVFTKGSGVPALFAVYQDHTKKA TETVLAYAKGIGATRAGVLETTFKEETETDLFGEQSVLCGGISELIKLGYKTLVDAGYQKEVAYFECLHEMKLIVDLIYE GGFERMRYSISDTAEYGDYVSGKRVITDAAKQGMQNVLEDIQNGKFAKAWIKENEEGRENFLKTREEEYNTEIAEVGRNL RSMMSFLK
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family
Homologues:
Organism=Escherichia coli, GI1790210, Length=307, Percent_Identity=32.5732899022801, Blast_Score=140, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6323387, Length=332, Percent_Identity=33.7349397590361, Blast_Score=150, Evalue=3e-37,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ILVC_CLOD6 (Q18C83)
Other databases:
- EMBL: AM180355 - RefSeq: YP_001088065.1 - ProteinModelPortal: Q18C83 - SMR: Q18C83 - STRING: Q18C83 - GeneID: 4913060 - GenomeReviews: AM180355_GR - KEGG: cdf:CD1565 - NMPDR: fig|1496.1.peg.3354 - eggNOG: COG0059 - HOGENOM: HBG286525 - OMA: MAYAKGI - ProtClustDB: CLSK2534938 - HAMAP: MF_00435 - InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - Gene3D: G3DSA:1.10.1040.10 - PANTHER: PTHR21371 - TIGRFAMs: TIGR00465
Pfam domain/function: PF01450 IlvC; PF07991 IlvN; SSF48179 6DGDH_C_like
EC number: =1.1.1.86
Molecular weight: Translated: 36878; Mature: 36747
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: ACT_SITE 108-108
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARMYYEKDVDLEVLKNKKVAVLGYGSQGHAHAQNLRDNGVHVMIGLYDGSKSAQKAKED CCCCCCCCCCCHHHHCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEEECCCCHHHHHHHC GFEVKSVAEATKESDLTMMLMPDEKQKKVYEESVKDNLKEGQTLAFAHGFNIHYNQVQPP CCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCC EFVDVVMVAPKGPGHLVRNVFTKGSGVPALFAVYQDHTKKATETVLAYAKGIGATRAGVL CCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ETTFKEETETDLFGEQSVLCGGISELIKLGYKTLVDAGYQKEVAYFECLHEMKLIVDLIY HHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH EGGFERMRYSISDTAEYGDYVSGKRVITDAAKQGMQNVLEDIQNGKFAKAWIKENEEGRE HCCHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCHHHH NFLKTREEEYNTEIAEVGRNLRSMMSFLK HHHHHHHHHHCCHHHHHHHHHHHHHHHHC >Mature Secondary Structure ARMYYEKDVDLEVLKNKKVAVLGYGSQGHAHAQNLRDNGVHVMIGLYDGSKSAQKAKED CCCCCCCCCCHHHHCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEEECCCCHHHHHHHC GFEVKSVAEATKESDLTMMLMPDEKQKKVYEESVKDNLKEGQTLAFAHGFNIHYNQVQPP CCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCC EFVDVVMVAPKGPGHLVRNVFTKGSGVPALFAVYQDHTKKATETVLAYAKGIGATRAGVL CCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ETTFKEETETDLFGEQSVLCGGISELIKLGYKTLVDAGYQKEVAYFECLHEMKLIVDLIY HHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH EGGFERMRYSISDTAEYGDYVSGKRVITDAAKQGMQNVLEDIQNGKFAKAWIKENEEGRE HCCHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCHHHH NFLKTREEEYNTEIAEVGRNLRSMMSFLK HHHHHHHHHHCCHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA